RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	MON1	P53129	644 aa		4.36	□□□□□ -1.71
YPR039W	YPR039W	RCM1	P53972	490 aa		4.36	□□□□□ -1.71
YPR039W	YPR039W	RPS4A	P0CX35	261 aa	Known RBP	4.35	□□□□□ -1.71
YPR039W	YPR039W	RPS4B	P0CX36	261 aa	Known RBP	4.35	□□□□□ -1.71
YPR039W	YPR039W	POL12	P38121	705 aa	Predicted RBP	4.35	□□□□□ -1.71
YPR039W	YPR039W	REI1	P38344	393 aa	Predicted RBP	4.35	□□□□□ -1.71
YPR039W	YPR039W	CIT3	P43635	486 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	NUT1	P53114	1132 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	UTP22	P53254	1237 aa	Predicted RBP	4.35	□□□□□ -1.71
YPR039W	YPR039W	CDC55	Q00362	526 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	MEC3	Q02574	474 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	HAT1	Q12341	374 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	YBL113C	Q7M4S9	792 aa		4.35	□□□□□ -1.71
YPR039W	YPR039W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-DR6	P0CX70	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-ER1	P0CX71	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-LR2	P0CX72	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-PL	P0CX73	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-JR1	P0CX74	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-LR3	P0CX75	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-ML2	P0CX76	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	MCM5	P29496	775 aa	Known RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	CDC3	P32457	520 aa	Known RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	MSH4	P40965	878 aa	Predicted RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	ELA1	P53861	379 aa	Predicted RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	MSH6	Q03834	1242 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-GR1	Q12085	440 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	YLL054C	Q12244	843 aa		4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	TY1A-OL	Q92392	440 aa	Known RBP	4.34	□□□□□ -1.71
YPR039W	YPR039W	SAP155	P43612	1002 aa		4.33	□□□□□ -1.72
YPR039W	YPR039W	YAF9	P53930	226 aa		4.33	□□□□□ -1.72
YPR039W	YPR039W	NUT2	Q06213	157 aa		4.33	□□□□□ -1.72
YPR039W	YPR039W	AOS1	Q06624	347 aa		4.33	□□□□□ -1.72
YPR039W	YPR039W	ELM1	P32801	640 aa		4.32	□□□□□ -1.72
YPR039W	YPR039W	GEF1	P37020	779 aa		4.32	□□□□□ -1.72
YPR039W	YPR039W	OYE3	P41816	400 aa	Predicted RBP	4.32	□□□□□ -1.72
YPR039W	YPR039W	YGR045C	P53229	120 aa		4.32	□□□□□ -1.72
YPR039W	YPR039W	DFG16	Q99234	619 aa		4.32	□□□□□ -1.72
YPR039W	YPR039W	HSP78	P33416	811 aa		4.31	□□□□□ -1.72
YPR039W	YPR039W	SLS1	P42900	643 aa		4.31	□□□□□ -1.72
YPR039W	YPR039W	PMT7	Q06644	662 aa		4.31	□□□□□ -1.72
YPR039W	YPR039W	NFS1	P25374	497 aa		4.3	□□□□□ -1.72
YPR039W	YPR039W	NMD3	P38861	518 aa	Known RBP	4.3	□□□□□ -1.72
YPR039W	YPR039W	RVS167	P39743	482 aa	Known RBP	4.3	□□□□□ -1.72
YPR039W	YPR039W	SSY1	Q03770	852 aa		4.3	□□□□□ -1.72
YPR039W	YPR039W	NOC3	Q07896	663 aa	Predicted RBP	4.3	□□□□□ -1.72
YPR039W	YPR039W	NSI1	Q12457	570 aa		4.3	□□□□□ -1.72
YPR039W	YPR039W	UBP5	P39944	805 aa		4.29	□□□□□ -1.72
YPR039W	YPR039W	ALT1	P52893	592 aa		4.29	□□□□□ -1.72
YPR039W	YPR039W	AVO1	Q08236	1176 aa		4.29	□□□□□ -1.72
YPR039W	YPR039W	YVC1	Q12324	675 aa		4.29	□□□□□ -1.72
YPR039W	YPR039W	GAS1	P22146	559 aa	Known RBP	4.28	□□□□□ -1.72
YPR039W	YPR039W	UGA4	P32837	571 aa		4.28	□□□□□ -1.72
YPR039W	YPR039W	EXO5	P38289	585 aa		4.28	□□□□□ -1.72
YPR039W	YPR039W	YOR059C	Q08448	450 aa	Known RBP	4.28	□□□□□ -1.72
YPR039W	YPR039W	TRE1	Q08919	783 aa		4.28	□□□□□ -1.72
YPR039W	YPR039W	ADP1	P25371	1049 aa		4.27	□□□□□ -1.73
YPR039W	YPR039W	YKL077W	P36081	392 aa		4.27	□□□□□ -1.73
YPR039W	YPR039W	NEM1	P38757	446 aa		4.27	□□□□□ -1.73
YPR039W	YPR039W	PEX7	P39108	375 aa		4.27	□□□□□ -1.73
YPR039W	YPR039W	PRO1	P32264	428 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	SMY2	P32909	740 aa	Known RBP	4.26	□□□□□ -1.73
YPR039W	YPR039W	YHL050C	P38721	697 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	YHR219W	P38900	624 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	ECL1	P48235	211 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	SAM37	P50110	327 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	YCS4	Q06156	1176 aa		4.26	□□□□□ -1.73
YPR039W	YPR039W	PTC7	P38797	343 aa		4.25	□□□□□ -1.73
YPR039W	YPR039W	GTS1	P40956	396 aa		4.25	□□□□□ -1.73
YPR039W	YPR039W	PEX13	P80667	386 aa		4.25	□□□□□ -1.73
YPR039W	YPR039W	TOS4	Q06266	489 aa		4.25	□□□□□ -1.73
YPR039W	YPR039W	NNK1	P36003	928 aa		4.24	□□□□□ -1.73
YPR039W	YPR039W	YNR063W	P53749	607 aa		4.24	□□□□□ -1.73
YPR039W	YPR039W	TPP1	Q03796	238 aa		4.24	□□□□□ -1.73
YPR039W	YPR039W	PUS7	Q08647	676 aa	Known RBP	4.24	□□□□□ -1.73
YPR039W	YPR039W	LPX1	Q12405	387 aa	Known RBP	4.24	□□□□□ -1.73
YPR039W	YPR039W	MSH3	P25336	1018 aa		4.23	□□□□□ -1.73
YPR039W	YPR039W	TSA1	P34760	196 aa	Known RBP	4.23	□□□□□ -1.73
YPR039W	YPR039W	UTP5	Q04177	643 aa	Known RBP	4.23	□□□□□ -1.73
YPR039W	YPR039W	CDA2	Q06703	312 aa		4.23	□□□□□ -1.73
YPR039W	YPR039W	RET1	P22276	1149 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	PRP40	P33203	583 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	ARL1	P38116	183 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	CIC1	P38779	376 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	YAR028W	P39548	234 aa		4.22	□□□□□ -1.73
YPR039W	YPR039W	NIT1	P40447	199 aa		4.22	□□□□□ -1.73
YPR039W	YPR039W	PRP43	P53131	767 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	NOG1	Q02892	647 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	DAL4	Q04895	635 aa		4.22	□□□□□ -1.73
YPR039W	YPR039W	YLR257W	Q06146	321 aa	Known RBP	4.22	□□□□□ -1.73
YPR039W	YPR039W	PHO4	P07270	312 aa	Known RBP	4.21	□□□□□ -1.74
YPR039W	YPR039W	MET4	P32389	672 aa		4.21	□□□□□ -1.74
YPR039W	YPR039W	SHU2	P38957	223 aa		4.21	□□□□□ -1.74
YPR039W	YPR039W	XKS1	P42826	600 aa		4.21	□□□□□ -1.74
YPR039W	YPR039W	ULP1	Q02724	621 aa		4.21	□□□□□ -1.74
YPR039W	YPR039W	DAK2	P43550	591 aa		4.2	□□□□□ -1.74
YPR039W	YPR039W	TAF1	P46677	1066 aa		4.2	□□□□□ -1.74
YPR039W	YPR039W	MTR4	P47047	1073 aa	Known RBP	4.2	□□□□□ -1.74
YPR039W	YPR039W	RSM26	P47141	266 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 74.3 ms