RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	SCC2	Q04002	1493 aa		7.11	□□□□□ -1.27
RPC53	YDL150W	GLT1	Q12680	2145 aa	Known RBP	7.1	□□□□□ -1.27
RPC53	YDL150W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	7.1	□□□□□ -1.27	not detected
RPC53	YDL150W	ERP5	P38819	212 aa		7.1	□□□□□ -1.27
RPC53	YDL150W	CDC25	P04821	1589 aa		7.1	□□□□□ -1.27
RPC53	YDL150W	DNF1	P32660	1571 aa		7.1	□□□□□ -1.27
RPC53	YDL150W	FLP1	P03870	423 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	MSB1	P21339	1137 aa	Known RBP	7.09	□□□□□ -1.27
RPC53	YDL150W	TOS1	P38288	455 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	CTH1	P47976	325 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	GCV1	P48015	400 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	YGR130C	P53278	816 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	BSC2	Q05611	235 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	YPK9	Q12697	1472 aa		7.09	□□□□□ -1.27
RPC53	YDL150W	HTS1	P07263	546 aa	Known RBP	7.08	□□□□□ -1.28
RPC53	YDL150W	YOR223W	Q12015	292 aa		7.08	□□□□□ -1.28
RPC53	YDL150W	YBL113C	Q7M4S9	792 aa		7.08	□□□□□ -1.28
RPC53	YDL150W	RPO31	P04051	1460 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	GRS1	P38088	690 aa	Known RBP	7.06	□□□□□ -1.28
RPC53	YDL150W	ECM2	P38241	364 aa	Known RBP	7.06	□□□□□ -1.28
RPC53	YDL150W	MAG2	Q06436	670 aa	Known RBP	7.06	□□□□□ -1.28
RPC53	YDL150W	GIC2	Q06648	383 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	BRE4	Q07660	1125 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	GPI13	Q07830	1017 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	YLL054C	Q12244	843 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	FRT1	Q99332	602 aa		7.06	□□□□□ -1.28
RPC53	YDL150W	CYC7	P00045	113 aa		7.05	□□□□□ -1.28
RPC53	YDL150W	NUT2	Q06213	157 aa		7.05	□□□□□ -1.28
RPC53	YDL150W	ESC1	Q03661	1658 aa	Known RBP	7.05	□□□□□ -1.28
RPC53	YDL150W	RKR1	Q04781	1562 aa		7.04	□□□□□ -1.28
RPC53	YDL150W	RPA190	P10964	1664 aa	Known RBP	7.04	□□□□□ -1.28
RPC53	YDL150W	NUT1	P53114	1132 aa		7.04	□□□□□ -1.28
RPC53	YDL150W	MEC3	Q02574	474 aa		7.04	□□□□□ -1.28
RPC53	YDL150W	HAT1	Q12341	374 aa		7.04	□□□□□ -1.28
RPC53	YDL150W	PAN1	P32521	1480 aa		7.04	□□□□□ -1.28
RPC53	YDL150W	BNI1	P41832	1953 aa		7.03	□□□□□ -1.28
RPC53	YDL150W	YHL008C	P38750	627 aa		7.03	□□□□□ -1.28
RPC53	YDL150W	YMR074C	Q04773	145 aa		7.03	□□□□□ -1.28
RPC53	YDL150W	PMT7	Q06644	662 aa		7.03	□□□□□ -1.28
RPC53	YDL150W	GEA2	P39993	1459 aa	Known RBP	7.03	□□□□□ -1.28
RPC53	YDL150W	LIP5	P32875	414 aa		7.02	□□□□□ -1.29
RPC53	YDL150W	UTP22	P53254	1237 aa	Predicted RBP	7.02	□□□□□ -1.29
RPC53	YDL150W	YAF9	P53930	226 aa		7.02	□□□□□ -1.29
RPC53	YDL150W	GPT2	P36148	743 aa		7.01	□□□□□ -1.29
RPC53	YDL150W	YML020W	Q03722	664 aa		7.01	□□□□□ -1.29
RPC53	YDL150W	DOT1	Q04089	582 aa	Known RBP	7.01	□□□□□ -1.29
RPC53	YDL150W	ARL1	P38116	183 aa	Known RBP	7	□□□□□ -1.29
RPC53	YDL150W	INP54	Q08227	384 aa	Known RBP	7	□□□□□ -1.29
RPC53	YDL150W	MMM1	P41800	426 aa		6.99	□□□□□ -1.29
RPC53	YDL150W	NOP8	Q08287	484 aa	Predicted RBP	6.99	□□□□□ -1.29
RPC53	YDL150W	RVS167	P39743	482 aa	Known RBP	6.98	□□□□□ -1.29
RPC53	YDL150W	SAM37	P50110	327 aa		6.98	□□□□□ -1.29
RPC53	YDL150W	NOC3	Q07896	663 aa	Predicted RBP	6.98	□□□□□ -1.29
RPC53	YDL150W	IRC24	P40580	263 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	CIT3	P43635	486 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	YOR059C	Q08448	450 aa	Known RBP	6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-LR1	P0C2J3	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-F	P0CX63	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-GR2	P0CX64	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-C	P25384	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-DR2	Q03494	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY1B-DR1	Q03855	1755 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-DR3	Q07791	1770 aa	Known RBP	6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-OR1	Q12113	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY1B-BR	Q12193	1756 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY1B-GR3	Q12316	1755 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-DR1	Q12472	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY2B-OR2	Q12501	1770 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	TY1B-OR	Q92393	1755 aa		6.97	□□□□□ -1.29
RPC53	YDL150W	MMS1	Q06211	1407 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	GCD1	P09032	578 aa	Predicted RBP	6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-DR6	P0CX70	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-ER1	P0CX71	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-LR2	P0CX72	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-PL	P0CX73	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-JR1	P0CX74	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-LR3	P0CX75	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-ML2	P0CX76	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	ELM1	P32801	640 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	SEA4	P38164	1038 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	REI1	P38344	393 aa	Predicted RBP	6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-GR1	Q12085	440 aa		6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.96	□□□□□ -1.3
RPC53	YDL150W	TY1A-OL	Q92392	440 aa	Known RBP	6.96	□□□□□ -1.3
RPC53	YDL150W	SLD2	P34252	453 aa		6.95	□□□□□ -1.3
RPC53	YDL150W	WHI3	P34761	661 aa	Known RBP	6.95	□□□□□ -1.3
RPC53	YDL150W	SSF1	P38789	453 aa	Predicted RBP	6.95	□□□□□ -1.3
RPC53	YDL150W	ALT1	P52893	592 aa		6.95	□□□□□ -1.3
RPC53	YDL150W	YCS4	Q06156	1176 aa		6.95	□□□□□ -1.3
RPC53	YDL150W	AOS1	Q06624	347 aa		6.95	□□□□□ -1.3
RPC53	YDL150W	MCM5	P29496	775 aa	Known RBP	6.94	□□□□□ -1.3
RPC53	YDL150W	EXO5	P38289	585 aa		6.94	□□□□□ -1.3
RPC53	YDL150W	YHL050C	P38721	697 aa		6.94	□□□□□ -1.3
RPC53	YDL150W	CIC1	P38779	376 aa	Known RBP	6.94	□□□□□ -1.3
RPC53	YDL150W	YHR219W	P38900	624 aa		6.94	□□□□□ -1.3
RPC53	YDL150W	MSH4	P40965	878 aa	Predicted RBP	6.94	□□□□□ -1.3
RPC53	YDL150W	AVT1	P47082	602 aa		6.94	□□□□□ -1.3
RPC53	YDL150W	TOP2	P06786	1428 aa	Known RBP	6.93	□□□□□ -1.3
RPC53	YDL150W	MON1	P53129	644 aa		6.93	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms