RNA–Protein interactions for RNA: YML120C

NDI1, Transcript of NADH:ubiquinone oxidoreductase, yeast

Gene NDI1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDI1	YML120C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.8	□□□□□ -0.52	not detected
NDI1	YML120C	OPI1	P21957	404 aa		11.8	□□□□□ -0.52
NDI1	YML120C	KTR1	P27810	393 aa	Known RBP	11.8	□□□□□ -0.52
NDI1	YML120C	CLA4	P48562	842 aa		11.8	□□□□□ -0.52
NDI1	YML120C	ECM30	Q06673	1274 aa		11.8	□□□□□ -0.52
NDI1	YML120C	MET7	Q08645	548 aa		11.8	□□□□□ -0.52
NDI1	YML120C	VPS24	P36095	224 aa	Known RBP	11.79	□□□□□ -0.52
NDI1	YML120C	PRY3	P47033	881 aa		11.79	□□□□□ -0.52
NDI1	YML120C	MRD1	Q06106	887 aa	Known RBP	11.79	□□□□□ -0.52
NDI1	YML120C	CHS3	P29465	1165 aa		11.78	□□□□□ -0.52
NDI1	YML120C	PES4	P39684	611 aa		11.78	□□□□□ -0.52
NDI1	YML120C	YKR018C	P36114	725 aa		11.77	□□□□□ -0.52
NDI1	YML120C	RRP8	P38961	392 aa	Known RBP	11.77	□□□□□ -0.52
NDI1	YML120C	DJP1	P40564	432 aa		11.77	□□□□□ -0.52
NDI1	YML120C	ALD6	P54115	500 aa	Known RBP	11.77	□□□□□ -0.52
NDI1	YML120C	RMD1	Q03441	430 aa		11.77	□□□□□ -0.52
NDI1	YML120C	SUT2	Q12286	268 aa		11.77	□□□□□ -0.52
NDI1	YML120C	YOR131C	Q12486	218 aa		11.77	□□□□□ -0.52
NDI1	YML120C	ECM29	P38737	1868 aa		11.77	□□□□□ -0.53
NDI1	YML120C	RGT1	P32862	1170 aa		11.76	□□□□□ -0.53
NDI1	YML120C	YKR023W	P36119	530 aa	Known RBP	11.76	□□□□□ -0.53
NDI1	YML120C	MET1	P36150	593 aa		11.76	□□□□□ -0.53
NDI1	YML120C	RFC1	P38630	861 aa	Known RBP	11.76	□□□□□ -0.53
NDI1	YML120C	CDC19	P00549	500 aa	Known RBP	11.76	□□□□□ -0.53
NDI1	YML120C	CHO2	P05374	869 aa	Known RBP	11.75	□□□□□ -0.53
NDI1	YML120C	VPS8	P39702	1274 aa		11.75	□□□□□ -0.53
NDI1	YML120C	PTK2	P47116	818 aa	Known RBP	11.75	□□□□□ -0.53
NDI1	YML120C	MDM20	Q12387	796 aa	Known RBP	11.75	□□□□□ -0.53
NDI1	YML120C	RAD18	P10862	487 aa		11.74	□□□□□ -0.53
NDI1	YML120C	RPS15	Q01855	142 aa	Known RBP	11.74	□□□□□ -0.53
NDI1	YML120C	DUS4	Q06063	367 aa		11.74	□□□□□ -0.53
NDI1	YML120C	SAM2	P19358	384 aa	Known RBP	11.73	□□□□□ -0.53
NDI1	YML120C	WHI3	P34761	661 aa	Known RBP	11.73	□□□□□ -0.53
NDI1	YML120C	UIP5	P36137	443 aa		11.73	□□□□□ -0.53
NDI1	YML120C	TOM71	P38825	639 aa	Known RBP	11.73	□□□□□ -0.53
NDI1	YML120C	STM1	P39015	273 aa	Known RBP	11.73	□□□□□ -0.53
NDI1	YML120C	FIR1	P40020	876 aa		11.73	□□□□□ -0.53
NDI1	YML120C	YFL040W	P43562	540 aa		11.73	□□□□□ -0.53
NDI1	YML120C	YGR125W	P53273	1036 aa		11.73	□□□□□ -0.53
NDI1	YML120C	BRE5	P53741	515 aa	Known RBP	11.73	□□□□□ -0.53
NDI1	YML120C	FMP30	Q02883	468 aa		11.73	□□□□□ -0.53
NDI1	YML120C	UTR4	P32626	227 aa		11.72	□□□□□ -0.53
NDI1	YML120C	AFG3	P39925	761 aa		11.72	□□□□□ -0.53
NDI1	YML120C	UBP9	P39967	754 aa		11.72	□□□□□ -0.53
NDI1	YML120C	YJR107W	P47145	328 aa		11.72	□□□□□ -0.53
NDI1	YML120C	YPL034W	Q03083	165 aa		11.72	□□□□□ -0.53
NDI1	YML120C	NOP58	Q12499	511 aa	Known RBP	11.72	□□□□□ -0.53
NDI1	YML120C	MSP1	P28737	362 aa		11.71	□□□□□ -0.53
NDI1	YML120C	MYO3	P36006	1272 aa		11.71	□□□□□ -0.53
NDI1	YML120C	PHO88	P38264	188 aa	Predicted RBP	11.71	□□□□□ -0.53
NDI1	YML120C	UFD2	P54860	961 aa		11.71	□□□□□ -0.53
NDI1	YML120C	EAR1	Q03212	550 aa		11.71	□□□□□ -0.53
NDI1	YML120C	ECM16	Q04217	1267 aa	Known RBP	11.71	□□□□□ -0.53
NDI1	YML120C	YPR117W	Q06116	2489 aa		11.71	□□□□□ -0.54
NDI1	YML120C	PRO3	P32263	286 aa	Known RBP	11.7	□□□□□ -0.54
NDI1	YML120C	NKP2	Q06162	153 aa		11.7	□□□□□ -0.54
NDI1	YML120C	SSF2	Q12153	453 aa	Predicted RBP	11.7	□□□□□ -0.54
NDI1	YML120C	SRP40	P32583	406 aa	Predicted RBP	11.7	□□□□□ -0.54
NDI1	YML120C	KSP1	P38691	1029 aa	Known RBP	11.7	□□□□□ -0.54
NDI1	YML120C	BUL2	Q03758	920 aa	Known RBP	11.7	□□□□□ -0.54
NDI1	YML120C	ACE2	P21192	770 aa		11.69	□□□□□ -0.54
NDI1	YML120C	BCS1	P32839	456 aa		11.69	□□□□□ -0.54
NDI1	YML120C	TGL1	P34163	548 aa		11.69	□□□□□ -0.54
NDI1	YML120C	FOL1	P53848	824 aa		11.69	□□□□□ -0.54
NDI1	YML120C	CSC1	Q06538	782 aa		11.69	□□□□□ -0.54
NDI1	YML120C	ARL1	P38116	183 aa	Known RBP	11.68	□□□□□ -0.54
NDI1	YML120C	VPS29	P38759	282 aa		11.68	□□□□□ -0.54
NDI1	YML120C	CTR9	P89105	1077 aa		11.68	□□□□□ -0.54
NDI1	YML120C	LSP1	Q12230	341 aa	Known RBP	11.68	□□□□□ -0.54
NDI1	YML120C	RIT1	P23796	513 aa		11.67	□□□□□ -0.54
NDI1	YML120C	ANP1	P32629	500 aa		11.67	□□□□□ -0.54
NDI1	YML120C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.67	□□□□□ -0.54	not detected
NDI1	YML120C	YVH1	Q02256	364 aa	Known RBP	11.67	□□□□□ -0.54
NDI1	YML120C	RIM20	Q12033	661 aa		11.67	□□□□□ -0.54
NDI1	YML120C	MAM3	Q12296	706 aa		11.67	□□□□□ -0.54
NDI1	YML120C	SAM1	P10659	382 aa	Known RBP	11.66	□□□□□ -0.54
NDI1	YML120C	DBP1	P24784	617 aa	Known RBP	11.66	□□□□□ -0.54
NDI1	YML120C	YGR130C	P53278	816 aa		11.66	□□□□□ -0.54
NDI1	YML120C	VPS30	Q02948	557 aa		11.66	□□□□□ -0.54
NDI1	YML120C	TMA64	Q04600	565 aa	Known RBP	11.66	□□□□□ -0.54
NDI1	YML120C	SPH1	Q06160	661 aa		11.66	□□□□□ -0.54
NDI1	YML120C	CLF1	Q12309	687 aa	Predicted RBP	11.66	□□□□□ -0.54
NDI1	YML120C	NUC1	P08466	329 aa		11.65	□□□□□ -0.54
NDI1	YML120C	CRG1	P38892	291 aa	RIP-Chip data	11.65	□□□□□ -0.54	not detected
NDI1	YML120C	VPS45	P38932	577 aa		11.65	□□□□□ -0.54
NDI1	YML120C	SPN1	Q06505	410 aa	Predicted RBP	11.65	□□□□□ -0.55
NDI1	YML120C	MSC6	Q08818	692 aa	Known RBP	11.65	□□□□□ -0.55
NDI1	YML120C	RLF2	Q12495	606 aa		11.65	□□□□□ -0.55
NDI1	YML120C	RAD50	P12753	1312 aa		11.64	□□□□□ -0.55
NDI1	YML120C	DLD1	P32891	587 aa		11.64	□□□□□ -0.55
NDI1	YML120C	RPT6	Q01939	405 aa	Known RBP	11.64	□□□□□ -0.55
NDI1	YML120C	RPL8B	P29453	256 aa	Known RBP	11.63	□□□□□ -0.55
NDI1	YML120C	MCR1	P36060	302 aa	Known RBP	11.63	□□□□□ -0.55
NDI1	YML120C	NOC2	P39744	710 aa	Known RBP	11.63	□□□□□ -0.55
NDI1	YML120C	GUD1	Q07729	489 aa		11.63	□□□□□ -0.55
NDI1	YML120C	YUR1	P26725	428 aa		11.62	□□□□□ -0.55
NDI1	YML120C	MCM4	P30665	933 aa	Known RBP	11.62	□□□□□ -0.55
NDI1	YML120C	TIM23	P32897	222 aa		11.62	□□□□□ -0.55
NDI1	YML120C	SHP1	P34223	423 aa		11.62	□□□□□ -0.55
NDI1	YML120C	AAP1	P37898	856 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms