Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm25239-201ENSMUST00000174915 86 ntBASIC51,85■■■■■ 5,89
Col15a1O35206 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC48,1■■■■■ 5,29
Col15a1O35206 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC47,29■■■■■ 5,16
Col15a1O35206 Gm24109-201ENSMUST00000175489 103 ntBASIC45,15■■■■■ 4,82
Col15a1O35206 Gm15042-201ENSMUST00000120212 883 ntBASIC44,98■■■■■ 4,79
Col15a1O35206 Gm15045-201ENSMUST00000117359 883 ntBASIC44,05■■■■■ 4,64
Col15a1O35206 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC43,8■■■■■ 4,6
Col15a1O35206 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC43,68■■■■■ 4,58
Col15a1O35206 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC43,42■■■■■ 4,54
Col15a1O35206 Gm23366-201ENSMUST00000175022 89 ntBASIC43,19■■■■■ 4,5
Col15a1O35206 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43,12■■■■■ 4,49
Col15a1O35206 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42,96■■■■■ 4,47
Col15a1O35206 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42,39■■■■■ 4,38
Col15a1O35206 AC153911.1-202ENSMUST00000218534 1034 ntBASIC42,14■■■■■ 4,34
Col15a1O35206 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42,05■■■■■ 4,32
Col15a1O35206 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC41,83■■■■■ 4,29
Col15a1O35206 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41,64■■■■■ 4,26
Col15a1O35206 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41,6■■■■■ 4,25
Col15a1O35206 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC41,59■■■■■ 4,25
Col15a1O35206 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41,59■■■■■ 4,25
Col15a1O35206 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC41,23■■■■■ 4,19
Col15a1O35206 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41,19■■■■■ 4,18
Col15a1O35206 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41,17■■■■■ 4,18
Col15a1O35206 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41,09■■■■■ 4,17
Col15a1O35206 Gm25238-201ENSMUST00000174914 89 ntBASIC41,08■■■■■ 4,17
Col15a1O35206 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41,01■■■■■ 4,16
Col15a1O35206 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC40,98■■■■■ 4,15
Col15a1O35206 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40,94■■■■■ 4,14
Col15a1O35206 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40,94■■■■■ 4,14
Col15a1O35206 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC40,68■■■■■ 4,1
Col15a1O35206 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40,59■■■■■ 4,09
Col15a1O35206 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40,53■■■■■ 4,08
Col15a1O35206 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40,3■■■■■ 4,04
Col15a1O35206 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC40,17■■■■■ 4,02
Col15a1O35206 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC40,04■■■■■ 4
Col15a1O35206 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39,91■■■■□ 3,98
Col15a1O35206 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39,86■■■■□ 3,97
Col15a1O35206 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC39,79■■■■□ 3,96
Col15a1O35206 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC39,77■■■■□ 3,96
Col15a1O35206 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC39,68■■■■□ 3,94
Col15a1O35206 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39,66■■■■□ 3,94
Col15a1O35206 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39,66■■■■□ 3,94
Col15a1O35206 Gm27325-201ENSMUST00000175467 74 ntBASIC39,42■■■■□ 3,9
Col15a1O35206 Psd-208ENSMUST00000224556 2034 ntBASIC39,36■■■■□ 3,89
Col15a1O35206 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39,36■■■■□ 3,89
Col15a1O35206 Gm25262-201ENSMUST00000174934 133 ntBASIC39,34■■■■□ 3,89
Col15a1O35206 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39,3■■■■□ 3,88
Col15a1O35206 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39,22■■■■□ 3,87
Col15a1O35206 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38,99■■■■□ 3,83
Col15a1O35206 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38,91■■■■□ 3,82
Col15a1O35206 Rab21-202ENSMUST00000218831 843 ntBASIC38,84■■■■□ 3,81
Col15a1O35206 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38,8■■■■□ 3,8
Col15a1O35206 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38,75■■■■□ 3,79
Col15a1O35206 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38,73■■■■□ 3,79
Col15a1O35206 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC38,72■■■■□ 3,79
Col15a1O35206 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38,64■■■■□ 3,78
Col15a1O35206 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC38,61■■■■□ 3,77
Col15a1O35206 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38,58■■■■□ 3,77
Col15a1O35206 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38,54■■■■□ 3,76
Col15a1O35206 Gm26115-201ENSMUST00000175605 87 ntBASIC38,48■■■■□ 3,75
Col15a1O35206 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC38,47■■■■□ 3,75
Col15a1O35206 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38,47■■■■□ 3,75
Col15a1O35206 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC38,44■■■■□ 3,74
Col15a1O35206 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38,44■■■■□ 3,74
Col15a1O35206 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38,44■■■■□ 3,74
Col15a1O35206 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38,38■■■■□ 3,73
Col15a1O35206 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38,34■■■■□ 3,73
Col15a1O35206 Gm8109-201ENSMUST00000194076 746 ntBASIC38,3■■■■□ 3,72
Col15a1O35206 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38,28■■■■□ 3,72
Col15a1O35206 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38,27■■■■□ 3,72
Col15a1O35206 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38,25■■■■□ 3,71
Col15a1O35206 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38,19■■■■□ 3,7
Col15a1O35206 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38,15■■■■□ 3,7
Col15a1O35206 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38,13■■■■□ 3,69
Col15a1O35206 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38,11■■■■□ 3,69
Col15a1O35206 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38,03■■■■□ 3,68
Col15a1O35206 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3,67
Col15a1O35206 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37,98■■■■□ 3,67
Col15a1O35206 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37,97■■■■□ 3,67
Col15a1O35206 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC37,91■■■■□ 3,66
Col15a1O35206 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37,87■■■■□ 3,65
Col15a1O35206 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37,85■■■■□ 3,65
Col15a1O35206 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37,8■■■■□ 3,64
Col15a1O35206 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC37,72■■■■□ 3,63
Col15a1O35206 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37,72■■■■□ 3,63
Col15a1O35206 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37,71■■■■□ 3,63
Col15a1O35206 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37,71■■■■□ 3,63
Col15a1O35206 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37,61■■■■□ 3,61
Col15a1O35206 Gm17082-201ENSMUST00000166043 1091 ntBASIC37,57■■■■□ 3,61
Col15a1O35206 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37,49■■■■□ 3,59
Col15a1O35206 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37,48■■■■□ 3,59
Col15a1O35206 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC37,47■■■■□ 3,59
Col15a1O35206 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC37,46■■■■□ 3,59
Col15a1O35206 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37,42■■■■□ 3,58
Col15a1O35206 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37,4■■■■□ 3,58
Col15a1O35206 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC37,33■■■■□ 3,57
Col15a1O35206 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37,31■■■■□ 3,56
Col15a1O35206 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC37,3■■■■□ 3,56
Col15a1O35206 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37,29■■■■□ 3,56
Col15a1O35206 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC37,27■■■■□ 3,56
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms