RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	NPL4	P33755	580 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	LDH1	P38139	375 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	FPR3	P38911	411 aa	Known RBP	7.63	□□□□□ -1.19
CDC1	YDR182W	ENP2	P48234	707 aa	Known RBP	7.63	□□□□□ -1.19
CDC1	YDR182W	MRPS35	P53292	345 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	WSC3	Q12215	556 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	YOR131C	Q12486	218 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	TAO3	P40468	2376 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	CHO2	P05374	869 aa	Known RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	VMA2	P16140	517 aa	Known RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	COQ1	P18900	473 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	SAM2	P19358	384 aa	Known RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	PER1	P25625	357 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	MRD1	Q06106	887 aa	Known RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	SAM3	Q08986	587 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	YBL029C-A	Q3E756	94 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	LAM4	P38800	1345 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	ACE2	P21192	770 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	RTS1	P38903	757 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	SLN1	P39928	1220 aa	Predicted RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	PKH3	Q03306	898 aa	Predicted RBP	7.62	□□□□□ -1.19
CDC1	YDR182W	DUS4	Q06063	367 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	SKG3	Q06315	1026 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	TAH18	Q12181	623 aa		7.62	□□□□□ -1.19
CDC1	YDR182W	PKC1	P24583	1151 aa		7.61	□□□□□ -1.19
CDC1	YDR182W	PTC3	P34221	468 aa	Known RBP	7.61	□□□□□ -1.19
CDC1	YDR182W	RFC1	P38630	861 aa	Known RBP	7.61	□□□□□ -1.19
CDC1	YDR182W	RRP8	P38961	392 aa	Known RBP	7.61	□□□□□ -1.19
CDC1	YDR182W	ICL2	Q12031	575 aa		7.61	□□□□□ -1.19
CDC1	YDR182W	RAD61	Q99359	647 aa		7.61	□□□□□ -1.19
CDC1	YDR182W	ECM29	P38737	1868 aa		7.61	□□□□□ -1.19
CDC1	YDR182W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
CDC1	YDR182W	DIT2	P21595	489 aa		7.6	□□□□□ -1.19
CDC1	YDR182W	PRO3	P32263	286 aa	Known RBP	7.6	□□□□□ -1.19
CDC1	YDR182W	AFG3	P39925	761 aa		7.6	□□□□□ -1.19
CDC1	YDR182W	BRE1	Q07457	700 aa	Known RBP	7.6	□□□□□ -1.19
CDC1	YDR182W	SUT2	Q12286	268 aa		7.6	□□□□□ -1.19
CDC1	YDR182W	MAM3	Q12296	706 aa		7.6	□□□□□ -1.19
CDC1	YDR182W	KTR1	P27810	393 aa	Known RBP	7.59	□□□□□ -1.19
CDC1	YDR182W	OSH3	P38713	996 aa	Known RBP	7.59	□□□□□ -1.19
CDC1	YDR182W	VPS8	P39702	1274 aa		7.59	□□□□□ -1.19
CDC1	YDR182W	CLA4	P48562	842 aa		7.59	□□□□□ -1.19
CDC1	YDR182W	BUL2	Q03758	920 aa	Known RBP	7.59	□□□□□ -1.19
CDC1	YDR182W	MET7	Q08645	548 aa		7.59	□□□□□ -1.19
CDC1	YDR182W	SAM1	P10659	382 aa	Known RBP	7.58	□□□□□ -1.2
CDC1	YDR182W	UTR4	P32626	227 aa		7.58	□□□□□ -1.2
CDC1	YDR182W	UIP5	P36137	443 aa		7.58	□□□□□ -1.2
CDC1	YDR182W	STM1	P39015	273 aa	Known RBP	7.58	□□□□□ -1.2
CDC1	YDR182W	VNX1	P42839	908 aa		7.58	□□□□□ -1.2
CDC1	YDR182W	YOL036W	Q08206	761 aa		7.58	□□□□□ -1.2
CDC1	YDR182W	CDC16	P09798	840 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	RAD18	P10862	487 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	SRP40	P32583	406 aa	Predicted RBP	7.57	□□□□□ -1.2
CDC1	YDR182W	BCS1	P32839	456 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	GPB2	P39717	880 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	MXR1	P40029	184 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	YJR107W	P47145	328 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	UFD2	P54860	961 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	YDR461C-A	Q2V2P7	80 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	YPR117W	Q06116	2489 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	TUS1	Q06412	1307 aa		7.57	□□□□□ -1.2
CDC1	YDR182W	SHP1	P34223	423 aa		7.56	□□□□□ -1.2
CDC1	YDR182W	FIR1	P40020	876 aa		7.56	□□□□□ -1.2
CDC1	YDR182W	SOL4	P53315	255 aa		7.56	□□□□□ -1.2
CDC1	YDR182W	ALD6	P54115	500 aa	Known RBP	7.56	□□□□□ -1.2
CDC1	YDR182W	RPS15	Q01855	142 aa	Known RBP	7.56	□□□□□ -1.2
CDC1	YDR182W	YVH1	Q02256	364 aa	Known RBP	7.56	□□□□□ -1.2
CDC1	YDR182W	NKP2	Q06162	153 aa		7.56	□□□□□ -1.2
CDC1	YDR182W	MDM20	Q12387	796 aa	Known RBP	7.56	□□□□□ -1.2
CDC1	YDR182W	RIT1	P23796	513 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	RGT1	P32862	1170 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	KTR2	P33550	425 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	MET1	P36150	593 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	PHO88	P38264	188 aa	Predicted RBP	7.55	□□□□□ -1.2
CDC1	YDR182W	ECM30	Q06673	1274 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	OPI1	P21957	404 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	HDA1	P53973	706 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	YPL034W	Q03083	165 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	TMA64	Q04600	565 aa	Known RBP	7.55	□□□□□ -1.2
CDC1	YDR182W	SUE1	Q06524	206 aa		7.55	□□□□□ -1.2
CDC1	YDR182W	CDC19	P00549	500 aa	Known RBP	7.54	□□□□□ -1.2
CDC1	YDR182W	YKR018C	P36114	725 aa		7.54	□□□□□ -1.2
CDC1	YDR182W	YGR125W	P53273	1036 aa		7.54	□□□□□ -1.2
CDC1	YDR182W	YAF9	P53930	226 aa		7.54	□□□□□ -1.2
CDC1	YDR182W	VPS30	Q02948	557 aa		7.54	□□□□□ -1.2
CDC1	YDR182W	SLD5	Q03406	294 aa		7.54	□□□□□ -1.2
CDC1	YDR182W	ANP1	P32629	500 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	TGL1	P34163	548 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	MYO3	P36006	1272 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	KSP1	P38691	1029 aa	Known RBP	7.53	□□□□□ -1.2
CDC1	YDR182W	TOM71	P38825	639 aa	Known RBP	7.53	□□□□□ -1.2
CDC1	YDR182W	AIM21	P40563	679 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	PTK2	P47116	818 aa	Known RBP	7.53	□□□□□ -1.2
CDC1	YDR182W	ATH1	P48016	1211 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	SCS3	P53012	380 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	YGL039W	P53183	348 aa	Known RBP	7.53	□□□□□ -1.2
CDC1	YDR182W	FOL1	P53848	824 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	DUS3	Q06053	668 aa	Known RBP	7.53	□□□□□ -1.2
CDC1	YDR182W	YPR148C	Q06523	435 aa		7.53	□□□□□ -1.2
CDC1	YDR182W	RIM20	Q12033	661 aa		7.53	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms