RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W SPR3P41901 512 aa5.04□□□□□ -1.6
AVT1YJR001W SRB7P47822 140 aa5.04□□□□□ -1.6
AVT1YJR001W FAA4P47912 694 aaKnown RBP5.04□□□□□ -1.6
AVT1YJR001W ATH1P48016 1211 aa5.04□□□□□ -1.6
AVT1YJR001W YGR237CP50089 785 aa5.04□□□□□ -1.6
AVT1YJR001W CTF4Q01454 927 aa5.04□□□□□ -1.6
AVT1YJR001W NTG2Q08214 380 aa5.04□□□□□ -1.6
AVT1YJR001W SGT2Q12118 346 aaKnown RBP5.04□□□□□ -1.6
AVT1YJR001W YBT1P32386 1661 aa5.04□□□□□ -1.6
AVT1YJR001W SAC3P46674 1301 aa5.04□□□□□ -1.6
AVT1YJR001W NUP159P40477 1460 aa5.03□□□□□ -1.6
AVT1YJR001W CYB2P00175 591 aa5.03□□□□□ -1.6
AVT1YJR001W PRI2P20457 528 aa5.03□□□□□ -1.6
AVT1YJR001W GCD6P32501 712 aaKnown RBP5.03□□□□□ -1.6
AVT1YJR001W PEX6P33760 1030 aa5.03□□□□□ -1.6
AVT1YJR001W RRN3P36070 627 aa5.03□□□□□ -1.6
AVT1YJR001W YGR053CP53234 283 aa5.03□□□□□ -1.6
AVT1YJR001W GGA1Q06336 557 aa5.03□□□□□ -1.6
AVT1YJR001W RSC2Q06488 889 aa5.03□□□□□ -1.6
AVT1YJR001W OPI10Q08202 246 aa5.03□□□□□ -1.6
AVT1YJR001W REC8Q12188 680 aa5.03□□□□□ -1.6
AVT1YJR001W SRF1Q12516 437 aa5.03□□□□□ -1.6
AVT1YJR001W SST2P11972 698 aaKnown RBP5.02□□□□□ -1.61
AVT1YJR001W DEP1P31385 405 aa5.02□□□□□ -1.61
AVT1YJR001W VPS35P34110 944 aa5.02□□□□□ -1.61
AVT1YJR001W NDE1P40215 560 aa5.02□□□□□ -1.61
AVT1YJR001W BFA1P47113 574 aa5.02□□□□□ -1.61
AVT1YJR001W SAM37P50110 327 aa5.02□□□□□ -1.61
AVT1YJR001W SPC105P53148 917 aa5.02□□□□□ -1.61
AVT1YJR001W VTC3Q02725 835 aa5.02□□□□□ -1.61
AVT1YJR001W TOS4Q06266 489 aa5.02□□□□□ -1.61
AVT1YJR001W IRC3Q06683 689 aa5.02□□□□□ -1.61
AVT1YJR001W GAS4Q08271 471 aa5.02□□□□□ -1.61
AVT1YJR001W YRR1Q12172 810 aa5.02□□□□□ -1.61
AVT1YJR001W CEX1Q12453 761 aa5.02□□□□□ -1.61
AVT1YJR001W YOL087CQ99247 1116 aa5.02□□□□□ -1.61
AVT1YJR001W CDC31P06704 161 aaKnown RBP5.02□□□□□ -1.61
AVT1YJR001W HOM3P10869 527 aa5.02□□□□□ -1.61
AVT1YJR001W SLY41P22215 453 aa5.02□□□□□ -1.61
AVT1YJR001W SFP1P32432 683 aa5.02□□□□□ -1.61
AVT1YJR001W YKL069WP36088 180 aa5.02□□□□□ -1.61
AVT1YJR001W BYE1P36106 594 aa5.02□□□□□ -1.61
AVT1YJR001W EXO84P38261 753 aa5.02□□□□□ -1.61
AVT1YJR001W MEP1P40260 492 aa5.02□□□□□ -1.61
AVT1YJR001W GPI8P49018 411 aa5.02□□□□□ -1.61
AVT1YJR001W RIA1P53893 1110 aa5.02□□□□□ -1.61
AVT1YJR001W COG6P53959 839 aa5.02□□□□□ -1.61
AVT1YJR001W PRP3Q03338 469 aaPredicted RBP5.02□□□□□ -1.61
AVT1YJR001W RIX7Q07844 837 aaKnown RBP5.02□□□□□ -1.61
AVT1YJR001W MPD2Q99316 277 aa5.02□□□□□ -1.61
AVT1YJR001W NPR1P22211 790 aa5.01□□□□□ -1.61
AVT1YJR001W BRF1P29056 596 aa5.01□□□□□ -1.61
AVT1YJR001W PPH3P32345 308 aa5.01□□□□□ -1.61
AVT1YJR001W SUV3P32580 737 aa5.01□□□□□ -1.61
AVT1YJR001W TRZ1P36159 838 aaPredicted RBP5.01□□□□□ -1.61
AVT1YJR001W RKM3P38222 552 aa5.01□□□□□ -1.61
AVT1YJR001W PIP2P52960 996 aa5.01□□□□□ -1.61
AVT1YJR001W APC5Q08683 685 aa5.01□□□□□ -1.61
AVT1YJR001W TSC13Q99190 310 aa5.01□□□□□ -1.61
AVT1YJR001W SSM4P40318 1319 aa5.01□□□□□ -1.61
AVT1YJR001W VPS15P22219 1454 aa5.01□□□□□ -1.61
AVT1YJR001W YRF1-1P0CX20 1796 aa5□□□□□ -1.61
AVT1YJR001W YRF1-5P0CX21 1796 aa5□□□□□ -1.61
AVT1YJR001W YRF1-8P0CX22 1796 aa5□□□□□ -1.61
AVT1YJR001W HXK1P04806 485 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W CAN1P04817 590 aa5□□□□□ -1.61
AVT1YJR001W CYT1P07143 309 aa5□□□□□ -1.61
AVT1YJR001W CDC34P14682 295 aa5□□□□□ -1.61
AVT1YJR001W VAN1P23642 535 aa5□□□□□ -1.61
AVT1YJR001W MSH3P25336 1018 aa5□□□□□ -1.61
AVT1YJR001W GFD2P25370 566 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W MRF1P30775 413 aaPredicted RBP5□□□□□ -1.61
AVT1YJR001W YBR071WP38243 211 aa5□□□□□ -1.61
AVT1YJR001W APE4P38821 490 aa5□□□□□ -1.61
AVT1YJR001W BUB1P41695 1021 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
AVT1YJR001W HLJ1P48353 224 aa5□□□□□ -1.61
AVT1YJR001W GPG1P53130 126 aa5□□□□□ -1.61
AVT1YJR001W RSC1P53236 928 aa5□□□□□ -1.61
AVT1YJR001W BNI4P53858 892 aa5□□□□□ -1.61
AVT1YJR001W YNL034WP53963 612 aa5□□□□□ -1.61
AVT1YJR001W YNL018CP53976 612 aa5□□□□□ -1.61
AVT1YJR001W SRP1Q02821 542 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W PHM6Q05637 104 aa5□□□□□ -1.61
AVT1YJR001W ESC2Q06340 456 aa5□□□□□ -1.61
AVT1YJR001W GRE2Q12068 342 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W SPS1P08458 490 aa5□□□□□ -1.61
AVT1YJR001W CLN1P20437 546 aa5□□□□□ -1.61
AVT1YJR001W MRS6P32864 603 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W DUT1P33317 147 aa5□□□□□ -1.61
AVT1YJR001W PMT3P47190 753 aa5□□□□□ -1.61
AVT1YJR001W HOL1P53389 586 aa5□□□□□ -1.61
AVT1YJR001W YNL058CP53947 316 aa5□□□□□ -1.61
AVT1YJR001W ALO1P54783 526 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W CSC1Q06538 782 aa5□□□□□ -1.61
AVT1YJR001W PSR1Q07800 427 aa5□□□□□ -1.61
AVT1YJR001W YVC1Q12324 675 aa5□□□□□ -1.61
AVT1YJR001W AIR2Q12476 344 aaKnown RBP5□□□□□ -1.61
AVT1YJR001W CAT8P39113 1433 aa4.99□□□□□ -1.61
AVT1YJR001W MET5P47169 1442 aa4.99□□□□□ -1.61
AVT1YJR001W TRP5P00931 707 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms