RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W MON2P48563 1636 aaPredicted RBP13.46□□□□□ -0.26
CDC1YDR182W INO80P53115 1489 aa13.42□□□□□ -0.26
CDC1YDR182W SWR1Q05471 1514 aa12.85□□□□□ -0.35
CDC1YDR182W DNA2P38859 1522 aa12.82□□□□□ -0.36
CDC1YDR182W TY1B-DR4Q07793 1604 aa12.76□□□□□ -0.37
CDC1YDR182W TCB3Q03640 1545 aaKnown RBP12.76□□□□□ -0.37
CDC1YDR182W SGS1P35187 1447 aa12.63□□□□□ -0.39
CDC1YDR182W KOG1P38873 1557 aa12.62□□□□□ -0.39
CDC1YDR182W MTC1P47018 478 aaKnown RBP12.4□□□□□ -0.42
CDC1YDR182W HSL1P34244 1518 aa12.35□□□□□ -0.43
CDC1YDR182W SPT6P23615 1451 aaKnown RBP12.32□□□□□ -0.44
CDC1YDR182W RSE1Q04693 1361 aaKnown RBP12.29□□□□□ -0.44
CDC1YDR182W DRS1P32892 752 aaKnown RBP12.26□□□□□ -0.45
CDC1YDR182W SPA2P23201 1466 aaKnown RBP12.21□□□□□ -0.45
CDC1YDR182W HIR3P47171 1648 aa12.09□□□□□ -0.47
CDC1YDR182W ECM5Q03214 1411 aa12.02□□□□□ -0.49
CDC1YDR182W FAP1P53971 965 aa11.94□□□□□ -0.5
CDC1YDR182W THO2P53552 1597 aaKnown RBP11.93□□□□□ -0.5
CDC1YDR182W BUD4P47136 1447 aa11.93□□□□□ -0.5
CDC1YDR182W XRN1P22147 1528 aaKnown RBP11.87□□□□□ -0.51
CDC1YDR182W MDS3P53094 1487 aa11.84□□□□□ -0.51
CDC1YDR182W PEP1P32319 1579 aa11.71□□□□□ -0.54
CDC1YDR182W SSN2P38931 1420 aa11.68□□□□□ -0.54
CDC1YDR182W ATG2P53855 1592 aa11.67□□□□□ -0.54
CDC1YDR182W REV3P14284 1504 aa11.66□□□□□ -0.54
CDC1YDR182W TAF2P23255 1407 aa11.55□□□□□ -0.56
CDC1YDR182W BPT1P14772 1559 aa11.51□□□□□ -0.57
CDC1YDR182W SKI3P17883 1432 aaKnown RBP11.49□□□□□ -0.57
CDC1YDR182W SIN3P22579 1536 aa11.49□□□□□ -0.57
CDC1YDR182W SSK2P53599 1579 aa11.42□□□□□ -0.58
CDC1YDR182W ESP1Q03018 1630 aa11.37□□□□□ -0.59
CDC1YDR182W PRY3P47033 881 aa11.35□□□□□ -0.59
CDC1YDR182W YCF1P39109 1515 aaKnown RBP11.32□□□□□ -0.6
CDC1YDR182W UFD4P33202 1483 aa11.27□□□□□ -0.61
CDC1YDR182W SCC2Q04002 1493 aa11.21□□□□□ -0.62
CDC1YDR182W MYO2P19524 1574 aaKnown RBP11.2□□□□□ -0.62
CDC1YDR182W YPK9Q12697 1472 aa11.19□□□□□ -0.62
CDC1YDR182W RPO31P04051 1460 aa11.11□□□□□ -0.63
CDC1YDR182W TY2B-LR1P0C2J3 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-FP0CX63 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-GR2P0CX64 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-CP25384 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-DR2Q03494 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY1B-DR1Q03855 1755 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-DR3Q07791 1770 aaKnown RBP11.1□□□□□ -0.63
CDC1YDR182W TY2B-OR1Q12113 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-DR1Q12472 1770 aa11.1□□□□□ -0.63
CDC1YDR182W TY2B-OR2Q12501 1770 aa11.1□□□□□ -0.63
CDC1YDR182W CDC25P04821 1589 aa11.08□□□□□ -0.64
CDC1YDR182W ESC1Q03661 1658 aaKnown RBP11.07□□□□□ -0.64
CDC1YDR182W CHD1P32657 1468 aa11.06□□□□□ -0.64
CDC1YDR182W DNF1P32660 1571 aa11.04□□□□□ -0.64
CDC1YDR182W TY1B-BRQ12193 1756 aa11.04□□□□□ -0.64
CDC1YDR182W TY1B-GR3Q12316 1755 aa11.04□□□□□ -0.64
CDC1YDR182W TY1B-ORQ92393 1755 aa11.04□□□□□ -0.64
CDC1YDR182W RQC2Q12532 1038 aaKnown RBP11.04□□□□□ -0.64
CDC1YDR182W TY2B-BQ12491 1770 aa10.97□□□□□ -0.65
CDC1YDR182W PAN1P32521 1480 aa10.95□□□□□ -0.66
CDC1YDR182W TY1B-DR3Q99231 1755 aa10.94□□□□□ -0.66
CDC1YDR182W TY1B-HO13535 1793 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-DR5P0C2I2 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-DR6P0C2I3 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-LR2P0C2I5 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-LR3P0C2I6 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TY1B-PR1P0C2I9 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TY1B-PR2P0C2J0 1756 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-PR3P0C2J1 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TY1B-JR1P47098 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-ML2Q03434 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TY1B-ER1Q03612 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-ML1Q04711 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TY1B-GR2Q12269 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-OLQ12273 1755 aa10.93□□□□□ -0.66
CDC1YDR182W TY1B-PLQ12414 1755 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W TOP2P06786 1428 aaKnown RBP10.93□□□□□ -0.66
CDC1YDR182W MET5P47169 1442 aa10.93□□□□□ -0.66
CDC1YDR182W RKR1Q04781 1562 aa10.92□□□□□ -0.66
CDC1YDR182W RPA190P10964 1664 aaKnown RBP10.92□□□□□ -0.66
CDC1YDR182W MMS22Q06164 1454 aa10.86□□□□□ -0.67
CDC1YDR182W POL1P13382 1468 aa10.85□□□□□ -0.67
CDC1YDR182W LTE1P07866 1435 aa10.82□□□□□ -0.68
CDC1YDR182W STU1P38198 1513 aa10.8□□□□□ -0.68
CDC1YDR182W TRM732Q03496 1420 aa10.78□□□□□ -0.68
CDC1YDR182W YOR1P53049 1477 aa10.77□□□□□ -0.68
CDC1YDR182W BNI1P41832 1953 aa10.76□□□□□ -0.69
CDC1YDR182W SMC4Q12267 1418 aa10.75□□□□□ -0.69
CDC1YDR182W SPP41P38904 1435 aa10.73□□□□□ -0.69
CDC1YDR182W YRF1-1P0CX20 1796 aa10.72□□□□□ -0.69
CDC1YDR182W YRF1-5P0CX21 1796 aa10.72□□□□□ -0.69
CDC1YDR182W YRF1-8P0CX22 1796 aa10.72□□□□□ -0.69
CDC1YDR182W GEA2P39993 1459 aaKnown RBP10.72□□□□□ -0.69
CDC1YDR182W TY1B-JR2P47100 1755 aaKnown RBP10.71□□□□□ -0.69
CDC1YDR182W TY1B-ER2Q03619 1755 aa10.71□□□□□ -0.69
CDC1YDR182W TY1B-MR1Q04214 1755 aa10.71□□□□□ -0.69
CDC1YDR182W TY1B-MR2Q04670 1755 aaKnown RBP10.71□□□□□ -0.69
CDC1YDR182W TY1B-LR1Q12088 1755 aaKnown RBP10.71□□□□□ -0.69
CDC1YDR182W TY1B-NL1Q12112 1755 aa10.71□□□□□ -0.69
CDC1YDR182W TY1B-GR1Q12141 1755 aa10.71□□□□□ -0.69
CDC1YDR182W TY1B-BLQ12490 1755 aa10.71□□□□□ -0.69
CDC1YDR182W NTE1Q04958 1679 aa10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms