RNA–Protein interactions for RNA: YOL067C

RTG1, Transcript of Transcription factor (bHLH) involved in interorganelle communication, yeast

Gene RTG1, Length 534 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG1	YOL067C	ECM30	Q06673	1274 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	TAH18	Q12181	623 aa		13.47	□□□□□ -0.25
RTG1	YOL067C	PRO3	P32263	286 aa	Known RBP	13.46	□□□□□ -0.25
RTG1	YOL067C	UTR4	P32626	227 aa		13.46	□□□□□ -0.25
RTG1	YOL067C	GPB2	P39717	880 aa		13.46	□□□□□ -0.25
RTG1	YOL067C	MDM20	Q12387	796 aa	Known RBP	13.46	□□□□□ -0.25
RTG1	YOL067C	SAM1	P10659	382 aa	Known RBP	13.45	□□□□□ -0.26
RTG1	YOL067C	RAD18	P10862	487 aa		13.45	□□□□□ -0.26
RTG1	YOL067C	SRP40	P32583	406 aa	Predicted RBP	13.45	□□□□□ -0.26
RTG1	YOL067C	RRP8	P38961	392 aa	Known RBP	13.45	□□□□□ -0.26
RTG1	YOL067C	YPL034W	Q03083	165 aa		13.45	□□□□□ -0.26
RTG1	YOL067C	MYO1	P08964	1928 aa		13.45	□□□□□ -0.26
RTG1	YOL067C	TUS1	Q06412	1307 aa		13.44	□□□□□ -0.26
RTG1	YOL067C	KTR2	P33550	425 aa		13.44	□□□□□ -0.26
RTG1	YOL067C	DBP1	P24784	617 aa	Known RBP	13.43	□□□□□ -0.26
RTG1	YOL067C	KTR1	P27810	393 aa	Known RBP	13.43	□□□□□ -0.26
RTG1	YOL067C	RGT1	P32862	1170 aa		13.43	□□□□□ -0.26
RTG1	YOL067C	RFC1	P38630	861 aa	Known RBP	13.43	□□□□□ -0.26
RTG1	YOL067C	VPS8	P39702	1274 aa		13.43	□□□□□ -0.26
RTG1	YOL067C	SOL4	P53315	255 aa		13.43	□□□□□ -0.26
RTG1	YOL067C	ALD6	P54115	500 aa	Known RBP	13.43	□□□□□ -0.26
RTG1	YOL067C	YDR461C-A	Q2V2P7	80 aa		13.43	□□□□□ -0.26
RTG1	YOL067C	DLD1	P32891	587 aa		13.42	□□□□□ -0.26
RTG1	YOL067C	SHP1	P34223	423 aa		13.42	□□□□□ -0.26
RTG1	YOL067C	OSH3	P38713	996 aa	Known RBP	13.42	□□□□□ -0.26
RTG1	YOL067C	UBP9	P39967	754 aa		13.42	□□□□□ -0.26
RTG1	YOL067C	AIM21	P40563	679 aa		13.42	□□□□□ -0.26
RTG1	YOL067C	BRE1	Q07457	700 aa	Known RBP	13.42	□□□□□ -0.26
RTG1	YOL067C	RPS15	Q01855	142 aa	Known RBP	13.41	□□□□□ -0.26
RTG1	YOL067C	PHO88	P38264	188 aa	Predicted RBP	13.4	□□□□□ -0.26
RTG1	YOL067C	KSP1	P38691	1029 aa	Known RBP	13.4	□□□□□ -0.26
RTG1	YOL067C	TMA64	Q04600	565 aa	Known RBP	13.4	□□□□□ -0.26
RTG1	YOL067C	HIP1	P06775	603 aa		13.39	□□□□□ -0.27
RTG1	YOL067C	STM1	P39015	273 aa	Known RBP	13.39	□□□□□ -0.27
RTG1	YOL067C	YGR125W	P53273	1036 aa		13.39	□□□□□ -0.27
RTG1	YOL067C	YAF9	P53930	226 aa		13.39	□□□□□ -0.27
RTG1	YOL067C	UFD2	P54860	961 aa		13.39	□□□□□ -0.27
RTG1	YOL067C	SLD5	Q03406	294 aa		13.39	□□□□□ -0.27
RTG1	YOL067C	CDC19	P00549	500 aa	Known RBP	13.38	□□□□□ -0.27
RTG1	YOL067C	CDC16	P09798	840 aa		13.38	□□□□□ -0.27
RTG1	YOL067C	RIT1	P23796	513 aa		13.38	□□□□□ -0.27
RTG1	YOL067C	WHI3	P34761	661 aa	Known RBP	13.38	□□□□□ -0.27
RTG1	YOL067C	YKR018C	P36114	725 aa		13.38	□□□□□ -0.27
RTG1	YOL067C	SCS3	P53012	380 aa		13.38	□□□□□ -0.27
RTG1	YOL067C	YGL039W	P53183	348 aa	Known RBP	13.38	□□□□□ -0.27
RTG1	YOL067C	SUE1	Q06524	206 aa		13.38	□□□□□ -0.27
RTG1	YOL067C	TGL1	P34163	548 aa		13.37	□□□□□ -0.27
RTG1	YOL067C	MET1	P36150	593 aa		13.37	□□□□□ -0.27
RTG1	YOL067C	TOM71	P38825	639 aa	Known RBP	13.37	□□□□□ -0.27
RTG1	YOL067C	HDA1	P53973	706 aa		13.37	□□□□□ -0.27
RTG1	YOL067C	DUS3	Q06053	668 aa	Known RBP	13.37	□□□□□ -0.27
RTG1	YOL067C	MIP1	P15801	1254 aa		13.36	□□□□□ -0.27
RTG1	YOL067C	OPI1	P21957	404 aa		13.36	□□□□□ -0.27
RTG1	YOL067C	YUR1	P26725	428 aa		13.36	□□□□□ -0.27
RTG1	YOL067C	MSC6	Q08818	692 aa	Known RBP	13.36	□□□□□ -0.27
RTG1	YOL067C	SKP2	P42843	763 aa		13.35	□□□□□ -0.27
RTG1	YOL067C	FOL1	P53848	824 aa		13.35	□□□□□ -0.27
RTG1	YOL067C	VPS30	Q02948	557 aa		13.35	□□□□□ -0.27
RTG1	YOL067C	NKP2	Q06162	153 aa		13.35	□□□□□ -0.27
RTG1	YOL067C	CSC1	Q06538	782 aa		13.35	□□□□□ -0.27
RTG1	YOL067C	MYO3	P36006	1272 aa		13.34	□□□□□ -0.27
RTG1	YOL067C	VPS29	P38759	282 aa		13.34	□□□□□ -0.27
RTG1	YOL067C	NOC2	P39744	710 aa	Known RBP	13.34	□□□□□ -0.27
RTG1	YOL067C	YFL040W	P43562	540 aa		13.34	□□□□□ -0.27
RTG1	YOL067C	EAR1	Q03212	550 aa		13.34	□□□□□ -0.27
RTG1	YOL067C	ISW2	Q08773	1120 aa		13.34	□□□□□ -0.27
RTG1	YOL067C	ANP1	P32629	500 aa		13.33	□□□□□ -0.28
RTG1	YOL067C	NDT80	P38830	627 aa		13.33	□□□□□ -0.28
RTG1	YOL067C	PTK2	P47116	818 aa	Known RBP	13.33	□□□□□ -0.28
RTG1	YOL067C	ERP3	Q12403	225 aa		13.33	□□□□□ -0.28
RTG1	YOL067C	PDC1	P06169	563 aa	Known RBP	13.32	□□□□□ -0.28
RTG1	YOL067C	FMP30	Q02883	468 aa		13.32	□□□□□ -0.28
RTG1	YOL067C	SPH1	Q06160	661 aa		13.32	□□□□□ -0.28
RTG1	YOL067C	UTP4	Q06679	776 aa	Known RBP	13.32	□□□□□ -0.28
RTG1	YOL067C	AHC1	Q12433	566 aa		13.32	□□□□□ -0.28
RTG1	YOL067C	RKM4	Q12504	494 aa		13.32	□□□□□ -0.28
RTG1	YOL067C	NUC1	P08466	329 aa		13.31	□□□□□ -0.28
RTG1	YOL067C	VPS45	P38932	577 aa		13.31	□□□□□ -0.28
RTG1	YOL067C	RIM20	Q12033	661 aa		13.31	□□□□□ -0.28
RTG1	YOL067C	MCR1	P36060	302 aa	Known RBP	13.3	□□□□□ -0.28
RTG1	YOL067C	POX1	P13711	748 aa		13.29	□□□□□ -0.28
RTG1	YOL067C	AVT3	P36062	692 aa		13.29	□□□□□ -0.28
RTG1	YOL067C	CTR1	P49573	406 aa		13.29	□□□□□ -0.28
RTG1	YOL067C	YMR321C	Q04898	105 aa		13.29	□□□□□ -0.28
RTG1	YOL067C	YDR524C-B	Q3E6R4	66 aa		13.29	□□□□□ -0.28
RTG1	YOL067C	RPL8B	P29453	256 aa	Known RBP	13.28	□□□□□ -0.28
RTG1	YOL067C	DBP7	P36120	742 aa	Known RBP	13.28	□□□□□ -0.28
RTG1	YOL067C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.27	□□□□□ -0.29	not detected
RTG1	YOL067C	REG2	P38232	338 aa		13.27	□□□□□ -0.29
RTG1	YOL067C	CSM2	P40465	213 aa		13.27	□□□□□ -0.29
RTG1	YOL067C	RPT6	Q01939	405 aa	Known RBP	13.27	□□□□□ -0.29
RTG1	YOL067C	TKL1	P23254	680 aa	Known RBP	13.26	□□□□□ -0.29
RTG1	YOL067C	MCM4	P30665	933 aa	Known RBP	13.26	□□□□□ -0.29
RTG1	YOL067C	VPS53	P47061	822 aa		13.26	□□□□□ -0.29
RTG1	YOL067C	DAK1	P54838	584 aa	Known RBP	13.26	□□□□□ -0.29
RTG1	YOL067C	SSF2	Q12153	453 aa	Predicted RBP	13.26	□□□□□ -0.29
RTG1	YOL067C	TRM11	Q12463	433 aa		13.26	□□□□□ -0.29
RTG1	YOL067C	TFC4	P33339	1025 aa		13.25	□□□□□ -0.29
RTG1	YOL067C	SRP54	P20424	541 aa	Known RBP	13.24	□□□□□ -0.29
RTG1	YOL067C	RER2	P35196	286 aa		13.24	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms