RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C KAR5Q04746 504 aa8.7□□□□□ -1.02
PUP2YGR253C PDR18P53756 1333 aa8.7□□□□□ -1.02
PUP2YGR253C CDC19P00549 500 aaKnown RBP8.69□□□□□ -1.02
PUP2YGR253C DBP1P24784 617 aaKnown RBP8.69□□□□□ -1.02
PUP2YGR253C UTR4P32626 227 aa8.69□□□□□ -1.02
PUP2YGR253C PBY1P38254 753 aa8.69□□□□□ -1.02
PUP2YGR253C ENP2P48234 707 aaKnown RBP8.69□□□□□ -1.02
PUP2YGR253C SOL4P53315 255 aa8.69□□□□□ -1.02
PUP2YGR253C AHC1Q12433 566 aa8.69□□□□□ -1.02
PUP2YGR253C TUS1Q06412 1307 aa8.69□□□□□ -1.02
PUP2YGR253C ECM29P38737 1868 aa8.68□□□□□ -1.02
PUP2YGR253C HIP1P06775 603 aa8.68□□□□□ -1.02
PUP2YGR253C CHS3P29465 1165 aa8.68□□□□□ -1.02
PUP2YGR253C YHL050CP38721 697 aa8.68□□□□□ -1.02
PUP2YGR253C TOM71P38825 639 aaKnown RBP8.68□□□□□ -1.02
PUP2YGR253C RTS1P38903 757 aa8.68□□□□□ -1.02
PUP2YGR253C FPR3P38911 411 aaKnown RBP8.68□□□□□ -1.02
PUP2YGR253C VID27P40157 782 aa8.68□□□□□ -1.02
PUP2YGR253C ALD6P54115 500 aaKnown RBP8.68□□□□□ -1.02
PUP2YGR253C PUF6Q04373 656 aaKnown RBP8.68□□□□□ -1.02
PUP2YGR253C MRD1Q06106 887 aaKnown RBP8.68□□□□□ -1.02
PUP2YGR253C RAD61Q99359 647 aa8.68□□□□□ -1.02
PUP2YGR253C RAD18P10862 487 aa8.67□□□□□ -1.02
PUP2YGR253C SAM2P19358 384 aaKnown RBP8.67□□□□□ -1.02
PUP2YGR253C ECM21P38167 1117 aaKnown RBP8.67□□□□□ -1.02
PUP2YGR253C NMD2P38798 1089 aaKnown RBP8.67□□□□□ -1.02
PUP2YGR253C SLN1P39928 1220 aaPredicted RBP8.67□□□□□ -1.02
PUP2YGR253C YGR125WP53273 1036 aa8.67□□□□□ -1.02
PUP2YGR253C YMR084WA2P2R3 262 aa8.66□□□□□ -1.02
PUP2YGR253C SAM1P10659 382 aaKnown RBP8.66□□□□□ -1.02
PUP2YGR253C MIP1P15801 1254 aa8.66□□□□□ -1.02
PUP2YGR253C PIB2P53191 635 aa8.66□□□□□ -1.02
PUP2YGR253C COQ1P18900 473 aa8.65□□□□□ -1.02
PUP2YGR253C ACE2P21192 770 aa8.65□□□□□ -1.02
PUP2YGR253C MSC7P38694 644 aa8.65□□□□□ -1.02
PUP2YGR253C PTK2P47116 818 aaKnown RBP8.65□□□□□ -1.02
PUP2YGR253C SLD5Q03406 294 aa8.65□□□□□ -1.02
PUP2YGR253C MSC6Q08818 692 aaKnown RBP8.65□□□□□ -1.02
PUP2YGR253C TAH18Q12181 623 aa8.65□□□□□ -1.02
PUP2YGR253C RRP8P38961 392 aaKnown RBP8.64□□□□□ -1.03
PUP2YGR253C VPS8P39702 1274 aa8.64□□□□□ -1.03
PUP2YGR253C NOC2P39744 710 aaKnown RBP8.64□□□□□ -1.03
PUP2YGR253C SKP2P42843 763 aa8.64□□□□□ -1.03
PUP2YGR253C PDC1P06169 563 aaKnown RBP8.63□□□□□ -1.03
PUP2YGR253C PHO88P38264 188 aaPredicted RBP8.63□□□□□ -1.03
PUP2YGR253C UBP9P39967 754 aa8.63□□□□□ -1.03
PUP2YGR253C BBC1P47068 1157 aa8.63□□□□□ -1.03
PUP2YGR253C POL32P47110 350 aa8.63□□□□□ -1.03
PUP2YGR253C PKH3Q03306 898 aaPredicted RBP8.63□□□□□ -1.03
PUP2YGR253C YDR524C-BQ3E6R4 66 aa8.63□□□□□ -1.03
PUP2YGR253C TGL1P34163 548 aa8.62□□□□□ -1.03
PUP2YGR253C SHP1P34223 423 aa8.62□□□□□ -1.03
PUP2YGR253C OSH3P38713 996 aaKnown RBP8.62□□□□□ -1.03
PUP2YGR253C VPS29P38759 282 aa8.62□□□□□ -1.03
PUP2YGR253C CSC1Q06538 782 aa8.62□□□□□ -1.03
PUP2YGR253C YDR461C-AQ2V2P7 80 aa8.62□□□□□ -1.03
PUP2YGR253C LAM4P38800 1345 aa8.61□□□□□ -1.03
PUP2YGR253C CHO2P05374 869 aaKnown RBP8.61□□□□□ -1.03
PUP2YGR253C YUR1P26725 428 aa8.61□□□□□ -1.03
PUP2YGR253C GRS1P38088 690 aaKnown RBP8.61□□□□□ -1.03
PUP2YGR253C VPS53P47061 822 aa8.61□□□□□ -1.03
PUP2YGR253C SCS3P53012 380 aa8.61□□□□□ -1.03
PUP2YGR253C YGL039WP53183 348 aaKnown RBP8.61□□□□□ -1.03
PUP2YGR253C TMA64Q04600 565 aaKnown RBP8.61□□□□□ -1.03
PUP2YGR253C HEM1P09950 548 aaPredicted RBP8.6□□□□□ -1.03
PUP2YGR253C PRO3P32263 286 aaKnown RBP8.6□□□□□ -1.03
PUP2YGR253C MRPS35P53292 345 aa8.6□□□□□ -1.03
PUP2YGR253C RPS15Q01855 142 aaKnown RBP8.6□□□□□ -1.03
PUP2YGR253C DUS3Q06053 668 aaKnown RBP8.6□□□□□ -1.03
PUP2YGR253C SPH1Q06160 661 aa8.6□□□□□ -1.03
PUP2YGR253C ERP3Q12403 225 aa8.6□□□□□ -1.03
PUP2YGR253C LDB19Q12502 818 aa8.6□□□□□ -1.03
PUP2YGR253C YDR034W-BQ6Q5X2 51 aa8.6□□□□□ -1.03
PUP2YGR253C POX1P13711 748 aa8.59□□□□□ -1.03
PUP2YGR253C MCM4P30665 933 aaKnown RBP8.59□□□□□ -1.03
PUP2YGR253C PES4P39684 611 aa8.59□□□□□ -1.03
PUP2YGR253C FOL1P53848 824 aa8.59□□□□□ -1.03
PUP2YGR253C DAK1P54838 584 aaKnown RBP8.59□□□□□ -1.03
PUP2YGR253C BRE1Q07457 700 aaKnown RBP8.59□□□□□ -1.03
PUP2YGR253C RTP1Q12751 981 aa8.59□□□□□ -1.03
PUP2YGR253C KTR1P27810 393 aaKnown RBP8.58□□□□□ -1.04
PUP2YGR253C MCR1P36060 302 aaKnown RBP8.58□□□□□ -1.04
PUP2YGR253C VPS45P38932 577 aa8.58□□□□□ -1.04
PUP2YGR253C UFD2P54860 961 aa8.58□□□□□ -1.04
PUP2YGR253C OPI1P21957 404 aa8.57□□□□□ -1.04
PUP2YGR253C RIT1P23796 513 aa8.57□□□□□ -1.04
PUP2YGR253C IRE1P32361 1115 aa8.57□□□□□ -1.04
PUP2YGR253C TFC4P33339 1025 aa8.57□□□□□ -1.04
PUP2YGR253C GPT2P36148 743 aa8.57□□□□□ -1.04
PUP2YGR253C MET1P36150 593 aa8.57□□□□□ -1.04
PUP2YGR253C REG2P38232 338 aa8.57□□□□□ -1.04
PUP2YGR253C VPS30Q02948 557 aa8.57□□□□□ -1.04
PUP2YGR253C TRM11Q12463 433 aa8.57□□□□□ -1.04
PUP2YGR253C RKM4Q12504 494 aa8.57□□□□□ -1.04
PUP2YGR253C TKL1P23254 680 aaKnown RBP8.56□□□□□ -1.04
PUP2YGR253C TIM23P32897 222 aa8.56□□□□□ -1.04
PUP2YGR253C DBP7P36120 742 aaKnown RBP8.56□□□□□ -1.04
PUP2YGR253C STM1P39015 273 aaKnown RBP8.56□□□□□ -1.04
PUP2YGR253C YMR321CQ04898 105 aa8.56□□□□□ -1.04
PUP2YGR253C SUE1Q06524 206 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms