RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C SLD5Q03406 294 aa10.47□□□□□ -0.73
PUP1YOR157C RPP0P05317 312 aaKnown RBP10.46□□□□□ -0.73
PUP1YOR157C SAM1P10659 382 aaKnown RBP10.46□□□□□ -0.73
PUP1YOR157C YKR018CP36114 725 aa10.46□□□□□ -0.73
PUP1YOR157C YPL260WQ08977 551 aa10.46□□□□□ -0.73
PUP1YOR157C NUM1Q00402 2748 aa10.45□□□□□ -0.74
PUP1YOR157C RPS19AP07280 144 aaKnown RBP10.45□□□□□ -0.74
PUP1YOR157C RPS19BP07281 144 aaPredicted RBP10.45□□□□□ -0.74
PUP1YOR157C RAD18P10862 487 aa10.45□□□□□ -0.74
PUP1YOR157C POT1P27796 417 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
PUP1YOR157C VID30P53076 958 aa10.45□□□□□ -0.74
PUP1YOR157C YNL115CP53925 644 aa10.45□□□□□ -0.74
PUP1YOR157C POX1P13711 748 aa10.44□□□□□ -0.74
PUP1YOR157C SHP1P34223 423 aa10.44□□□□□ -0.74
PUP1YOR157C VPS72Q03388 795 aa10.44□□□□□ -0.74
PUP1YOR157C RTP1Q12751 981 aa10.44□□□□□ -0.74
PUP1YOR157C SAM2P19358 384 aaKnown RBP10.43□□□□□ -0.74
PUP1YOR157C SUI2P20459 304 aaKnown RBP10.43□□□□□ -0.74
PUP1YOR157C VPS29P38759 282 aa10.43□□□□□ -0.74
PUP1YOR157C SSF1P38789 453 aaPredicted RBP10.43□□□□□ -0.74
PUP1YOR157C PTK2P47116 818 aaKnown RBP10.43□□□□□ -0.74
PUP1YOR157C SKG3Q06315 1026 aa10.43□□□□□ -0.74
PUP1YOR157C CHS3P29465 1165 aa10.42□□□□□ -0.74
PUP1YOR157C SOL4P53315 255 aa10.42□□□□□ -0.74
PUP1YOR157C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
PUP1YOR157C HAA1Q12753 694 aaKnown RBP10.42□□□□□ -0.74
PUP1YOR157C VPS53P47061 822 aa10.41□□□□□ -0.74
PUP1YOR157C POL32P47110 350 aa10.41□□□□□ -0.74
PUP1YOR157C RDH54P38086 958 aa10.4□□□□□ -0.74
PUP1YOR157C SGM1P47166 707 aa10.4□□□□□ -0.74
PUP1YOR157C ERP3Q12403 225 aa10.4□□□□□ -0.74
PUP1YOR157C GPT2P36148 743 aa10.39□□□□□ -0.75
PUP1YOR157C KTR3P38130 404 aaPredicted RBP10.39□□□□□ -0.75
PUP1YOR157C DSF2P38213 736 aa10.39□□□□□ -0.75
PUP1YOR157C PHO88P38264 188 aaPredicted RBP10.39□□□□□ -0.75
PUP1YOR157C YCK3P39962 524 aa10.39□□□□□ -0.75
PUP1YOR157C TMA64Q04600 565 aaKnown RBP10.39□□□□□ -0.75
PUP1YOR157C YMR321CQ04898 105 aa10.38□□□□□ -0.75
PUP1YOR157C DUS3Q06053 668 aaKnown RBP10.38□□□□□ -0.75
PUP1YOR157C CSC1Q06538 782 aa10.38□□□□□ -0.75
PUP1YOR157C TRM11Q12463 433 aa10.38□□□□□ -0.75
PUP1YOR157C MYO1P08964 1928 aa10.38□□□□□ -0.75
PUP1YOR157C MOT1P32333 1867 aa10.38□□□□□ -0.75
PUP1YOR157C PHR1P05066 565 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
PUP1YOR157C MCM4P30665 933 aaKnown RBP10.37□□□□□ -0.75
PUP1YOR157C TGL1P34163 548 aa10.37□□□□□ -0.75
PUP1YOR157C DBP7P36120 742 aaKnown RBP10.37□□□□□ -0.75
PUP1YOR157C YMR147WP40218 223 aaKnown RBP10.37□□□□□ -0.75
PUP1YOR157C ACE2P21192 770 aa10.36□□□□□ -0.75
PUP1YOR157C YHL050CP38721 697 aa10.36□□□□□ -0.75
PUP1YOR157C VID27P40157 782 aa10.36□□□□□ -0.75
PUP1YOR157C MAK21Q12176 1025 aaKnown RBP10.36□□□□□ -0.75
PUP1YOR157C LAM4P38800 1345 aa10.35□□□□□ -0.75
PUP1YOR157C TFC4P33339 1025 aa10.35□□□□□ -0.75
PUP1YOR157C GEF1P37020 779 aa10.35□□□□□ -0.75
PUP1YOR157C FLR1P38124 548 aa10.35□□□□□ -0.75
PUP1YOR157C BRL1P38770 471 aa10.35□□□□□ -0.75
PUP1YOR157C IRC8P47046 822 aa10.35□□□□□ -0.75
PUP1YOR157C EMI2Q04409 500 aaKnown RBP10.35□□□□□ -0.75
PUP1YOR157C UBP9P39967 754 aa10.34□□□□□ -0.75
PUP1YOR157C FMP10P40098 244 aa10.34□□□□□ -0.75
PUP1YOR157C INP51P40559 946 aaKnown RBP10.34□□□□□ -0.75
PUP1YOR157C AZR1P50080 613 aa10.34□□□□□ -0.75
PUP1YOR157C SPH1Q06160 661 aa10.34□□□□□ -0.75
PUP1YOR157C ISA1Q07821 250 aaPredicted RBP10.34□□□□□ -0.75
PUP1YOR157C DUR3P33413 735 aa10.33□□□□□ -0.76
PUP1YOR157C IOC3P43596 787 aa10.33□□□□□ -0.76
PUP1YOR157C MAS2P11914 482 aa10.32□□□□□ -0.76
PUP1YOR157C TKL1P23254 680 aaKnown RBP10.32□□□□□ -0.76
PUP1YOR157C MCR1P36060 302 aaKnown RBP10.32□□□□□ -0.76
PUP1YOR157C POA1P38218 177 aa10.32□□□□□ -0.76
PUP1YOR157C REG2P38232 338 aa10.32□□□□□ -0.76
PUP1YOR157C OYE3P41816 400 aaPredicted RBP10.32□□□□□ -0.76
PUP1YOR157C INP52P50942 1183 aa10.32□□□□□ -0.76
PUP1YOR157C URK1P27515 501 aa10.31□□□□□ -0.76
PUP1YOR157C GCD7P32502 381 aaPredicted RBP10.31□□□□□ -0.76
PUP1YOR157C TIM23P32897 222 aa10.31□□□□□ -0.76
PUP1YOR157C YNG2P38806 282 aaKnown RBP10.31□□□□□ -0.76
PUP1YOR157C FPR3P38911 411 aaKnown RBP10.31□□□□□ -0.76
PUP1YOR157C TVP23P38962 199 aa10.31□□□□□ -0.76
PUP1YOR157C YGL242CP53066 181 aa10.31□□□□□ -0.76
PUP1YOR157C SPO1P53541 631 aa10.31□□□□□ -0.76
PUP1YOR157C RKM4Q12504 494 aa10.31□□□□□ -0.76
PUP1YOR157C NCB2Q92317 146 aa10.31□□□□□ -0.76
PUP1YOR157C RAD61Q99359 647 aa10.31□□□□□ -0.76
PUP1YOR157C DAL5P15365 543 aa10.3□□□□□ -0.76
PUP1YOR157C RTS1P38903 757 aa10.3□□□□□ -0.76
PUP1YOR157C KAR5Q04746 504 aa10.3□□□□□ -0.76
PUP1YOR157C SPT2P06843 333 aaPredicted RBP10.29□□□□□ -0.76
PUP1YOR157C SWI6P09959 803 aa10.29□□□□□ -0.76
PUP1YOR157C MRPL32P25348 183 aa10.29□□□□□ -0.76
PUP1YOR157C GUA1P38625 525 aaKnown RBP10.29□□□□□ -0.76
PUP1YOR157C EPS1P40557 701 aa10.29□□□□□ -0.76
PUP1YOR157C MRD1Q06106 887 aaKnown RBP10.29□□□□□ -0.76
PUP1YOR157C SNA3P14359 133 aa10.28□□□□□ -0.76
PUP1YOR157C IDI1P15496 288 aa10.28□□□□□ -0.76
PUP1YOR157C VPS8P39702 1274 aa10.28□□□□□ -0.76
PUP1YOR157C CTR1P49573 406 aa10.28□□□□□ -0.76
PUP1YOR157C ATG11Q12527 1178 aa10.28□□□□□ -0.76
PUP1YOR157C PRO3P32263 286 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms