RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	HST1	P53685	503 aa		13.1	□□□□□ -0.31
CWP1	YKL096W	CLF1	Q12309	687 aa	Predicted RBP	13.1	□□□□□ -0.31
CWP1	YKL096W	RNR3	P21672	869 aa	Known RBP	13.09	□□□□□ -0.31
CWP1	YKL096W	HYR1	P40581	163 aa	Known RBP	13.09	□□□□□ -0.31
CWP1	YKL096W	BUD6	P41697	788 aa		13.09	□□□□□ -0.31
CWP1	YKL096W	ENT3	P47160	408 aa		13.09	□□□□□ -0.31
CWP1	YKL096W	FOL1	P53848	824 aa		13.09	□□□□□ -0.31
CWP1	YKL096W	GAL2	P13181	574 aa		13.08	□□□□□ -0.32
CWP1	YKL096W	RPL8B	P29453	256 aa	Known RBP	13.08	□□□□□ -0.32
CWP1	YKL096W	CWC15	Q03772	175 aa	Known RBP	13.08	□□□□□ -0.32
CWP1	YKL096W	NUC1	P08466	329 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	SRP54	P20424	541 aa	Known RBP	13.07	□□□□□ -0.32
CWP1	YKL096W	ACE2	P21192	770 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	MSP1	P28737	362 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	TPS3	P38426	1054 aa	Known RBP	13.07	□□□□□ -0.32
CWP1	YKL096W	RPN10	P38886	268 aa	Known RBP	13.07	□□□□□ -0.32
CWP1	YKL096W	TIF4631	P39935	952 aa	Known RBP	13.07	□□□□□ -0.32
CWP1	YKL096W	VHR2	P40041	505 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	PEX21	P50091	288 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	HAP5	Q02516	242 aa		13.07	□□□□□ -0.32
CWP1	YKL096W	DIT2	P21595	489 aa		13.06	□□□□□ -0.32
CWP1	YKL096W	SPB4	P25808	606 aa	Predicted RBP	13.06	□□□□□ -0.32
CWP1	YKL096W	RFC5	P38251	354 aa		13.06	□□□□□ -0.32
CWP1	YKL096W	PEX14	P53112	341 aa		13.06	□□□□□ -0.32
CWP1	YKL096W	EAF7	P53911	425 aa	Known RBP	13.06	□□□□□ -0.32
CWP1	YKL096W	VPS30	Q02948	557 aa		13.06	□□□□□ -0.32
CWP1	YKL096W	LAP2	Q10740	671 aa		13.06	□□□□□ -0.32
CWP1	YKL096W	HCA4	P20448	770 aa	Known RBP	13.05	□□□□□ -0.32
CWP1	YKL096W	MBR1	P23493	339 aa		13.05	□□□□□ -0.32
CWP1	YKL096W	MAL33	P38157	468 aa		13.05	□□□□□ -0.32
CWP1	YKL096W	RXT2	P38255	430 aa		13.05	□□□□□ -0.32
CWP1	YKL096W	DSE3	Q08729	430 aa		13.05	□□□□□ -0.32
CWP1	YKL096W	SSA4	P22202	642 aa	Known RBP	13.04	□□□□□ -0.32
CWP1	YKL096W	TOM71	P38825	639 aa	Known RBP	13.04	□□□□□ -0.32
CWP1	YKL096W	PCI8	P40512	444 aa		13.04	□□□□□ -0.32
CWP1	YKL096W	YGL081W	P53156	320 aa		13.04	□□□□□ -0.32
CWP1	YKL096W	GDE1	Q02979	1223 aa		13.04	□□□□□ -0.32
CWP1	YKL096W	SAM2	P19358	384 aa	Known RBP	13.03	□□□□□ -0.32
CWP1	YKL096W	ROX1	P25042	368 aa		13.03	□□□□□ -0.32
CWP1	YKL096W	ACA1	P39970	489 aa		13.03	□□□□□ -0.32
CWP1	YKL096W	CIR1	P42940	261 aa		13.03	□□□□□ -0.32
CWP1	YKL096W	MDM1	Q01846	1127 aa		13.03	□□□□□ -0.32
CWP1	YKL096W	YDR341C	Q05506	607 aa	Known RBP	13.03	□□□□□ -0.32
CWP1	YKL096W	PEX19	Q07418	342 aa		13.03	□□□□□ -0.32
CWP1	YKL096W	CDC6	P09119	513 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	PGI1	P12709	554 aa	Known RBP	13.02	□□□□□ -0.33
CWP1	YKL096W	RDS1	P25611	832 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	ASF1	P32447	279 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	ELM1	P32801	640 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	UBP9	P39967	754 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	YIL089W	P40500	205 aa		13.02	□□□□□ -0.33
CWP1	YKL096W	TYW1	Q08960	810 aa	Known RBP	13.02	□□□□□ -0.33
CWP1	YKL096W	HSP82	P02829	709 aa	Known RBP	13.01	□□□□□ -0.33
CWP1	YKL096W	MET6	P05694	767 aa	Known RBP	13.01	□□□□□ -0.33
CWP1	YKL096W	SNF7	P39929	240 aa	Known RBP	13.01	□□□□□ -0.33
CWP1	YKL096W	DCS2	Q12123	353 aa		13.01	□□□□□ -0.33
CWP1	YKL096W	ERG12	P07277	443 aa		13	□□□□□ -0.33
CWP1	YKL096W	VPS1	P21576	704 aa	Known RBP	13	□□□□□ -0.33
CWP1	YKL096W	SPT21	P35209	758 aa		13	□□□□□ -0.33
CWP1	YKL096W	PNT1	P38969	423 aa		13	□□□□□ -0.33
CWP1	YKL096W	YGL138C	P53122	345 aa		13	□□□□□ -0.33
CWP1	YKL096W	KEX1	P09620	729 aa		12.99	□□□□□ -0.33
CWP1	YKL096W	KRS1	P15180	591 aa	Known RBP	12.99	□□□□□ -0.33
CWP1	YKL096W	VPS45	P38932	577 aa		12.99	□□□□□ -0.33
CWP1	YKL096W	RRT6	P53117	311 aa	Predicted RBP	12.99	□□□□□ -0.33
CWP1	YKL096W	SOL4	P53315	255 aa		12.99	□□□□□ -0.33
CWP1	YKL096W	FAR11	P53917	953 aa		12.99	□□□□□ -0.33
CWP1	YKL096W	GET3	Q12154	354 aa	Known RBP	12.99	□□□□□ -0.33
CWP1	YKL096W	GIN4	Q12263	1142 aa		12.99	□□□□□ -0.33
CWP1	YKL096W	CIT1	P00890	479 aa		12.98	□□□□□ -0.33
CWP1	YKL096W	STI1	P15705	589 aa	Known RBP RIP-Chip data	12.98	□□□□□ -0.33	not detected
CWP1	YKL096W	COG8	Q04632	607 aa		12.98	□□□□□ -0.33
CWP1	YKL096W	SUB2	Q07478	446 aa	Known RBP	12.98	□□□□□ -0.33
CWP1	YKL096W	CEX1	Q12453	761 aa		12.98	□□□□□ -0.33
CWP1	YKL096W	AIM44	Q99299	758 aa		12.98	□□□□□ -0.33
CWP1	YKL096W	CCT3	P39077	534 aa	Known RBP	12.97	□□□□□ -0.33
CWP1	YKL096W	PIL1	P53252	339 aa	Known RBP	12.97	□□□□□ -0.33
CWP1	YKL096W	MYO1	P08964	1928 aa		12.96	□□□□□ -0.33
CWP1	YKL096W	SEC20	P28791	383 aa		12.96	□□□□□ -0.33
CWP1	YKL096W	NAF1	P53919	492 aa	Known RBP	12.96	□□□□□ -0.33
CWP1	YKL096W	FRS2	P15625	503 aa	Known RBP	12.95	□□□□□ -0.34
CWP1	YKL096W	MAK11	P20484	414 aa	Known RBP	12.95	□□□□□ -0.34
CWP1	YKL096W	OCT1	P35999	772 aa		12.95	□□□□□ -0.34
CWP1	YKL096W	RFT1	P38206	574 aa	Predicted RBP	12.95	□□□□□ -0.34
CWP1	YKL096W	SUE1	Q06524	206 aa		12.95	□□□□□ -0.34
CWP1	YKL096W	ARL1	P38116	183 aa	Known RBP	12.94	□□□□□ -0.34
CWP1	YKL096W	CCT5	P40413	562 aa	Known RBP	12.94	□□□□□ -0.34
CWP1	YKL096W	ASE1	P50275	885 aa		12.94	□□□□□ -0.34
CWP1	YKL096W	LSB1	P53281	241 aa		12.94	□□□□□ -0.34
CWP1	YKL096W	KRE33	P53914	1056 aa	Known RBP	12.94	□□□□□ -0.34
CWP1	YKL096W	PEX29	Q03370	554 aa		12.94	□□□□□ -0.34
CWP1	YKL096W	GIS4	Q04233	774 aa		12.94	□□□□□ -0.34
CWP1	YKL096W	UTP4	Q06679	776 aa	Known RBP	12.94	□□□□□ -0.34
CWP1	YKL096W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	12.94	□□□□□ -0.34	not detected
CWP1	YKL096W	FBP1	P09201	348 aa		12.93	□□□□□ -0.34
CWP1	YKL096W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	12.93	□□□□□ -0.34	not detected
CWP1	YKL096W	RET3	P53600	189 aa		12.93	□□□□□ -0.34
CWP1	YKL096W	YML037C	Q03703	340 aa		12.93	□□□□□ -0.34
CWP1	YKL096W	VIP1	Q06685	1146 aa	Known RBP	12.93	□□□□□ -0.34
CWP1	YKL096W	APC11	Q12157	165 aa		12.93	□□□□□ -0.34

Retrieved 100 of 5,963 RNA–protein pairs in 51 ms