RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W ADP1P25371 1049 aa5.47□□□□□ -1.53
CIC1YHR052W RIM11P38615 370 aa5.47□□□□□ -1.53
CIC1YHR052W MSH4P40965 878 aaPredicted RBP5.47□□□□□ -1.53
CIC1YHR052W SSY1Q03770 852 aa5.47□□□□□ -1.53
CIC1YHR052W HTS1P07263 546 aaKnown RBP5.46□□□□□ -1.54
CIC1YHR052W THI80P35202 319 aa5.46□□□□□ -1.54
CIC1YHR052W GIP4P39732 760 aa5.46□□□□□ -1.54
CIC1YHR052W KAR5Q04746 504 aa5.46□□□□□ -1.54
CIC1YHR052W ECM2P38241 364 aaKnown RBP5.44□□□□□ -1.54
CIC1YHR052W MEC3Q02574 474 aa5.44□□□□□ -1.54
CIC1YHR052W TRE1Q08919 783 aa5.44□□□□□ -1.54
CIC1YHR052W GEF1P37020 779 aa5.43□□□□□ -1.54
CIC1YHR052W REI1P38344 393 aaPredicted RBP5.43□□□□□ -1.54
CIC1YHR052W PEX7P39108 375 aa5.43□□□□□ -1.54
CIC1YHR052W ALT1P52893 592 aa5.43□□□□□ -1.54
CIC1YHR052W YVC1Q12324 675 aa5.43□□□□□ -1.54
CIC1YHR052W PRO1P32264 428 aa5.42□□□□□ -1.54
CIC1YHR052W GLO3P38682 493 aaKnown RBP5.42□□□□□ -1.54
CIC1YHR052W ATG1P53104 897 aa5.42□□□□□ -1.54
CIC1YHR052W UTP22P53254 1237 aaPredicted RBP5.42□□□□□ -1.54
CIC1YHR052W LPX1Q12405 387 aaKnown RBP5.42□□□□□ -1.54
CIC1YHR052W PRP5P21372 849 aaPredicted RBP5.41□□□□□ -1.54
CIC1YHR052W QDR1P40475 563 aa5.41□□□□□ -1.54
CIC1YHR052W ELA1P53861 379 aaPredicted RBP5.41□□□□□ -1.54
CIC1YHR052W ORC3P54790 616 aa5.41□□□□□ -1.54
CIC1YHR052W NFS1P25374 497 aa5.4□□□□□ -1.54
CIC1YHR052W CDC3P32457 520 aaKnown RBP5.4□□□□□ -1.54
CIC1YHR052W RSC4Q02206 625 aa5.4□□□□□ -1.54
CIC1YHR052W MSH6Q03834 1242 aa5.4□□□□□ -1.54
CIC1YHR052W PRP6P19735 899 aaPredicted RBP5.39□□□□□ -1.55
CIC1YHR052W FLR1P38124 548 aa5.39□□□□□ -1.55
CIC1YHR052W PTC7P38797 343 aa5.39□□□□□ -1.55
CIC1YHR052W YGR045CP53229 120 aa5.39□□□□□ -1.55
CIC1YHR052W UFD2P54860 961 aa5.39□□□□□ -1.55
CIC1YHR052W AIM3P38266 947 aaKnown RBP5.38□□□□□ -1.55
CIC1YHR052W GTS1P40956 396 aa5.38□□□□□ -1.55
CIC1YHR052W TY1A-LR4P0C2I8 440 aaKnown RBP5.37□□□□□ -1.55
CIC1YHR052W TY1A-DR6P0CX70 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-ER1P0CX71 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-LR2P0CX72 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-PLP0CX73 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-JR1P0CX74 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-LR3P0CX75 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-ML2P0CX76 440 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-GR1Q12085 440 aa5.37□□□□□ -1.55
CIC1YHR052W YDL177CQ12257 170 aa5.37□□□□□ -1.55
CIC1YHR052W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.37□□□□□ -1.55
CIC1YHR052W TY1A-OLQ92392 440 aaKnown RBP5.37□□□□□ -1.55
CIC1YHR052W TRL1P09880 827 aaKnown RBP5.36□□□□□ -1.55
CIC1YHR052W SMY2P32909 740 aaKnown RBP5.36□□□□□ -1.55
CIC1YHR052W ACF4P47129 309 aa5.36□□□□□ -1.55
CIC1YHR052W MRPL22P53881 309 aa5.35□□□□□ -1.55
CIC1YHR052W TRS120Q04183 1289 aa5.35□□□□□ -1.55
CIC1YHR052W TAF7Q05021 590 aa5.35□□□□□ -1.55
CIC1YHR052W AVO1Q08236 1176 aa5.35□□□□□ -1.55
CIC1YHR052W GRS1P38088 690 aaKnown RBP5.34□□□□□ -1.55
CIC1YHR052W ETP1P38748 585 aaKnown RBP5.34□□□□□ -1.55
CIC1YHR052W ERP5P38819 212 aa5.34□□□□□ -1.55
CIC1YHR052W YBL113CQ7M4S9 792 aa5.34□□□□□ -1.55
CIC1YHR052W FLP1P03870 423 aa5.33□□□□□ -1.56
CIC1YHR052W NNK1P36003 928 aa5.33□□□□□ -1.56
CIC1YHR052W NMD3P38861 518 aaKnown RBP5.33□□□□□ -1.56
CIC1YHR052W SAP155P43612 1002 aa5.33□□□□□ -1.56
CIC1YHR052W YNL011CP53980 444 aa5.33□□□□□ -1.56
CIC1YHR052W HAT1Q12341 374 aa5.33□□□□□ -1.56
CIC1YHR052W MDJ2P42834 146 aa5.32□□□□□ -1.56
CIC1YHR052W NUT1P53114 1132 aa5.32□□□□□ -1.56
CIC1YHR052W YAF9P53930 226 aa5.32□□□□□ -1.56
CIC1YHR052W BSC2Q05611 235 aa5.32□□□□□ -1.56
CIC1YHR052W HDA2Q06629 674 aa5.32□□□□□ -1.56
CIC1YHR052W PUS7Q08647 676 aaKnown RBP5.32□□□□□ -1.56
CIC1YHR052W MNL2Q12205 849 aa5.32□□□□□ -1.56
CIC1YHR052W MCM5P29496 775 aaKnown RBP5.31□□□□□ -1.56
CIC1YHR052W TPP1Q03796 238 aa5.31□□□□□ -1.56
CIC1YHR052W SLS1P42900 643 aa5.3□□□□□ -1.56
CIC1YHR052W MON1P53129 644 aa5.3□□□□□ -1.56
CIC1YHR052W RIM8P53179 542 aa5.3□□□□□ -1.56
CIC1YHR052W CDC55Q00362 526 aa5.3□□□□□ -1.56
CIC1YHR052W PMT7Q06644 662 aa5.3□□□□□ -1.56
CIC1YHR052W FRT1Q99332 602 aa5.3□□□□□ -1.56
CIC1YHR052W TOD6P34219 525 aa5.29□□□□□ -1.56
CIC1YHR052W NUT2Q06213 157 aa5.29□□□□□ -1.56
CIC1YHR052W INP54Q08227 384 aaKnown RBP5.29□□□□□ -1.56
CIC1YHR052W YPL277CQ08989 487 aa5.28□□□□□ -1.56
CIC1YHR052W YKL077WP36081 392 aa5.27□□□□□ -1.57
CIC1YHR052W ARL1P38116 183 aaKnown RBP5.27□□□□□ -1.57
CIC1YHR052W SSF1P38789 453 aaPredicted RBP5.27□□□□□ -1.57
CIC1YHR052W EXO5P38289 585 aa5.26□□□□□ -1.57
CIC1YHR052W NEM1P38757 446 aa5.26□□□□□ -1.57
CIC1YHR052W SOD2P00447 233 aa5.25□□□□□ -1.57
CIC1YHR052W SAM35P14693 329 aa5.25□□□□□ -1.57
CIC1YHR052W YLR257WQ06146 321 aaKnown RBP5.25□□□□□ -1.57
CIC1YHR052W GPI13Q07830 1017 aa5.25□□□□□ -1.57
CIC1YHR052W RPS13P05756 151 aaKnown RBP5.24□□□□□ -1.57
CIC1YHR052W RET1P22276 1149 aaKnown RBP5.24□□□□□ -1.57
CIC1YHR052W YHL012WP38709 493 aa5.24□□□□□ -1.57
CIC1YHR052W YHL050CP38721 697 aa5.24□□□□□ -1.57
CIC1YHR052W YHR219WP38900 624 aa5.24□□□□□ -1.57
CIC1YHR052W YAR028WP39548 234 aa5.24□□□□□ -1.57
CIC1YHR052W RVS167P39743 482 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms