RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C YBL113CQ7M4S9 792 aa5.99□□□□□ -1.45
SPR28YDR218C CYC7P00045 113 aa5.98□□□□□ -1.45
SPR28YDR218C FET4P40988 552 aa5.98□□□□□ -1.45
SPR28YDR218C AVT1P47082 602 aa5.98□□□□□ -1.45
SPR28YDR218C RNH70P53331 553 aa5.98□□□□□ -1.45
SPR28YDR218C GIN4Q12263 1142 aa5.98□□□□□ -1.45
SPR28YDR218C YOL098CQ12496 1037 aa5.98□□□□□ -1.45
SPR28YDR218C DUR3P33413 735 aa5.97□□□□□ -1.45
SPR28YDR218C GLO3P38682 493 aaKnown RBP5.97□□□□□ -1.45
SPR28YDR218C MSC6Q08818 692 aaKnown RBP5.97□□□□□ -1.45
SPR28YDR218C QDR1P40475 563 aa5.96□□□□□ -1.46
SPR28YDR218C JIP5Q06214 492 aaPredicted RBP5.96□□□□□ -1.46
SPR28YDR218C TSR4P25040 408 aa5.95□□□□□ -1.46
SPR28YDR218C IRC24P40580 263 aa5.95□□□□□ -1.46
SPR28YDR218C THI12P42883 340 aa5.95□□□□□ -1.46
SPR28YDR218C THI5P43534 340 aa5.95□□□□□ -1.46
SPR28YDR218C THI11P47183 340 aa5.95□□□□□ -1.46
SPR28YDR218C SDH1Q00711 640 aa5.95□□□□□ -1.46
SPR28YDR218C KAR5Q04746 504 aa5.95□□□□□ -1.46
SPR28YDR218C UBX5Q06682 500 aa5.95□□□□□ -1.46
SPR28YDR218C THI13Q07748 340 aa5.95□□□□□ -1.46
SPR28YDR218C RSC4Q02206 625 aa5.94□□□□□ -1.46
SPR28YDR218C CMR1Q12510 522 aaKnown RBP5.94□□□□□ -1.46
SPR28YDR218C GCD1P09032 578 aaPredicted RBP5.93□□□□□ -1.46
SPR28YDR218C MSB1P21339 1137 aaKnown RBP5.93□□□□□ -1.46
SPR28YDR218C SRP40P32583 406 aaPredicted RBP5.93□□□□□ -1.46
SPR28YDR218C MGE1P38523 228 aa5.93□□□□□ -1.46
SPR28YDR218C RIM11P38615 370 aa5.93□□□□□ -1.46
SPR28YDR218C GIC2Q06648 383 aa5.93□□□□□ -1.46
SPR28YDR218C BUD21Q08492 214 aaPredicted RBP5.93□□□□□ -1.46
SPR28YDR218C ERP5P38819 212 aa5.92□□□□□ -1.46
SPR28YDR218C ATG1P53104 897 aa5.92□□□□□ -1.46
SPR28YDR218C OYE2Q03558 400 aaKnown RBP5.92□□□□□ -1.46
SPR28YDR218C MNL2Q12205 849 aa5.92□□□□□ -1.46
SPR28YDR218C NPR1P22211 790 aa5.91□□□□□ -1.46
SPR28YDR218C MNN4P36044 1178 aa5.91□□□□□ -1.46
SPR28YDR218C YHL050CP38721 697 aa5.91□□□□□ -1.46
SPR28YDR218C YHR219WP38900 624 aa5.91□□□□□ -1.46
SPR28YDR218C NOP2P40991 618 aaKnown RBP5.91□□□□□ -1.46
SPR28YDR218C UFD2P54860 961 aa5.91□□□□□ -1.46
SPR28YDR218C YOR223WQ12015 292 aa5.91□□□□□ -1.46
SPR28YDR218C GPT2P36148 743 aa5.9□□□□□ -1.46
SPR28YDR218C MDG1P53885 366 aa5.9□□□□□ -1.46
SPR28YDR218C POB3Q04636 552 aaKnown RBP5.9□□□□□ -1.46
SPR28YDR218C RRP15Q06511 250 aaPredicted RBP5.9□□□□□ -1.46
SPR28YDR218C SSB1P11484 613 aaKnown RBP5.89□□□□□ -1.47
SPR28YDR218C PRP5P21372 849 aaPredicted RBP5.89□□□□□ -1.47
SPR28YDR218C ELM1P32801 640 aa5.89□□□□□ -1.47
SPR28YDR218C YKL091CP33324 310 aaKnown RBP5.89□□□□□ -1.47
SPR28YDR218C WHI3P34761 661 aaKnown RBP5.89□□□□□ -1.47
SPR28YDR218C GRS1P38088 690 aaKnown RBP5.89□□□□□ -1.47
SPR28YDR218C PPX1P38698 397 aa5.89□□□□□ -1.47
SPR28YDR218C SSB2P40150 613 aaKnown RBP5.89□□□□□ -1.47
SPR28YDR218C YMR074CQ04773 145 aa5.89□□□□□ -1.47
SPR28YDR218C YIG1Q08956 461 aa5.89□□□□□ -1.47
SPR28YDR218C HTS1P07263 546 aaKnown RBP5.88□□□□□ -1.47
SPR28YDR218C ATE1P16639 503 aa5.88□□□□□ -1.47
SPR28YDR218C SEC8P32855 1065 aa5.88□□□□□ -1.47
SPR28YDR218C TPO2P53283 614 aa5.88□□□□□ -1.47
SPR28YDR218C MSH6Q03834 1242 aa5.88□□□□□ -1.47
SPR28YDR218C TRS120Q04183 1289 aa5.88□□□□□ -1.47
SPR28YDR218C AOS1Q06624 347 aa5.88□□□□□ -1.47
SPR28YDR218C TRL1P09880 827 aaKnown RBP5.87□□□□□ -1.47
SPR28YDR218C LRG1P35688 1017 aa5.87□□□□□ -1.47
SPR28YDR218C GCV1P48015 400 aa5.87□□□□□ -1.47
SPR28YDR218C DOT1Q04089 582 aaKnown RBP5.87□□□□□ -1.47
SPR28YDR218C ACF4P47129 309 aa5.86□□□□□ -1.47
SPR28YDR218C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SPR28YDR218C VAC8P39968 578 aa5.85□□□□□ -1.47
SPR28YDR218C TPM2P40414 161 aa5.85□□□□□ -1.47
SPR28YDR218C MAD1P40957 749 aa5.85□□□□□ -1.47
SPR28YDR218C MMM1P41800 426 aa5.85□□□□□ -1.47
SPR28YDR218C ALG12P53730 551 aa5.85□□□□□ -1.47
SPR28YDR218C FLP1P03870 423 aa5.84□□□□□ -1.47
SPR28YDR218C RNQ1P25367 405 aa5.84□□□□□ -1.47
SPR28YDR218C SEG2P34250 1132 aa5.84□□□□□ -1.47
SPR28YDR218C SAP155P43612 1002 aa5.84□□□□□ -1.47
SPR28YDR218C YJL049WP47048 450 aa5.84□□□□□ -1.47
SPR28YDR218C YGL081WP53156 320 aa5.84□□□□□ -1.47
SPR28YDR218C YNL011CP53980 444 aa5.84□□□□□ -1.47
SPR28YDR218C BSC2Q05611 235 aa5.84□□□□□ -1.47
SPR28YDR218C GPI13Q07830 1017 aa5.84□□□□□ -1.47
SPR28YDR218C ALG6Q12001 544 aaKnown RBP5.84□□□□□ -1.47
SPR28YDR218C YOR131CQ12486 218 aa5.84□□□□□ -1.47
SPR28YDR218C YGR161W-CQ3E744 92 aa5.84□□□□□ -1.47
SPR28YDR218C TY1A-LR4P0C2I8 440 aaKnown RBP5.83□□□□□ -1.48
SPR28YDR218C TY1A-DR6P0CX70 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-ER1P0CX71 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-LR2P0CX72 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-PLP0CX73 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-JR1P0CX74 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-LR3P0CX75 440 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-ML2P0CX76 440 aa5.83□□□□□ -1.48
SPR28YDR218C MDJ2P42834 146 aa5.83□□□□□ -1.48
SPR28YDR218C CIT3P43635 486 aa5.83□□□□□ -1.48
SPR28YDR218C ZDS1P50111 915 aaKnown RBP5.83□□□□□ -1.48
SPR28YDR218C CDC55Q00362 526 aa5.83□□□□□ -1.48
SPR28YDR218C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SPR28YDR218C EAR1Q03212 550 aa5.83□□□□□ -1.48
SPR28YDR218C TY1A-GR1Q12085 440 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms