RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W DRS1P32892 752 aaKnown RBP7.42□□□□□ -1.22
CAF130YGR134W TFA1P36100 482 aa7.08□□□□□ -1.28
CAF130YGR134W MTC1P47018 478 aaKnown RBP6.76□□□□□ -1.33
CAF130YGR134W BFR2Q06631 534 aaKnown RBP6.69□□□□□ -1.34
CAF130YGR134W AVT3P36062 692 aa6.47□□□□□ -1.37
CAF130YGR134W RQC2Q12532 1038 aaKnown RBP6.44□□□□□ -1.38
CAF130YGR134W TAF7Q05021 590 aa6.41□□□□□ -1.38
CAF130YGR134W DIP2Q12220 943 aaPredicted RBP6.12□□□□□ -1.43
CAF130YGR134W DMA1P38823 416 aa6.02□□□□□ -1.45
CAF130YGR134W LEO1P38439 464 aa5.98□□□□□ -1.45
CAF130YGR134W ABP1P15891 592 aaKnown RBP5.76□□□□□ -1.49
CAF130YGR134W SAS10Q12136 610 aaPredicted RBP5.7□□□□□ -1.5
CAF130YGR134W LEU3P08638 886 aa5.68□□□□□ -1.5
CAF130YGR134W IFH1P39520 1085 aa5.61□□□□□ -1.51
CAF130YGR134W ORC1P54784 914 aaPredicted RBP5.52□□□□□ -1.53
CAF130YGR134W DMA2P53924 522 aa5.48□□□□□ -1.53
CAF130YGR134W RSE1Q04693 1361 aaKnown RBP5.46□□□□□ -1.53
CAF130YGR134W PTP3P40048 928 aa5.46□□□□□ -1.54
CAF130YGR134W RIM101P33400 625 aa5.43□□□□□ -1.54
CAF130YGR134W IOC4Q04213 475 aa5.42□□□□□ -1.54
CAF130YGR134W SPT21P35209 758 aa5.41□□□□□ -1.54
CAF130YGR134W NAP1P25293 417 aaKnown RBP5.39□□□□□ -1.55
CAF130YGR134W SSP1P38871 571 aa5.38□□□□□ -1.55
CAF130YGR134W RLF2Q12495 606 aa5.34□□□□□ -1.55
CAF130YGR134W RPN1P38764 993 aaKnown RBP5.32□□□□□ -1.56
CAF130YGR134W OXP1P28273 1286 aa5.32□□□□□ -1.56
CAF130YGR134W NOP8Q08287 484 aaPredicted RBP5.3□□□□□ -1.56
CAF130YGR134W CKB1P43639 278 aa5.26□□□□□ -1.57
CAF130YGR134W YLR271WQ06152 274 aa5.26□□□□□ -1.57
CAF130YGR134W YPR148CQ06523 435 aa5.21□□□□□ -1.57
CAF130YGR134W RPL17AP05740 184 aaKnown RBP5.21□□□□□ -1.58
CAF130YGR134W RPL17BP46990 184 aaKnown RBP5.21□□□□□ -1.58
CAF130YGR134W YML020WQ03722 664 aa5.15□□□□□ -1.59
CAF130YGR134W CST9Q06032 482 aa5.14□□□□□ -1.59
CAF130YGR134W RPG1P38249 964 aaKnown RBP5.14□□□□□ -1.59
CAF130YGR134W ISW2Q08773 1120 aa5.13□□□□□ -1.59
CAF130YGR134W MGA2P40578 1113 aa5.13□□□□□ -1.59
CAF130YGR134W DSF2P38213 736 aa5.11□□□□□ -1.59
CAF130YGR134W ATG36P46983 293 aa5.1□□□□□ -1.59
CAF130YGR134W MAM3Q12296 706 aa5.1□□□□□ -1.59
CAF130YGR134W PSD2P53037 1138 aaKnown RBP5.08□□□□□ -1.6
CAF130YGR134W URN1Q06525 465 aaKnown RBP5.08□□□□□ -1.6
CAF130YGR134W MRX12P47084 519 aa5.07□□□□□ -1.6
CAF130YGR134W RAM2P29703 316 aa5.07□□□□□ -1.6
CAF130YGR134W AIM44Q99299 758 aa5.07□□□□□ -1.6
CAF130YGR134W PRI1P10363 409 aa5.05□□□□□ -1.6
CAF130YGR134W KIN1P13185 1064 aa5.05□□□□□ -1.6
CAF130YGR134W PAM1P37304 830 aaKnown RBP5.04□□□□□ -1.6
CAF130YGR134W YKR023WP36119 530 aaKnown RBP5.02□□□□□ -1.61
CAF130YGR134W GUA1P38625 525 aaKnown RBP5.02□□□□□ -1.61
CAF130YGR134W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
CAF130YGR134W YNR021WP53723 404 aaKnown RBP5.02□□□□□ -1.61
CAF130YGR134W SUB2Q07478 446 aaKnown RBP5.02□□□□□ -1.61
CAF130YGR134W YAH1Q12184 172 aaKnown RBP5.02□□□□□ -1.61
CAF130YGR134W SLX8P40072 274 aa5.01□□□□□ -1.61
CAF130YGR134W AIM7Q12156 149 aa5.01□□□□□ -1.61
CAF130YGR134W SET1P38827 1080 aaKnown RBP5.01□□□□□ -1.61
CAF130YGR134W NUP42P49686 430 aaKnown RBP5.01□□□□□ -1.61
CAF130YGR134W TOP1P04786 769 aa4.98□□□□□ -1.61
CAF130YGR134W GEF1P37020 779 aa4.98□□□□□ -1.61
CAF130YGR134W SEN54Q02825 467 aaPredicted RBP4.98□□□□□ -1.61
CAF130YGR134W REB1P21538 810 aa4.96□□□□□ -1.61
CAF130YGR134W GLN1P32288 370 aaKnown RBP4.96□□□□□ -1.62
CAF130YGR134W RSM7P47150 247 aa4.96□□□□□ -1.62
CAF130YGR134W VPS70P47161 811 aa4.96□□□□□ -1.62
CAF130YGR134W LAM6Q08001 693 aa4.96□□□□□ -1.62
CAF130YGR134W SWE1P32944 819 aa4.95□□□□□ -1.62
CAF130YGR134W FAR11P53917 953 aa4.95□□□□□ -1.62
CAF130YGR134W DOS2P54858 310 aa4.95□□□□□ -1.62
CAF130YGR134W SSA1P10591 642 aaKnown RBP4.95□□□□□ -1.62
CAF130YGR134W SPB4P25808 606 aaPredicted RBP4.95□□□□□ -1.62
CAF130YGR134W SNU71P53207 620 aaKnown RBP4.95□□□□□ -1.62
CAF130YGR134W RCR1P38212 213 aa4.94□□□□□ -1.62
CAF130YGR134W OCA5P38738 679 aa4.94□□□□□ -1.62
CAF130YGR134W DIT2P21595 489 aa4.94□□□□□ -1.62
CAF130YGR134W HPC2Q01448 625 aa4.94□□□□□ -1.62
CAF130YGR134W PBS2P08018 668 aa4.93□□□□□ -1.62
CAF130YGR134W GLC3P32775 704 aa4.93□□□□□ -1.62
CAF130YGR134W SPC42P36094 363 aa4.9□□□□□ -1.62
CAF130YGR134W PKC1P24583 1151 aa4.89□□□□□ -1.63
CAF130YGR134W YTA7P40340 1379 aa4.88□□□□□ -1.63
CAF130YGR134W TFB3Q03290 321 aa4.88□□□□□ -1.63
CAF130YGR134W RRP15Q06511 250 aaPredicted RBP4.87□□□□□ -1.63
CAF130YGR134W NOB1Q08444 459 aaKnown RBP4.87□□□□□ -1.63
CAF130YGR134W TPO2P53283 614 aa4.85□□□□□ -1.63
CAF130YGR134W RRN6P32786 894 aa4.85□□□□□ -1.63
CAF130YGR134W YIL055CP40523 627 aaKnown RBP4.85□□□□□ -1.63
CAF130YGR134W TFC8Q12308 588 aa4.85□□□□□ -1.63
CAF130YGR134W AI2P03876 854 aa4.84□□□□□ -1.63
CAF130YGR134W MAK11P20484 414 aaKnown RBP4.84□□□□□ -1.63
CAF130YGR134W SSF1P38789 453 aaPredicted RBP4.84□□□□□ -1.63
CAF130YGR134W IES2P40154 320 aa4.82□□□□□ -1.64
CAF130YGR134W ATG32P40458 529 aa4.82□□□□□ -1.64
CAF130YGR134W BIM1P40013 344 aa4.81□□□□□ -1.64
CAF130YGR134W KTR1P27810 393 aaKnown RBP4.8□□□□□ -1.64
CAF130YGR134W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
CAF130YGR134W YRB30P53107 440 aaPredicted RBP4.8□□□□□ -1.64
CAF130YGR134W MAK21Q12176 1025 aaKnown RBP4.8□□□□□ -1.64
CAF130YGR134W COX6P00427 148 aa4.79□□□□□ -1.64
CAF130YGR134W NUG1P40010 520 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms