RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 NischQ80TM9 1593 aa18.51■□□□□ 0.55
Cldn1-201ENSMUST00000023154 Gm35339A0A140LHH9 1649 aa18.35■□□□□ 0.53
Cldn1-201ENSMUST00000023154 Abcc9P70170 1546 aa17.98■□□□□ 0.47
Cldn1-201ENSMUST00000023154 Abcc8B2RUS7 1588 aa17.66■□□□□ 0.42
Cldn1-201ENSMUST00000023154 Rhox8Q6VSS7 320 aa16.85■□□□□ 0.29
Cldn1-201ENSMUST00000023154 ScribQ80U72 1612 aa16.64■□□□□ 0.25
Cldn1-201ENSMUST00000023154 Rtl1Q7M732 1744 aa16.39■□□□□ 0.21
Cldn1-201ENSMUST00000023154 Dcaf1Q80TR8 1506 aa16.36■□□□□ 0.21
Cldn1-201ENSMUST00000023154 Kdm5dQ62240 1548 aa16.25■□□□□ 0.19
Cldn1-201ENSMUST00000023154 Rb1cc1Q9ESK9 1588 aa16.22■□□□□ 0.19
Cldn1-201ENSMUST00000023154 NacadQ5SWP3 1504 aa16.09■□□□□ 0.17
Cldn1-201ENSMUST00000023154 Ccdc180J3QNE4 1664 aa16.04■□□□□ 0.16
Cldn1-201ENSMUST00000023154 Baz1aO88379 1555 aa16■□□□□ 0.15
Cldn1-201ENSMUST00000023154 Zcchc6Q5BLK4 1491 aaKnown RBP15.99■□□□□ 0.15
Cldn1-201ENSMUST00000023154 Sycp2Q9CUU3 1500 aa15.77■□□□□ 0.12
Cldn1-201ENSMUST00000023154 Ccdc136Q3TVA9 1136 aa15.7■□□□□ 0.1
Cldn1-201ENSMUST00000023154 Crybg2B7ZCC2 1516 aa15.69■□□□□ 0.1
Cldn1-201ENSMUST00000023154 Smarca2Q6DIC0 1577 aa15.64■□□□□ 0.09
Cldn1-201ENSMUST00000023154 BicraF8VPZ9 1578 aa15.51■□□□□ 0.07
Cldn1-201ENSMUST00000023154 Cecr2E9Q2Z1 1453 aa15.36■□□□□ 0.05
Cldn1-201ENSMUST00000023154 Trim41Q5NCC3 630 aa15.3■□□□□ 0.04
Cldn1-201ENSMUST00000023154 HrcG5E8J6 738 aa15.28■□□□□ 0.04
Cldn1-201ENSMUST00000023154 Synj1Q8CHC4 1574 aa15.18■□□□□ 0.02
Cldn1-201ENSMUST00000023154 Brd4Q9ESU6 1400 aaKnown RBP15.18■□□□□ 0.02
Cldn1-201ENSMUST00000023154 CftrP26361 1476 aa15.06■□□□□ 0
Cldn1-201ENSMUST00000023154 Smarca4Q3TKT4 1613 aaKnown RBP15.04■□□□□ -0
Cldn1-201ENSMUST00000023154 Cngb1E1AZ71 1325 aa15.02□□□□□ -0.01
Cldn1-201ENSMUST00000023154 Cttnbp2B9EJA2 1648 aa15□□□□□ -0.01
Cldn1-201ENSMUST00000023154 Golga3P55937 1487 aa14.98□□□□□ -0.01
Cldn1-201ENSMUST00000023154 Cep164Q5DU05 1446 aa14.97□□□□□ -0.01
Cldn1-201ENSMUST00000023154 Rsf1E9PWW9 1441 aaKnown RBP14.95□□□□□ -0.02
Cldn1-201ENSMUST00000023154 Chic1Q8CBW7 227 aa14.93□□□□□ -0.02
Cldn1-201ENSMUST00000023154 Ccdc88bQ4QRL3 1481 aa14.91□□□□□ -0.02
Cldn1-201ENSMUST00000023154 Top2bQ64511 1612 aa14.89□□□□□ -0.03
Cldn1-201ENSMUST00000023154 Esf1Q3V1V3 845 aaKnown RBP14.88□□□□□ -0.03
Cldn1-201ENSMUST00000023154 Iqgap2Q3UQ44 1575 aa14.88□□□□□ -0.03
Cldn1-201ENSMUST00000023154 Ehmt2Q9Z148 1263 aaKnown RBP14.83□□□□□ -0.03
Cldn1-201ENSMUST00000023154 Atad2bE9Q166 1460 aaKnown RBP14.8□□□□□ -0.04
Cldn1-201ENSMUST00000023154 Cc2d2aQ8CFW7 1633 aa14.8□□□□□ -0.04
Cldn1-201ENSMUST00000023154 Pds5bQ4VA53 1446 aaKnown RBP14.75□□□□□ -0.05
Cldn1-201ENSMUST00000023154 Gab3Q8BSM5 595 aa14.73□□□□□ -0.05
Cldn1-201ENSMUST00000023154 Frmpd1A2AKB4 1549 aa14.62□□□□□ -0.07
Cldn1-201ENSMUST00000023154 Fmn1Q05860 1466 aa14.62□□□□□ -0.07
Cldn1-201ENSMUST00000023154 Wdr62Q3U3T8 1523 aa14.61□□□□□ -0.07
Cldn1-201ENSMUST00000023154 Acin1Q9JIX8 1338 aaKnown RBP14.56□□□□□ -0.08
Cldn1-201ENSMUST00000023154 Top2aQ01320 1528 aaKnown RBP14.55□□□□□ -0.08
Cldn1-201ENSMUST00000023154 Rpgrip1Q9EPQ2 1331 aa14.55□□□□□ -0.08
Cldn1-201ENSMUST00000023154 Unc13aQ4KUS2 1712 aa14.52□□□□□ -0.08
Cldn1-201ENSMUST00000023154 TnnQ80Z71 1560 aa14.5□□□□□ -0.09
Cldn1-201ENSMUST00000023154 Ercc6F8VPZ5 1481 aa14.49□□□□□ -0.09
Cldn1-201ENSMUST00000023154 Rapgef2Q8CHG7 1496 aa14.45□□□□□ -0.1
Cldn1-201ENSMUST00000023154 Thoc2B1AZI6 1594 aaKnown RBP14.41□□□□□ -0.1
Cldn1-201ENSMUST00000023154 Lamc3Q9R0B6 1581 aa14.41□□□□□ -0.1
Cldn1-201ENSMUST00000023154 Kif15Q6P9L6 1387 aa14.35□□□□□ -0.11
Cldn1-201ENSMUST00000023154 Cep162Q6ZQ06 1403 aa14.33□□□□□ -0.12
Cldn1-201ENSMUST00000023154 Eif4g1Q6NZJ6 1600 aaKnown RBP14.29□□□□□ -0.12
Cldn1-201ENSMUST00000023154 Camsap1A2AHC3 1581 aa14.28□□□□□ -0.12
Cldn1-201ENSMUST00000023154 PtprkP35822 1457 aa14.27□□□□□ -0.12
Cldn1-201ENSMUST00000023154 Il27Q8K3I6 234 aa14.27□□□□□ -0.13
Cldn1-201ENSMUST00000023154 Phldb1Q6PDH0 1371 aaKnown RBP14.26□□□□□ -0.13
Cldn1-201ENSMUST00000023154 Npm2Q80W85 207 aa14.25□□□□□ -0.13
Cldn1-201ENSMUST00000023154 Myt1lP97500 1187 aa14.24□□□□□ -0.13
Cldn1-201ENSMUST00000023154 Fam135aQ6NS59 1506 aa14.21□□□□□ -0.13
Cldn1-201ENSMUST00000023154 Arhgap35Q91YM2 1499 aa14.18□□□□□ -0.14
Cldn1-201ENSMUST00000023154 NrkQ9R0G8 1455 aa14.18□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Ubl4bQ9CQ84 188 aa14.17□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Cux2P70298 1426 aa14.16□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Shroom4Q1W617 1475 aa14.16□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Ccdc18Q640L5 1455 aa14.16□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Grin2bQ01097 1482 aa14.15□□□□□ -0.14
Cldn1-201ENSMUST00000023154 Mier1Q5UAK0 511 aa14.08□□□□□ -0.16
Cldn1-201ENSMUST00000023154 Dnajc5bQ9CQ94 199 aa14.05□□□□□ -0.16
Cldn1-201ENSMUST00000023154 Clip1Q922J3 1391 aa14.04□□□□□ -0.16
Cldn1-201ENSMUST00000023154 UbtfP25976 765 aaKnown RBP14.03□□□□□ -0.16
Cldn1-201ENSMUST00000023154 Npm1Q61937 292 aaKnown RBP14.03□□□□□ -0.16
Cldn1-201ENSMUST00000023154 Map3k1P53349 1493 aa14.02□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Mroh2bQ7M6Y6 1581 aa14.01□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Baz1bQ9Z277 1479 aa14.01□□□□□ -0.17
Cldn1-201ENSMUST00000023154 LrpprcQ6PB66 1392 aaKnown RBP14□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Arap1Q4LDD4 1452 aa13.98□□□□□ -0.17
Cldn1-201ENSMUST00000023154 PogzQ8BZH4 1409 aaKnown RBP13.98□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Plekhg3Q4VAC9 1341 aa13.98□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Duox2A2AQ99 1517 aa13.97□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Zeb1Q64318 1117 aa13.97□□□□□ -0.17
Cldn1-201ENSMUST00000023154 Efcab5A0JP43 1406 aa13.94□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Pcgf6Q99NA9 353 aa13.94□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Eea1Q8BL66 1411 aa13.94□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Samd9lQ69Z37 1561 aa13.93□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Kif21aQ9QXL2 1672 aa13.93□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Ap3b1Q9Z1T1 1105 aa13.92□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Ankrd26Q811D2 1581 aa13.92□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Dhx29Q6PGC1 1365 aaKnown RBP13.91□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Setd5Q5XJV7 1441 aa13.91□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Arhgef5E9Q7D5 1581 aa13.91□□□□□ -0.18
Cldn1-201ENSMUST00000023154 AqrQ8CFQ3 1481 aaKnown RBP13.91□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Mrc2Q64449 1479 aa13.9□□□□□ -0.18
Cldn1-201ENSMUST00000023154 Erich3F6QRE9 1637 aa13.89□□□□□ -0.19
Cldn1-201ENSMUST00000023154 Cux1P53564 1515 aa13.86□□□□□ -0.19
Cldn1-201ENSMUST00000023154 Crocc2F6XLV1 1638 aa13.86□□□□□ -0.19
Cldn1-201ENSMUST00000023154 SynmQ70IV5 1561 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms