RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W DUS4Q06063 367 aa12.14□□□□□ -0.47
MSF1YPR047W SAM2P19358 384 aaKnown RBP12.13□□□□□ -0.47
MSF1YPR047W OPI1P21957 404 aa12.13□□□□□ -0.47
MSF1YPR047W RGT1P32862 1170 aa12.13□□□□□ -0.47
MSF1YPR047W UIP5P36137 443 aa12.13□□□□□ -0.47
MSF1YPR047W ALD6P54115 500 aaKnown RBP12.13□□□□□ -0.47
MSF1YPR047W CDC19P00549 500 aaKnown RBP12.12□□□□□ -0.47
MSF1YPR047W CHO2P05374 869 aaKnown RBP12.12□□□□□ -0.47
MSF1YPR047W STM1P39015 273 aaKnown RBP12.12□□□□□ -0.47
MSF1YPR047W FIR1P40020 876 aa12.12□□□□□ -0.47
MSF1YPR047W YJR107WP47145 328 aa12.12□□□□□ -0.47
MSF1YPR047W RAD18P10862 487 aa12.11□□□□□ -0.47
MSF1YPR047W UTR4P32626 227 aa12.11□□□□□ -0.47
MSF1YPR047W MET1P36150 593 aa12.11□□□□□ -0.47
MSF1YPR047W AFG3P39925 761 aa12.11□□□□□ -0.47
MSF1YPR047W MDM20Q12387 796 aaKnown RBP12.11□□□□□ -0.47
MSF1YPR047W ACE2P21192 770 aa12.11□□□□□ -0.47
MSF1YPR047W UBP9P39967 754 aa12.11□□□□□ -0.47
MSF1YPR047W RPS15Q01855 142 aaKnown RBP12.11□□□□□ -0.47
MSF1YPR047W BUL2Q03758 920 aaKnown RBP12.11□□□□□ -0.47
MSF1YPR047W MAM3Q12296 706 aa12.11□□□□□ -0.47
MSF1YPR047W PRO3P32263 286 aaKnown RBP12.1□□□□□ -0.47
MSF1YPR047W SRP40P32583 406 aaPredicted RBP12.1□□□□□ -0.47
MSF1YPR047W TOM71P38825 639 aaKnown RBP12.1□□□□□ -0.47
MSF1YPR047W YGR125WP53273 1036 aa12.1□□□□□ -0.47
MSF1YPR047W UFD2P54860 961 aa12.1□□□□□ -0.47
MSF1YPR047W YPL034WQ03083 165 aa12.1□□□□□ -0.47
MSF1YPR047W WHI3P34761 661 aaKnown RBP12.09□□□□□ -0.47
MSF1YPR047W PES4P39684 611 aa12.09□□□□□ -0.47
MSF1YPR047W YFL040WP43562 540 aa12.09□□□□□ -0.47
MSF1YPR047W PTK2P47116 818 aaKnown RBP12.09□□□□□ -0.47
MSF1YPR047W YVH1Q02256 364 aaKnown RBP12.09□□□□□ -0.47
MSF1YPR047W PHO88P38264 188 aaPredicted RBP12.08□□□□□ -0.48
MSF1YPR047W ECM29P38737 1868 aa12.08□□□□□ -0.48
MSF1YPR047W SAM1P10659 382 aaKnown RBP12.07□□□□□ -0.48
MSF1YPR047W BCS1P32839 456 aa12.07□□□□□ -0.48
MSF1YPR047W KSP1P38691 1029 aaKnown RBP12.07□□□□□ -0.48
MSF1YPR047W FMP30Q02883 468 aa12.07□□□□□ -0.48
MSF1YPR047W EAR1Q03212 550 aa12.07□□□□□ -0.48
MSF1YPR047W NKP2Q06162 153 aa12.07□□□□□ -0.48
MSF1YPR047W RIT1P23796 513 aa12.06□□□□□ -0.48
MSF1YPR047W DBP1P24784 617 aaKnown RBP12.05□□□□□ -0.48
MSF1YPR047W TGL1P34163 548 aa12.05□□□□□ -0.48
MSF1YPR047W MYO3P36006 1272 aa12.05□□□□□ -0.48
MSF1YPR047W FOL1P53848 824 aa12.05□□□□□ -0.48
MSF1YPR047W VPS30Q02948 557 aa12.05□□□□□ -0.48
MSF1YPR047W CSC1Q06538 782 aa12.05□□□□□ -0.48
MSF1YPR047W SSF2Q12153 453 aaPredicted RBP12.05□□□□□ -0.48
MSF1YPR047W TMA64Q04600 565 aaKnown RBP12.04□□□□□ -0.48
MSF1YPR047W ANP1P32629 500 aa12.03□□□□□ -0.48
MSF1YPR047W VPS29P38759 282 aa12.03□□□□□ -0.48
MSF1YPR047W VPS45P38932 577 aa12.03□□□□□ -0.48
MSF1YPR047W SLD5Q03406 294 aa12.03□□□□□ -0.48
MSF1YPR047W MSC6Q08818 692 aaKnown RBP12.03□□□□□ -0.48
MSF1YPR047W RIM20Q12033 661 aa12.03□□□□□ -0.48
MSF1YPR047W DLD1P32891 587 aa12.03□□□□□ -0.48
MSF1YPR047W SHP1P34223 423 aa12.03□□□□□ -0.48
MSF1YPR047W ECM16Q04217 1267 aaKnown RBP12.03□□□□□ -0.48
MSF1YPR047W SPH1Q06160 661 aa12.03□□□□□ -0.48
MSF1YPR047W KTR2P33550 425 aa12.02□□□□□ -0.49
MSF1YPR047W SKI2P35207 1287 aaKnown RBP RIP-Chip data12.02□□□□□ -0.49not detected
MSF1YPR047W NUC1P08466 329 aa12.01□□□□□ -0.49
MSF1YPR047W RPL8BP29453 256 aaKnown RBP12.01□□□□□ -0.49
MSF1YPR047W NOC2P39744 710 aaKnown RBP12.01□□□□□ -0.49
MSF1YPR047W VPS53P47061 822 aa12.01□□□□□ -0.49
MSF1YPR047W DUS3Q06053 668 aaKnown RBP12.01□□□□□ -0.49
MSF1YPR047W UTP4Q06679 776 aaKnown RBP12.01□□□□□ -0.49
MSF1YPR047W YPR117WQ06116 2489 aa12.01□□□□□ -0.49
MSF1YPR047W YUR1P26725 428 aa12□□□□□ -0.49
MSF1YPR047W SKP2P42843 763 aa12□□□□□ -0.49
MSF1YPR047W RPT6Q01939 405 aaKnown RBP12□□□□□ -0.49
MSF1YPR047W SPN1Q06505 410 aaPredicted RBP12□□□□□ -0.49
MSF1YPR047W ISW2Q08773 1120 aa12□□□□□ -0.49
MSF1YPR047W ERP3Q12403 225 aa12□□□□□ -0.49
MSF1YPR047W PDC1P06169 563 aaKnown RBP11.99□□□□□ -0.49
MSF1YPR047W MCR1P36060 302 aaKnown RBP11.99□□□□□ -0.49
MSF1YPR047W CRG1P38892 291 aaRIP-Chip data11.99□□□□□ -0.49not detected
MSF1YPR047W HDA1P53973 706 aa11.99□□□□□ -0.49
MSF1YPR047W CLF1Q12309 687 aaPredicted RBP11.99□□□□□ -0.49
MSF1YPR047W VAS1P07806 1104 aaKnown RBP11.98□□□□□ -0.49
MSF1YPR047W MCM4P30665 933 aaKnown RBP11.98□□□□□ -0.49
MSF1YPR047W YGL039WP53183 348 aaKnown RBP11.98□□□□□ -0.49
MSF1YPR047W SUE1Q06524 206 aa11.98□□□□□ -0.49
MSF1YPR047W POX1P13711 748 aa11.97□□□□□ -0.49
MSF1YPR047W RER2P35196 286 aa11.97□□□□□ -0.49
MSF1YPR047W AAP1P37898 856 aaKnown RBP11.97□□□□□ -0.49
MSF1YPR047W YDR461C-AQ2V2P7 80 aa11.97□□□□□ -0.49
MSF1YPR047W RAD50P12753 1312 aa11.97□□□□□ -0.49
MSF1YPR047W MIP1P15801 1254 aa11.96□□□□□ -0.49
MSF1YPR047W TKL1P23254 680 aaKnown RBP11.96□□□□□ -0.49
MSF1YPR047W TFC4P33339 1025 aa11.96□□□□□ -0.49
MSF1YPR047W AVT3P36062 692 aa11.96□□□□□ -0.49
MSF1YPR047W SCS3P53012 380 aa11.96□□□□□ -0.49
MSF1YPR047W LSB1P53281 241 aa11.96□□□□□ -0.49
MSF1YPR047W MYO5Q04439 1219 aaKnown RBP11.96□□□□□ -0.49
MSF1YPR047W FPR4Q06205 392 aaPredicted RBP11.96□□□□□ -0.49
MSF1YPR047W GUD1Q07729 489 aa11.96□□□□□ -0.49
MSF1YPR047W MAK31P23059 88 aa11.95□□□□□ -0.5
MSF1YPR047W SEC8P32855 1065 aa11.95□□□□□ -0.5
MSF1YPR047W TIM23P32897 222 aa11.95□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms