RNA–Protein interactions for RNA: YDR150W

NUM1, Transcript of Protein required for nuclear migration, yeast

Gene NUM1, Length 8,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUM1	YDR150W	SQS1	P53866	767 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	CWC21	Q03375	135 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	CDC48	P25694	835 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	BUD2	P33314	1104 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	FYV10	P40492	516 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	YDR341C	Q05506	607 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	INP54	Q08227	384 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	APM4	Q99186	491 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	KTR1	P27810	393 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	RPN2	P32565	945 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	FRD1	P32614	470 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	NPL4	P33755	580 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	PFF1	P38244	976 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	UBP12	P39538	1254 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	SPC72	P39723	622 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	BOI2	P39969	1040 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	BRO1	P48582	844 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	ADE16	P54113	591 aa	Known RBP	2.81	□□□□□ -1.96
NUM1	YDR150W	RUP1	Q12242	671 aa		2.81	□□□□□ -1.96
NUM1	YDR150W	RPS19A	P07280	144 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	RPS19B	P07281	144 aa	Predicted RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	RPB2	P08518	1224 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	GRR1	P24814	1151 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	CIC1	P38779	376 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	GSM1	P42950	618 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	TAH18	Q12181	623 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	KAR1	P11927	433 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	PEP3	P27801	918 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	RPL8B	P29453	256 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	MRF1	P30775	413 aa	Predicted RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	APL2	P36000	726 aa	Predicted RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	YGL242C	P53066	181 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	ATG1	P53104	897 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	TIM50	Q02776	476 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	SSK22	P25390	1331 aa	Predicted RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	TIM54	P47045	478 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	VMS1	Q04311	632 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	LCD1	Q04377	747 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	YLR257W	Q06146	321 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	UTP4	Q06679	776 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	OPI1	P21957	404 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	YBL028C	P38202	106 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	NPR3	P38742	1146 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	CYB2	P00175	591 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	MPH3	P0CE00	602 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	VMA4	P22203	233 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	UBC6	P33296	250 aa	Predicted RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	NIP100	P33420	868 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	MDM1	Q01846	1127 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	GFD1	Q04839	188 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	TY1B-A	O13527	1196 aa	Known RBP	2.8	□□□□□ -1.96
NUM1	YDR150W	MSH3	P25336	1018 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	RPC53	P25441	422 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	RAD24	P32641	659 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	PEX5	P35056	612 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	OCA5	P38738	679 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	PUS6	P53294	404 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	SEC39	Q12745	709 aa		2.8	□□□□□ -1.96
NUM1	YDR150W	ERG12	P07277	443 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	CDC11	P32458	415 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	TSR2	Q06672	205 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	YLL058W	Q12198	575 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	LSP1	Q12230	341 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	GYP5	Q12344	894 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	GCN2	P15442	1659 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	HIS4	P00815	799 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	DIT2	P21595	489 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	SRB4	P32569	687 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	RPN3	P40016	523 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	CWH41	P53008	833 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	SHE10	P53075	577 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	MCM1	P11746	286 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	SEC6	P32844	805 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	NFU1	P32860	256 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	GPT2	P36148	743 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	CST26	P38226	397 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	RTS1	P38903	757 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	STU2	P46675	888 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	ALT2	P52892	507 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	DBP3	P20447	523 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	RRP1	P35178	278 aa	Predicted RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	ETP1	P38748	585 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	HST1	P53685	503 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	VTA1	Q06263	330 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	SUB2	Q07478	446 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	THR4	P16120	514 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	BRL1	P38770	471 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	TRM44	Q02648	567 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	SCM3	Q12334	223 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	PMA1	P05030	918 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	PRX1	P34227	261 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	NOP4	P37838	685 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	TCD1	P38756	429 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	YLR287C	Q05881	355 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	IRC20	Q06554	1556 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	CDC37	P06101	506 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	DCD1	P06773	312 aa		2.79	□□□□□ -1.96
NUM1	YDR150W	TOM70	P07213	617 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	SSA4	P22202	642 aa	Known RBP	2.79	□□□□□ -1.96
NUM1	YDR150W	RPT2	P40327	437 aa	Known RBP	2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms