RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C CMR1Q12510 522 aaKnown RBP5.61□□□□□ -1.51
RTR1YER139C SSY1Q03770 852 aa5.6□□□□□ -1.51
RTR1YER139C ALG6Q12001 544 aaKnown RBP5.6□□□□□ -1.51
RTR1YER139C DUR3P33413 735 aa5.59□□□□□ -1.51
RTR1YER139C ORC3P54790 616 aa5.59□□□□□ -1.51
RTR1YER139C TRE1Q08919 783 aa5.59□□□□□ -1.51
RTR1YER139C MEC3Q02574 474 aa5.58□□□□□ -1.52
RTR1YER139C LPX1Q12405 387 aaKnown RBP5.58□□□□□ -1.52
RTR1YER139C PRO1P32264 428 aa5.57□□□□□ -1.52
RTR1YER139C YVC1Q12324 675 aa5.57□□□□□ -1.52
RTR1YER139C PRP6P19735 899 aaPredicted RBP5.56□□□□□ -1.52
RTR1YER139C PRP5P21372 849 aaPredicted RBP5.56□□□□□ -1.52
RTR1YER139C REI1P38344 393 aaPredicted RBP5.56□□□□□ -1.52
RTR1YER139C PEX7P39108 375 aa5.56□□□□□ -1.52
RTR1YER139C UTP22P53254 1237 aaPredicted RBP5.56□□□□□ -1.52
RTR1YER139C FLR1P38124 548 aa5.55□□□□□ -1.52
RTR1YER139C ECM2P38241 364 aaKnown RBP5.55□□□□□ -1.52
RTR1YER139C RSC4Q02206 625 aa5.55□□□□□ -1.52
RTR1YER139C NFS1P25374 497 aa5.54□□□□□ -1.52
RTR1YER139C AIM3P38266 947 aaKnown RBP5.54□□□□□ -1.52
RTR1YER139C UFD2P54860 961 aa5.54□□□□□ -1.52
RTR1YER139C MSH6Q03834 1242 aa5.54□□□□□ -1.52
RTR1YER139C SMY2P32909 740 aaKnown RBP5.53□□□□□ -1.52
RTR1YER139C PTC7P38797 343 aa5.53□□□□□ -1.52
RTR1YER139C ELA1P53861 379 aaPredicted RBP5.53□□□□□ -1.52
RTR1YER139C GLO3P38682 493 aaKnown RBP5.52□□□□□ -1.53
RTR1YER139C YDL177CQ12257 170 aa5.52□□□□□ -1.53
RTR1YER139C YGR045CP53229 120 aa5.51□□□□□ -1.53
RTR1YER139C HDA2Q06629 674 aa5.51□□□□□ -1.53
RTR1YER139C TY1A-LR4P0C2I8 440 aaKnown RBP5.5□□□□□ -1.53
RTR1YER139C TY1A-DR6P0CX70 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-ER1P0CX71 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-LR2P0CX72 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-PLP0CX73 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-JR1P0CX74 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-LR3P0CX75 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-ML2P0CX76 440 aa5.5□□□□□ -1.53
RTR1YER139C MRPL22P53881 309 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-GR1Q12085 440 aa5.5□□□□□ -1.53
RTR1YER139C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.5□□□□□ -1.53
RTR1YER139C TY1A-OLQ92392 440 aaKnown RBP5.5□□□□□ -1.53
RTR1YER139C QDR1P40475 563 aa5.49□□□□□ -1.53
RTR1YER139C GTS1P40956 396 aa5.49□□□□□ -1.53
RTR1YER139C SAP155P43612 1002 aa5.49□□□□□ -1.53
RTR1YER139C NNK1P36003 928 aa5.48□□□□□ -1.53
RTR1YER139C BSC2Q05611 235 aa5.48□□□□□ -1.53
RTR1YER139C AVO1Q08236 1176 aa5.48□□□□□ -1.53
RTR1YER139C ETP1P38748 585 aaKnown RBP5.47□□□□□ -1.53
RTR1YER139C RIM8P53179 542 aa5.47□□□□□ -1.53
RTR1YER139C YAF9P53930 226 aa5.47□□□□□ -1.53
RTR1YER139C KAR5Q04746 504 aa5.47□□□□□ -1.53
RTR1YER139C FLP1P03870 423 aa5.46□□□□□ -1.54
RTR1YER139C PUS7Q08647 676 aaKnown RBP5.46□□□□□ -1.54
RTR1YER139C ARL1P38116 183 aaKnown RBP5.45□□□□□ -1.54
RTR1YER139C NUT1P53114 1132 aa5.45□□□□□ -1.54
RTR1YER139C YNL011CP53980 444 aa5.45□□□□□ -1.54
RTR1YER139C TPP1Q03796 238 aa5.45□□□□□ -1.54
RTR1YER139C PMT7Q06644 662 aa5.45□□□□□ -1.54
RTR1YER139C MCM5P29496 775 aaKnown RBP5.43□□□□□ -1.54
RTR1YER139C TOD6P34219 525 aa5.43□□□□□ -1.54
RTR1YER139C ATG1P53104 897 aa5.43□□□□□ -1.54
RTR1YER139C TRS120Q04183 1289 aa5.43□□□□□ -1.54
RTR1YER139C SUB2Q07478 446 aaKnown RBP5.43□□□□□ -1.54
RTR1YER139C MNL2Q12205 849 aa5.43□□□□□ -1.54
RTR1YER139C SOD2P00447 233 aa5.42□□□□□ -1.54
RTR1YER139C CDC55Q00362 526 aa5.42□□□□□ -1.54
RTR1YER139C GIS1Q03833 894 aa5.42□□□□□ -1.54
RTR1YER139C EXO5P38289 585 aa5.41□□□□□ -1.54
RTR1YER139C NMD3P38861 518 aaKnown RBP5.41□□□□□ -1.54
RTR1YER139C SLS1P42900 643 aa5.41□□□□□ -1.54
RTR1YER139C MON1P53129 644 aa5.41□□□□□ -1.54
RTR1YER139C YPL277CQ08989 487 aa5.41□□□□□ -1.54
RTR1YER139C SAM35P14693 329 aa5.4□□□□□ -1.54
RTR1YER139C INP54Q08227 384 aaKnown RBP5.4□□□□□ -1.54
RTR1YER139C RPS13P05756 151 aaKnown RBP5.39□□□□□ -1.55
RTR1YER139C YHL012WP38709 493 aa5.39□□□□□ -1.55
RTR1YER139C NEM1P38757 446 aa5.39□□□□□ -1.55
RTR1YER139C ACF4P47129 309 aa5.39□□□□□ -1.55
RTR1YER139C YLR257WQ06146 321 aaKnown RBP5.39□□□□□ -1.55
RTR1YER139C YKL077WP36081 392 aa5.38□□□□□ -1.55
RTR1YER139C YAR028WP39548 234 aa5.38□□□□□ -1.55
RTR1YER139C SNO2P53823 222 aa5.38□□□□□ -1.55
RTR1YER139C FOL2P51601 243 aaKnown RBP5.37□□□□□ -1.55
RTR1YER139C CLU1Q03690 1277 aaKnown RBP5.37□□□□□ -1.55
RTR1YER139C RVS167P39743 482 aaKnown RBP5.36□□□□□ -1.55
RTR1YER139C GSF2Q04697 403 aaKnown RBP5.36□□□□□ -1.55
RTR1YER139C RET1P22276 1149 aaKnown RBP5.35□□□□□ -1.55
RTR1YER139C MDL2P33311 773 aa5.35□□□□□ -1.55
RTR1YER139C RPL34AP87262 121 aaPredicted RBP5.35□□□□□ -1.55
RTR1YER139C CTS1P29029 562 aa5.34□□□□□ -1.55
RTR1YER139C AIM26P32858 118 aa5.34□□□□□ -1.55
RTR1YER139C ABZ1P37254 787 aaPredicted RBP5.34□□□□□ -1.55
RTR1YER139C SHU2P38957 223 aa5.34□□□□□ -1.55
RTR1YER139C RSA3Q05942 220 aaKnown RBP5.34□□□□□ -1.55
RTR1YER139C SHM2P37291 469 aaKnown RBP5.33□□□□□ -1.56
RTR1YER139C MTR4P47047 1073 aaKnown RBP5.33□□□□□ -1.56
RTR1YER139C UTP5Q04177 643 aaKnown RBP5.33□□□□□ -1.56
RTR1YER139C HRK1Q08732 759 aaKnown RBP5.33□□□□□ -1.56
RTR1YER139C NOC3Q07896 663 aaPredicted RBP5.32□□□□□ -1.56
RTR1YER139C TRL1P09880 827 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms