RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN2	YDL204W	NAF1	P53919	492 aa	Known RBP	11.33	□□□□□ -0.6
RTN2	YDL204W	HDA1	P53973	706 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
RTN2	YDL204W	CEX1	Q12453	761 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	YOR111W	Q99210	232 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	RAD61	Q99359	647 aa		11.33	□□□□□ -0.6
RTN2	YDL204W	CDC6	P09119	513 aa		11.32	□□□□□ -0.6
RTN2	YDL204W	URA1	P28272	314 aa	Predicted RBP	11.32	□□□□□ -0.6
RTN2	YDL204W	SMY1	P32364	656 aa	Known RBP	11.32	□□□□□ -0.6
RTN2	YDL204W	CSM2	P40465	213 aa		11.32	□□□□□ -0.6
RTN2	YDL204W	APL6	P46682	809 aa		11.32	□□□□□ -0.6
RTN2	YDL204W	PTK2	P47116	818 aa	Known RBP	11.32	□□□□□ -0.6
RTN2	YDL204W	WAR1	Q03631	944 aa		11.32	□□□□□ -0.6
RTN2	YDL204W	WRS1	Q12109	432 aa	Known RBP	11.32	□□□□□ -0.6
RTN2	YDL204W	SNF3	P10870	884 aa		11.31	□□□□□ -0.6
RTN2	YDL204W	SPC110	P32380	944 aa		11.31	□□□□□ -0.6
RTN2	YDL204W	SAC6	P32599	642 aa	Known RBP	11.31	□□□□□ -0.6
RTN2	YDL204W	UGA2	P38067	497 aa		11.31	□□□□□ -0.6
RTN2	YDL204W	TIF4632	P39936	914 aa	Known RBP	11.31	□□□□□ -0.6
RTN2	YDL204W	VID27	P40157	782 aa		11.31	□□□□□ -0.6
RTN2	YDL204W	CUE3	P53137	624 aa	Known RBP	11.31	□□□□□ -0.6
RTN2	YDL204W	HCR1	Q05775	265 aa	Known RBP	11.31	□□□□□ -0.6
RTN2	YDL204W	GRX6	Q12438	231 aa		11.31	□□□□□ -0.6
RTN2	YDL204W	HOS3	Q02959	697 aa	Known RBP	11.3	□□□□□ -0.6
RTN2	YDL204W	YDR341C	Q05506	607 aa	Known RBP	11.3	□□□□□ -0.6
RTN2	YDL204W	CIT1	P00890	479 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	MNR2	P35724	969 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	VPS8	P39702	1274 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	PCI8	P40512	444 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	RTC4	P53850	401 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	MYO5	Q04439	1219 aa	Known RBP	11.29	□□□□□ -0.6
RTN2	YDL204W	GFD1	Q04839	188 aa	Known RBP	11.29	□□□□□ -0.6
RTN2	YDL204W	TOS4	Q06266	489 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	TIP41	Q12199	356 aa		11.29	□□□□□ -0.6
RTN2	YDL204W	ARG82	P07250	355 aa		11.28	□□□□□ -0.6
RTN2	YDL204W	VPS1	P21576	704 aa	Known RBP	11.28	□□□□□ -0.6
RTN2	YDL204W	MCM3	P24279	971 aa	Known RBP	11.28	□□□□□ -0.6
RTN2	YDL204W	BMH1	P29311	267 aa	Known RBP	11.28	□□□□□ -0.6
RTN2	YDL204W	RPT6	Q01939	405 aa	Known RBP	11.28	□□□□□ -0.6
RTN2	YDL204W	HIS4	P00815	799 aa	Known RBP	11.27	□□□□□ -0.61
RTN2	YDL204W	GSM1	P42950	618 aa		11.27	□□□□□ -0.61
RTN2	YDL204W	MSN5	P52918	1224 aa		11.27	□□□□□ -0.61
RTN2	YDL204W	PRP42	Q03776	544 aa	Known RBP	11.27	□□□□□ -0.61
RTN2	YDL204W	MMR1	Q06324	491 aa		11.27	□□□□□ -0.61
RTN2	YDL204W	YOR296W	Q08748	1289 aa		11.27	□□□□□ -0.61
RTN2	YDL204W	CLF1	Q12309	687 aa	Predicted RBP	11.27	□□□□□ -0.61
RTN2	YDL204W	MET6	P05694	767 aa	Known RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	PRO3	P32263	286 aa	Known RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	ADE17	P38009	592 aa	Known RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	LEO1	P38439	464 aa		11.26	□□□□□ -0.61
RTN2	YDL204W	SET4	P42948	560 aa		11.26	□□□□□ -0.61
RTN2	YDL204W	PUS6	P53294	404 aa		11.26	□□□□□ -0.61
RTN2	YDL204W	VPS75	P53853	264 aa		11.26	□□□□□ -0.61
RTN2	YDL204W	EIS1	Q05050	843 aa	Known RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	ACK1	Q07622	623 aa	Predicted RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	KEL3	Q08979	651 aa	Predicted RBP	11.26	□□□□□ -0.61
RTN2	YDL204W	TFC8	Q12308	588 aa		11.26	□□□□□ -0.61
RTN2	YDL204W	ALG1	P16661	449 aa		11.25	□□□□□ -0.61
RTN2	YDL204W	RET1	P22276	1149 aa	Known RBP	11.25	□□□□□ -0.61
RTN2	YDL204W	CDC15	P27636	974 aa		11.25	□□□□□ -0.61
RTN2	YDL204W	RPL8B	P29453	256 aa	Known RBP	11.25	□□□□□ -0.61
RTN2	YDL204W	SAS3	P34218	831 aa		11.25	□□□□□ -0.61
RTN2	YDL204W	YKL222C	P35995	705 aa		11.25	□□□□□ -0.61
RTN2	YDL204W	YCG1	Q06680	1035 aa		11.25	□□□□□ -0.61
RTN2	YDL204W	MAK11	P20484	414 aa	Known RBP	11.24	□□□□□ -0.61
RTN2	YDL204W	ERT1	P38140	529 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	PSY4	P38193	441 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	TOM71	P38825	639 aa	Known RBP	11.24	□□□□□ -0.61
RTN2	YDL204W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
RTN2	YDL204W	YGL138C	P53122	345 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	GIS4	Q04233	774 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	PTC5	Q12511	572 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	MYO1	P08964	1928 aa		11.24	□□□□□ -0.61
RTN2	YDL204W	SAP190	P36123	1033 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	MGA2	P40578	1113 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	OSW7	P43611	510 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	NSG2	P53898	299 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	PSR2	Q07949	397 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	AFT2	Q08957	416 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	SFI1	Q12369	946 aa		11.23	□□□□□ -0.61
RTN2	YDL204W	THR4	P16120	514 aa	Known RBP	11.22	□□□□□ -0.61
RTN2	YDL204W	TCD1	P38756	429 aa		11.22	□□□□□ -0.61
RTN2	YDL204W	PES4	P39684	611 aa		11.22	□□□□□ -0.61
RTN2	YDL204W	TMA16	Q08687	178 aa		11.22	□□□□□ -0.61
RTN2	YDL204W	VPS60	Q03390	229 aa		11.21	□□□□□ -0.61
RTN2	YDL204W	RRG1	Q12167	365 aa	Predicted RBP	11.21	□□□□□ -0.61
RTN2	YDL204W	CDC37	P06101	506 aa	Known RBP	11.2	□□□□□ -0.62
RTN2	YDL204W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.2	□□□□□ -0.62	not detected
RTN2	YDL204W	MSH3	P25336	1018 aa		11.2	□□□□□ -0.62
RTN2	YDL204W	RPS7A	P26786	190 aa	Known RBP	11.2	□□□□□ -0.62
RTN2	YDL204W	CEP3	P40969	608 aa		11.2	□□□□□ -0.62
RTN2	YDL204W	VPS30	Q02948	557 aa		11.2	□□□□□ -0.62
RTN2	YDL204W	SMD2	Q06217	110 aa	Known RBP	11.2	□□□□□ -0.62
RTN2	YDL204W	PHO13	P19881	312 aa		11.19	□□□□□ -0.62
RTN2	YDL204W	SEC20	P28791	383 aa		11.19	□□□□□ -0.62
RTN2	YDL204W	DSE3	Q08729	430 aa		11.19	□□□□□ -0.62
RTN2	YDL204W	GSC2	P40989	1895 aa		11.19	□□□□□ -0.62
RTN2	YDL204W	PDC1	P06169	563 aa	Known RBP	11.18	□□□□□ -0.62
RTN2	YDL204W	HIR1	P32479	840 aa		11.18	□□□□□ -0.62
RTN2	YDL204W	SPT8	P38915	602 aa		11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms