Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Gm25239-201ENSMUST00000174915 86 ntBASIC43,49■■■■■ 4,55
Tmc1Q8R4P5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42,71■■■■■ 4,43
Tmc1Q8R4P5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41,24■■■■■ 4,19
Tmc1Q8R4P5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41,13■■■■■ 4,18
Tmc1Q8R4P5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,27■■■■■ 4,04
Tmc1Q8R4P5 Psd-208ENSMUST00000224556 2034 ntBASIC40,16■■■■■ 4,02
Tmc1Q8R4P5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39,74■■■■□ 3,95
Tmc1Q8R4P5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC39,56■■■■□ 3,92
Tmc1Q8R4P5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39,01■■■■□ 3,84
Tmc1Q8R4P5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3,83
Tmc1Q8R4P5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38,79■■■■□ 3,8
Tmc1Q8R4P5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC38,35■■■■□ 3,73
Tmc1Q8R4P5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38,33■■■■□ 3,73
Tmc1Q8R4P5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38,29■■■■□ 3,72
Tmc1Q8R4P5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38,18■■■■□ 3,7
Tmc1Q8R4P5 Gm15042-201ENSMUST00000120212 883 ntBASIC37,88■■■■□ 3,65
Tmc1Q8R4P5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37,74■■■■□ 3,63
Tmc1Q8R4P5 Gm24109-201ENSMUST00000175489 103 ntBASIC37,72■■■■□ 3,63
Tmc1Q8R4P5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,7■■■■□ 3,63
Tmc1Q8R4P5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC37,65■■■■□ 3,62
Tmc1Q8R4P5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Tmc1Q8R4P5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,32■■■■□ 3,56
Tmc1Q8R4P5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37,18■■■■□ 3,54
Tmc1Q8R4P5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37,1■■■■□ 3,53
Tmc1Q8R4P5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37,1■■■■□ 3,53
Tmc1Q8R4P5 Gm15045-201ENSMUST00000117359 883 ntBASIC37,01■■■■□ 3,52
Tmc1Q8R4P5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36,84■■■■□ 3,49
Tmc1Q8R4P5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,78■■■■□ 3,48
Tmc1Q8R4P5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36,78■■■■□ 3,48
Tmc1Q8R4P5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36,74■■■■□ 3,47
Tmc1Q8R4P5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,61■■■■□ 3,45
Tmc1Q8R4P5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,58■■■■□ 3,45
Tmc1Q8R4P5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36,58■■■■□ 3,45
Tmc1Q8R4P5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36,56■■■■□ 3,44
Tmc1Q8R4P5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,41■■■■□ 3,42
Tmc1Q8R4P5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,35■■■■□ 3,41
Tmc1Q8R4P5 Gm23366-201ENSMUST00000175022 89 ntBASIC36,33■■■■□ 3,41
Tmc1Q8R4P5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,33■■■■□ 3,41
Tmc1Q8R4P5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36,28■■■■□ 3,4
Tmc1Q8R4P5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,22■■■■□ 3,39
Tmc1Q8R4P5 Gm10524-201ENSMUST00000181931 1893 ntBASIC36,14■■■■□ 3,38
Tmc1Q8R4P5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
Tmc1Q8R4P5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36,09■■■■□ 3,37
Tmc1Q8R4P5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36,03■■■■□ 3,36
Tmc1Q8R4P5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Tmc1Q8R4P5 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,97■■■■□ 3,35
Tmc1Q8R4P5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35,89■■■■□ 3,34
Tmc1Q8R4P5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35,83■■■■□ 3,33
Tmc1Q8R4P5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35,81■■■■□ 3,32
Tmc1Q8R4P5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35,79■■■■□ 3,32
Tmc1Q8R4P5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35,72■■■■□ 3,31
Tmc1Q8R4P5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35,7■■■■□ 3,3
Tmc1Q8R4P5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,66■■■■□ 3,3
Tmc1Q8R4P5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC35,61■■■■□ 3,29
Tmc1Q8R4P5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35,56■■■■□ 3,28
Tmc1Q8R4P5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC35,45■■■■□ 3,27
Tmc1Q8R4P5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,44■■■■□ 3,26
Tmc1Q8R4P5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35,4■■■■□ 3,26
Tmc1Q8R4P5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,23■■■■□ 3,23
Tmc1Q8R4P5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35,2■■■■□ 3,22
Tmc1Q8R4P5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,17■■■■□ 3,22
Tmc1Q8R4P5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC35,16■■■■□ 3,22
Tmc1Q8R4P5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,15■■■■□ 3,22
Tmc1Q8R4P5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Tmc1Q8R4P5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,05■■■■□ 3,2
Tmc1Q8R4P5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,95■■■■□ 3,19
Tmc1Q8R4P5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34,94■■■■□ 3,18
Tmc1Q8R4P5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,92■■■■□ 3,18
Tmc1Q8R4P5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,9■■■■□ 3,18
Tmc1Q8R4P5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,89■■■■□ 3,18
Tmc1Q8R4P5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,88■■■■□ 3,17
Tmc1Q8R4P5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34,87■■■■□ 3,17
Tmc1Q8R4P5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34,8■■■■□ 3,16
Tmc1Q8R4P5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34,79■■■■□ 3,16
Tmc1Q8R4P5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,73■■■■□ 3,15
Tmc1Q8R4P5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,73■■■■□ 3,15
Tmc1Q8R4P5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,67■■■■□ 3,14
Tmc1Q8R4P5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,56■■■■□ 3,12
Tmc1Q8R4P5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,52■■■■□ 3,12
Tmc1Q8R4P5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Tmc1Q8R4P5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Tmc1Q8R4P5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,46■■■■□ 3,11
Tmc1Q8R4P5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34,46■■■■□ 3,11
Tmc1Q8R4P5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34,43■■■■□ 3,1
Tmc1Q8R4P5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC34,43■■■■□ 3,1
Tmc1Q8R4P5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,41■■■■□ 3,1
Tmc1Q8R4P5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,4■■■■□ 3,1
Tmc1Q8R4P5 Gm25238-201ENSMUST00000174914 89 ntBASIC34,37■■■■□ 3,09
Tmc1Q8R4P5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34,37■■■■□ 3,09
Tmc1Q8R4P5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34,35■■■■□ 3,09
Tmc1Q8R4P5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34,31■■■■□ 3,08
Tmc1Q8R4P5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34,26■■■■□ 3,07
Tmc1Q8R4P5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC34,18■■■■□ 3,06
Tmc1Q8R4P5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34,14■■■■□ 3,06
Tmc1Q8R4P5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,12■■■■□ 3,05
Tmc1Q8R4P5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,11■■■■□ 3,05
Tmc1Q8R4P5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34,08■■■■□ 3,05
Tmc1Q8R4P5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC34,07■■■■□ 3,04
Tmc1Q8R4P5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33,91■■■■□ 3,02
Tmc1Q8R4P5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,89■■■■□ 3,02
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms