Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm25239-201ENSMUST00000174915 86 ntBASIC51.85■■■■■ 5.89
Col15a1O35206 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC48.1■■■■■ 5.29
Col15a1O35206 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC47.29■■■■■ 5.16
Col15a1O35206 Gm24109-201ENSMUST00000175489 103 ntBASIC45.15■■■■■ 4.82
Col15a1O35206 Gm15042-201ENSMUST00000120212 883 ntBASIC44.98■■■■■ 4.79
Col15a1O35206 Gm15045-201ENSMUST00000117359 883 ntBASIC44.05■■■■■ 4.64
Col15a1O35206 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC43.8■■■■■ 4.6
Col15a1O35206 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC43.68■■■■■ 4.58
Col15a1O35206 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC43.42■■■■■ 4.54
Col15a1O35206 Gm23366-201ENSMUST00000175022 89 ntBASIC43.19■■■■■ 4.5
Col15a1O35206 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Col15a1O35206 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
Col15a1O35206 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.39■■■■■ 4.38
Col15a1O35206 AC153911.1-202ENSMUST00000218534 1034 ntBASIC42.14■■■■■ 4.34
Col15a1O35206 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42.05■■■■■ 4.32
Col15a1O35206 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC41.83■■■■■ 4.29
Col15a1O35206 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.64■■■■■ 4.26
Col15a1O35206 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.6■■■■■ 4.25
Col15a1O35206 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC41.59■■■■■ 4.25
Col15a1O35206 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.59■■■■■ 4.25
Col15a1O35206 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
Col15a1O35206 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.19■■■■■ 4.18
Col15a1O35206 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Col15a1O35206 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
Col15a1O35206 Gm25238-201ENSMUST00000174914 89 ntBASIC41.08■■■■■ 4.17
Col15a1O35206 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.01■■■■■ 4.16
Col15a1O35206 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
Col15a1O35206 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Col15a1O35206 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.94■■■■■ 4.14
Col15a1O35206 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Col15a1O35206 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.59■■■■■ 4.09
Col15a1O35206 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.53■■■■■ 4.08
Col15a1O35206 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.3■■■■■ 4.04
Col15a1O35206 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC40.17■■■■■ 4.02
Col15a1O35206 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Col15a1O35206 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Col15a1O35206 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.86■■■■□ 3.97
Col15a1O35206 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC39.79■■■■□ 3.96
Col15a1O35206 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC39.77■■■■□ 3.96
Col15a1O35206 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Col15a1O35206 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
Col15a1O35206 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39.66■■■■□ 3.94
Col15a1O35206 Gm27325-201ENSMUST00000175467 74 ntBASIC39.42■■■■□ 3.9
Col15a1O35206 Psd-208ENSMUST00000224556 2034 ntBASIC39.36■■■■□ 3.89
Col15a1O35206 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.36■■■■□ 3.89
Col15a1O35206 Gm25262-201ENSMUST00000174934 133 ntBASIC39.34■■■■□ 3.89
Col15a1O35206 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39.3■■■■□ 3.88
Col15a1O35206 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Col15a1O35206 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Col15a1O35206 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
Col15a1O35206 Rab21-202ENSMUST00000218831 843 ntBASIC38.84■■■■□ 3.81
Col15a1O35206 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.8■■■■□ 3.8
Col15a1O35206 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.75■■■■□ 3.79
Col15a1O35206 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.73■■■■□ 3.79
Col15a1O35206 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Col15a1O35206 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.64■■■■□ 3.78
Col15a1O35206 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC38.61■■■■□ 3.77
Col15a1O35206 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.58■■■■□ 3.77
Col15a1O35206 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Col15a1O35206 Gm26115-201ENSMUST00000175605 87 ntBASIC38.48■■■■□ 3.75
Col15a1O35206 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC38.47■■■■□ 3.75
Col15a1O35206 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38.47■■■■□ 3.75
Col15a1O35206 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Col15a1O35206 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.44■■■■□ 3.74
Col15a1O35206 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Col15a1O35206 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Col15a1O35206 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38.34■■■■□ 3.73
Col15a1O35206 Gm8109-201ENSMUST00000194076 746 ntBASIC38.3■■■■□ 3.72
Col15a1O35206 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
Col15a1O35206 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Col15a1O35206 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Col15a1O35206 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.19■■■■□ 3.7
Col15a1O35206 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.15■■■■□ 3.7
Col15a1O35206 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.13■■■■□ 3.69
Col15a1O35206 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Col15a1O35206 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.03■■■■□ 3.68
Col15a1O35206 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Col15a1O35206 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Col15a1O35206 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.97■■■■□ 3.67
Col15a1O35206 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC37.91■■■■□ 3.66
Col15a1O35206 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Col15a1O35206 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
Col15a1O35206 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.8■■■■□ 3.64
Col15a1O35206 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC37.72■■■■□ 3.63
Col15a1O35206 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.72■■■■□ 3.63
Col15a1O35206 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Col15a1O35206 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.71■■■■□ 3.63
Col15a1O35206 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Col15a1O35206 Gm17082-201ENSMUST00000166043 1091 ntBASIC37.57■■■■□ 3.61
Col15a1O35206 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Col15a1O35206 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37.48■■■■□ 3.59
Col15a1O35206 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Col15a1O35206 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC37.46■■■■□ 3.59
Col15a1O35206 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37.42■■■■□ 3.58
Col15a1O35206 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.4■■■■□ 3.58
Col15a1O35206 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Col15a1O35206 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Col15a1O35206 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Col15a1O35206 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.29■■■■□ 3.56
Col15a1O35206 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms