RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC55	YGL190C	YGR130C	P53278	816 aa		4.62	□□□□□ -1.67
CDC55	YGL190C	FAR11	P53917	953 aa		4.62	□□□□□ -1.67
CDC55	YGL190C	YOR223W	Q12015	292 aa		4.62	□□□□□ -1.67
CDC55	YGL190C	CHS2	P14180	963 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	UGA4	P32837	571 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	GPT2	P36148	743 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	SEA4	P38164	1038 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	CTH1	P47976	325 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	YMR074C	Q04773	145 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	PMT7	Q06644	662 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	MSC6	Q08818	692 aa	Known RBP	4.61	□□□□□ -1.67
CDC55	YGL190C	MAC1	P35192	417 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	TOS1	P38288	455 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	SAM37	P50110	327 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	UTP22	P53254	1237 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC55	YGL190C	SEN54	Q02825	467 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC55	YGL190C	MED7	Q08278	222 aa		4.61	□□□□□ -1.67
CDC55	YGL190C	MCM5	P29496	775 aa	Known RBP	4.6	□□□□□ -1.67
CDC55	YGL190C	EXO5	P38289	585 aa		4.6	□□□□□ -1.67
CDC55	YGL190C	STM1	P39015	273 aa	Known RBP	4.6	□□□□□ -1.67
CDC55	YGL190C	MEC3	Q02574	474 aa		4.6	□□□□□ -1.67
CDC55	YGL190C	DOT1	Q04089	582 aa	Known RBP	4.6	□□□□□ -1.67
CDC55	YGL190C	GIC2	Q06648	383 aa		4.6	□□□□□ -1.67
CDC55	YGL190C	ALG6	Q12001	544 aa	Known RBP	4.6	□□□□□ -1.67
CDC55	YGL190C	RVS167	P39743	482 aa	Known RBP	4.59	□□□□□ -1.67
CDC55	YGL190C	DAK2	P43550	591 aa		4.59	□□□□□ -1.67
CDC55	YGL190C	SPO74	P45819	413 aa		4.59	□□□□□ -1.67
CDC55	YGL190C	YCS4	Q06156	1176 aa		4.59	□□□□□ -1.67
CDC55	YGL190C	CYC7	P00045	113 aa		4.58	□□□□□ -1.68
CDC55	YGL190C	CIC1	P38779	376 aa	Known RBP	4.58	□□□□□ -1.68
CDC55	YGL190C	IPL1	P38991	367 aa		4.58	□□□□□ -1.68
CDC55	YGL190C	MAG2	Q06436	670 aa	Known RBP	4.58	□□□□□ -1.68
CDC55	YGL190C	GCD1	P09032	578 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	PRP40	P33203	583 aa	Known RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	REI1	P38344	393 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	NEM1	P38757	446 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	MSB1	P21339	1137 aa	Known RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
CDC55	YGL190C	VPS35	P34110	944 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	WHI3	P34761	661 aa	Known RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	SLS1	P42900	643 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	SDH1	Q00711	640 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	NOG1	Q02892	647 aa	Known RBP	4.57	□□□□□ -1.68
CDC55	YGL190C	EAR1	Q03212	550 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	BRE4	Q07660	1125 aa		4.57	□□□□□ -1.68
CDC55	YGL190C	MSH4	P40965	878 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC55	YGL190C	YGR045C	P53229	120 aa		4.56	□□□□□ -1.68
CDC55	YGL190C	ULP1	Q02724	621 aa		4.56	□□□□□ -1.68
CDC55	YGL190C	DAL4	Q04895	635 aa		4.56	□□□□□ -1.68
CDC55	YGL190C	GCD6	P32501	712 aa	Known RBP	4.55	□□□□□ -1.68
CDC55	YGL190C	FAA3	P39002	694 aa		4.55	□□□□□ -1.68
CDC55	YGL190C	MMM1	P41800	426 aa		4.55	□□□□□ -1.68
CDC55	YGL190C	ALT1	P52893	592 aa		4.55	□□□□□ -1.68
CDC55	YGL190C	YLL054C	Q12244	843 aa		4.55	□□□□□ -1.68
CDC55	YGL190C	HEM13	P11353	328 aa	Known RBP	4.54	□□□□□ -1.68
CDC55	YGL190C	LIP5	P32875	414 aa		4.54	□□□□□ -1.68
CDC55	YGL190C	ARL1	P38116	183 aa	Known RBP	4.54	□□□□□ -1.68
CDC55	YGL190C	ELA1	P53861	379 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC55	YGL190C	MSH3	P25336	1018 aa		4.53	□□□□□ -1.68
CDC55	YGL190C	OYE3	P41816	400 aa	Predicted RBP	4.53	□□□□□ -1.68
CDC55	YGL190C	THI12	P42883	340 aa		4.53	□□□□□ -1.68
CDC55	YGL190C	THI5	P43534	340 aa		4.53	□□□□□ -1.68
CDC55	YGL190C	THI11	P47183	340 aa		4.53	□□□□□ -1.68
CDC55	YGL190C	THI13	Q07748	340 aa		4.53	□□□□□ -1.68
CDC55	YGL190C	HXK1	P04806	485 aa	Known RBP	4.53	□□□□□ -1.69
CDC55	YGL190C	RPS4A	P0CX35	261 aa	Known RBP	4.53	□□□□□ -1.69
CDC55	YGL190C	RPS4B	P0CX36	261 aa	Known RBP	4.53	□□□□□ -1.69
CDC55	YGL190C	SEC20	P28791	383 aa		4.53	□□□□□ -1.69
CDC55	YGL190C	CIT3	P43635	486 aa		4.53	□□□□□ -1.69
CDC55	YGL190C	YPL109C	Q02981	657 aa		4.53	□□□□□ -1.69
CDC55	YGL190C	UTP5	Q04177	643 aa	Known RBP	4.53	□□□□□ -1.69
CDC55	YGL190C	RPT1	P33299	467 aa	Known RBP	4.52	□□□□□ -1.69
CDC55	YGL190C	YKL077W	P36081	392 aa		4.52	□□□□□ -1.69
CDC55	YGL190C	RDH54	P38086	958 aa		4.52	□□□□□ -1.69
CDC55	YGL190C	YML020W	Q03722	664 aa		4.52	□□□□□ -1.69
CDC55	YGL190C	SMY2	P32909	740 aa	Known RBP	4.51	□□□□□ -1.69
CDC55	YGL190C	PIC2	P40035	300 aa		4.51	□□□□□ -1.69
CDC55	YGL190C	PEX13	P80667	386 aa		4.51	□□□□□ -1.69
CDC55	YGL190C	NOP8	Q08287	484 aa	Predicted RBP	4.51	□□□□□ -1.69
CDC55	YGL190C	NFS1	P25374	497 aa		4.5	□□□□□ -1.69
CDC55	YGL190C	PEX28	P38848	579 aa		4.5	□□□□□ -1.69
CDC55	YGL190C	SHU2	P38957	223 aa		4.5	□□□□□ -1.69
CDC55	YGL190C	RCM1	P53972	490 aa		4.5	□□□□□ -1.69
CDC55	YGL190C	YVC1	Q12324	675 aa		4.5	□□□□□ -1.69
CDC55	YGL190C	KAR2	P16474	682 aa	Known RBP	4.49	□□□□□ -1.69
CDC55	YGL190C	ATE1	P16639	503 aa		4.49	□□□□□ -1.69
CDC55	YGL190C	XKS1	P42826	600 aa		4.49	□□□□□ -1.69
CDC55	YGL190C	RSM26	P47141	266 aa		4.49	□□□□□ -1.69
CDC55	YGL190C	YGL140C	P53120	1219 aa		4.49	□□□□□ -1.69
CDC55	YGL190C	ADI1	Q03677	179 aa		4.49	□□□□□ -1.69
CDC55	YGL190C	RRP15	Q06511	250 aa	Predicted RBP	4.49	□□□□□ -1.69
CDC55	YGL190C	SEC23	P15303	768 aa	Known RBP	4.48	□□□□□ -1.69
CDC55	YGL190C	LRG1	P35688	1017 aa		4.48	□□□□□ -1.69
CDC55	YGL190C	PEX7	P39108	375 aa		4.48	□□□□□ -1.69
CDC55	YGL190C	YAR028W	P39548	234 aa		4.48	□□□□□ -1.69
CDC55	YGL190C	AVO1	Q08236	1176 aa		4.48	□□□□□ -1.69
CDC55	YGL190C	VMA4	P22203	233 aa	Known RBP	4.48	□□□□□ -1.69
CDC55	YGL190C	NNK1	P36003	928 aa		4.48	□□□□□ -1.69
CDC55	YGL190C	NMD3	P38861	518 aa	Known RBP	4.48	□□□□□ -1.69
CDC55	YGL190C	MTR4	P47047	1073 aa	Known RBP	4.48	□□□□□ -1.69

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