RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W VAN1P23642 535 aa4.17□□□□□ -1.74
CAF130YGR134W VAC17P25591 423 aa4.17□□□□□ -1.74
CAF130YGR134W ISC10P32645 267 aa4.17□□□□□ -1.74
CAF130YGR134W UPF3P48412 387 aaKnown RBP4.17□□□□□ -1.74
CAF130YGR134W RPA14P50106 137 aa4.17□□□□□ -1.74
CAF130YGR134W NPY1P53164 384 aa4.17□□□□□ -1.74
CAF130YGR134W TFC6Q06339 672 aa4.17□□□□□ -1.74
CAF130YGR134W BRE4Q07660 1125 aa4.17□□□□□ -1.74
CAF130YGR134W MMS22Q06164 1454 aa4.17□□□□□ -1.74
CAF130YGR134W ESP1Q03018 1630 aa4.16□□□□□ -1.74
CAF130YGR134W TRK1P12685 1235 aa4.16□□□□□ -1.74
CAF130YGR134W YHL041WP38730 149 aa4.16□□□□□ -1.74
CAF130YGR134W YGR250CP53316 781 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W VIP1Q06685 1146 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W TRS33Q99394 268 aa4.16□□□□□ -1.74
CAF130YGR134W AGP1P25376 633 aa4.16□□□□□ -1.74
CAF130YGR134W DPB3P27344 201 aa4.16□□□□□ -1.74
CAF130YGR134W URA1P28272 314 aaPredicted RBP4.16□□□□□ -1.74
CAF130YGR134W NIT1P40447 199 aa4.16□□□□□ -1.74
CAF130YGR134W UTP8P53276 713 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W RRP6Q12149 733 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W PGA3Q12746 312 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W TY1B-AO13527 1196 aaKnown RBP4.16□□□□□ -1.74
CAF130YGR134W HOM3P10869 527 aa4.16□□□□□ -1.74
CAF130YGR134W PEX6P33760 1030 aa4.16□□□□□ -1.74
CAF130YGR134W TFB2Q02939 513 aa4.16□□□□□ -1.74
CAF130YGR134W CYT1P07143 309 aa4.15□□□□□ -1.74
CAF130YGR134W KCC4P25389 1037 aa4.15□□□□□ -1.74
CAF130YGR134W HBS1P32769 611 aaKnown RBP4.15□□□□□ -1.74
CAF130YGR134W YAP5P40574 245 aa4.15□□□□□ -1.74
CAF130YGR134W FOX2Q02207 900 aaKnown RBP4.15□□□□□ -1.74
CAF130YGR134W SSP2Q08646 371 aa4.15□□□□□ -1.74
CAF130YGR134W YDR056CQ12025 205 aa4.15□□□□□ -1.74
CAF130YGR134W SWR1Q05471 1514 aa4.15□□□□□ -1.75
CAF130YGR134W MRPL33P20084 86 aa4.15□□□□□ -1.75
CAF130YGR134W NTH2P35172 780 aa4.15□□□□□ -1.75
CAF130YGR134W APM2P38700 605 aa4.15□□□□□ -1.75
CAF130YGR134W NDE1P40215 560 aa4.15□□□□□ -1.75
CAF130YGR134W SAP155P43612 1002 aa4.15□□□□□ -1.75
CAF130YGR134W TRS130Q03660 1102 aa4.15□□□□□ -1.75
CAF130YGR134W BUL2Q03758 920 aaKnown RBP4.15□□□□□ -1.75
CAF130YGR134W MCD1Q12158 566 aa4.15□□□□□ -1.75
CAF130YGR134W TPD3P31383 635 aa4.14□□□□□ -1.75
CAF130YGR134W GUT2P32191 649 aa4.14□□□□□ -1.75
CAF130YGR134W CCC2P38995 1004 aa4.14□□□□□ -1.75
CAF130YGR134W GDH3P39708 457 aa4.14□□□□□ -1.75
CAF130YGR134W SAM37P50110 327 aa4.14□□□□□ -1.75
CAF130YGR134W UME1Q03010 460 aa4.14□□□□□ -1.75
CAF130YGR134W REH1Q06709 432 aa4.14□□□□□ -1.75
CAF130YGR134W CDC45Q08032 650 aa4.14□□□□□ -1.75
CAF130YGR134W YPL066WQ12194 479 aa4.14□□□□□ -1.75
CAF130YGR134W PDC1P06169 563 aaKnown RBP4.14□□□□□ -1.75
CAF130YGR134W MCM5P29496 775 aaKnown RBP4.14□□□□□ -1.75
CAF130YGR134W RDH54P38086 958 aa4.14□□□□□ -1.75
CAF130YGR134W PRY3P47033 881 aa4.14□□□□□ -1.75
CAF130YGR134W YNL058CP53947 316 aa4.14□□□□□ -1.75
CAF130YGR134W BSC2Q05611 235 aa4.14□□□□□ -1.75
CAF130YGR134W YPL191CQ08930 360 aa4.14□□□□□ -1.75
CAF130YGR134W FLP1P03870 423 aa4.14□□□□□ -1.75
CAF130YGR134W SWI5P08153 709 aa4.14□□□□□ -1.75
CAF130YGR134W SBP1P10080 294 aaKnown RBP4.14□□□□□ -1.75
CAF130YGR134W VBA5P36172 582 aa4.14□□□□□ -1.75
CAF130YGR134W APE4P38821 490 aa4.14□□□□□ -1.75
CAF130YGR134W IRR1P40541 1150 aa4.14□□□□□ -1.75
CAF130YGR134W YGR125WP53273 1036 aa4.14□□□□□ -1.75
CAF130YGR134W CMR1Q12510 522 aaKnown RBP4.14□□□□□ -1.75
CAF130YGR134W TY4B-PA0A0B7P3V8 1104 aa4.13□□□□□ -1.75
CAF130YGR134W RAM1P22007 431 aa4.13□□□□□ -1.75
CAF130YGR134W NIT2P47016 307 aa4.13□□□□□ -1.75
CAF130YGR134W NUT1P53114 1132 aa4.13□□□□□ -1.75
CAF130YGR134W MTQ2Q03920 221 aaPredicted RBP4.13□□□□□ -1.75
CAF130YGR134W BDS1Q08347 646 aa4.13□□□□□ -1.75
CAF130YGR134W TY4A-HQ6Q5P6 413 aa4.13□□□□□ -1.75
CAF130YGR134W HSP82P02829 709 aaKnown RBP4.13□□□□□ -1.75
CAF130YGR134W PRP40P33203 583 aaKnown RBP4.13□□□□□ -1.75
CAF130YGR134W BLI1P35727 113 aa4.13□□□□□ -1.75
CAF130YGR134W YJR115WP47152 169 aa4.13□□□□□ -1.75
CAF130YGR134W PMT3P47190 753 aa4.13□□□□□ -1.75
CAF130YGR134W RSC1P53236 928 aa4.13□□□□□ -1.75
CAF130YGR134W YAP1802P53309 568 aa4.13□□□□□ -1.75
CAF130YGR134W ULP1Q02724 621 aa4.13□□□□□ -1.75
CAF130YGR134W RTT10Q08924 1013 aa4.13□□□□□ -1.75
CAF130YGR134W MED1Q12321 566 aa4.13□□□□□ -1.75
CAF130YGR134W MOD5P07884 428 aa4.13□□□□□ -1.75
CAF130YGR134W NAT1P12945 854 aaKnown RBP4.13□□□□□ -1.75
CAF130YGR134W PCL2P25693 308 aa4.13□□□□□ -1.75
CAF130YGR134W DBF20P32328 564 aa4.13□□□□□ -1.75
CAF130YGR134W MCM10P32354 571 aa4.13□□□□□ -1.75
CAF130YGR134W NAB2P32505 525 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
CAF130YGR134W PEP7P32609 515 aa4.13□□□□□ -1.75
CAF130YGR134W SRB7P47822 140 aa4.13□□□□□ -1.75
CAF130YGR134W YGR016WP53209 190 aa4.13□□□□□ -1.75
CAF130YGR134W ADI1Q03677 179 aa4.13□□□□□ -1.75
CAF130YGR134W DBP10Q12389 995 aaKnown RBP4.13□□□□□ -1.75
CAF130YGR134W POL1P13382 1468 aa4.12□□□□□ -1.75
CAF130YGR134W NUP170P38181 1502 aa4.12□□□□□ -1.75
CAF130YGR134W ANP1P32629 500 aa4.12□□□□□ -1.75
CAF130YGR134W APL2P36000 726 aaPredicted RBP4.12□□□□□ -1.75
CAF130YGR134W GGA2P38817 585 aaKnown RBP4.12□□□□□ -1.75
CAF130YGR134W ALA1P40825 983 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 164.7 ms