RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Usp16Q99LG0 825 aa16.92■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Erich6bQ9D4S6 220 aa16.92■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Mre11Q61216 706 aa16.91■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Stk31Q99MW1 1018 aa16.91■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Idi1P58044 227 aa16.91■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Eif4a2P10630 407 aa16.9■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Ciz1Q8VEH2 845 aa16.9■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Ttc21aQ8C0S4 1314 aa16.9■□□□□ 0.3
Ube3a-216ENSMUST00000202945 KarsQ99MN1 595 aaKnown RBP16.9■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Ak7Q9D2H2 614 aa16.9■□□□□ 0.3
Ube3a-216ENSMUST00000202945 Paxip1Q6NZQ4 1056 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Ap3b2Q9JME5 1082 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Pik3c2bE9QAN8 1632 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Adamtsl3G3UXC7 1706 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Tmem94Q7TSH8 1360 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Gtf2a1Q99PM3 378 aa16.89■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Fam135bQ9DAI6 1403 aa16.88■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Chd4Q6PDQ2 1915 aaKnown RBP16.88■□□□□ 0.29
Ube3a-216ENSMUST00000202945 PtpruB1AUH1 1446 aa16.88■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Irx6Q9ER75 438 aa16.88■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Nckap5lQ6GQX2 1323 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 PaskQ8CEE6 1383 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Ipo8Q7TMY7 1010 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Znf521Q6KAS7 1311 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Pnmal2G3X9N3 661 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Rbm10Q99KG3 930 aaKnown RBP16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Pik3r4Q8VD65 1358 aa16.87■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Gemin5Q8BX17 1502 aaKnown RBP16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Gnai1B2RSH2 354 aa16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Plekhm2Q80TQ5 1018 aa16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Dennd6aQ8BH65 605 aa16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Gnai3Q9DC51 354 aa16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Chd2E9PZM4 1827 aaKnown RBP16.86■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Pcdh10E9PXQ7 1057 aa16.85■□□□□ 0.29
Ube3a-216ENSMUST00000202945 PtmaP26350 111 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Ggnbp2Q5SV77 696 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Usp32F8VPZ3 1604 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Aplp1Q03157 653 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Ccdc171E9Q1U1 1324 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Ccdc183A2AJB1 534 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 AU019823E9PUQ3 292 aa16.84■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Tnnt2P50752 301 aa16.83■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Q3UPC7 1272 aa16.83■□□□□ 0.29
Ube3a-216ENSMUST00000202945 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.83■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Snap23O09044 210 aa16.83■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Slit3Q9WVB4 1523 aa16.82■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Vamp4O70480 141 aa16.82■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Rrp9Q91WM3 475 aaKnown RBP16.82■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Rreb1Q3UH06 1700 aaKnown RBP16.82■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Chrna2Q91X60 512 aa16.82■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Cps1Q8C196 1500 aa16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Nsd3Q6P2L6 1439 aa16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Tnrc6bQ8BKI2 1810 aaKnown RBP16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Ccne1Q61457 408 aa16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Rrp12Q6P5B0 1295 aaKnown RBP16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 GphnQ8BUV3 769 aaKnown RBP16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 4930407I10RikD3Z5T8 1512 aa16.81■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Uhrf1bp1B2KF50 1429 aa16.8■□□□□ 0.28
Ube3a-216ENSMUST00000202945 TmpoQ61033 693 aaKnown RBP16.8■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Slc35g1Q8BY79 368 aa16.8■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Tmem132eQ6IEE6 982 aa16.79■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Frmpd2A0A140LI67 1392 aa16.79■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Astn2Q80Z10 1352 aa16.79■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Ncbp3Q8BZR9 615 aaKnown RBP16.79■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Rtf1A2AQ19 715 aaKnown RBP16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Hoxb7P09024 217 aa16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Nlgn1Q99K10 843 aa16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 FancaQ9JL70 1439 aa16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Ppp2r3aB2RXC8 1150 aa16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Kif1aP33173 1695 aa16.78■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Mfap1aC0HKD8 439 aaKnown RBP16.77■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Mfap1bC0HKD9 439 aaKnown RBP16.77■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Tnnt1O88346 262 aa16.77■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Ric3Q8BPM6 367 aa16.77■□□□□ 0.28
Ube3a-216ENSMUST00000202945 Prim1P20664 417 aa16.77■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Aldh1l1Q8R0Y6 902 aa16.76■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Nkx1-2P42580 305 aa16.76■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Atp7bQ64446 1462 aa16.76■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Eya1P97767 591 aa16.75■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Aifm3Q3TY86 605 aa16.75■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Parp14Q2EMV9 1817 aa16.75■□□□□ 0.27
Ube3a-216ENSMUST00000202945 TimelessQ9R1X4 1197 aa16.74■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Sirt1Q923E4 737 aa16.73■□□□□ 0.27
Ube3a-216ENSMUST00000202945 MvpQ9EQK5 861 aa16.73■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Abcc10Q8R4P9 1501 aa16.73■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Fbxo2Q80UW2 297 aa16.72■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Triml2E9PW10 424 aa16.72■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Cc2d1aQ8K1A6 943 aa16.72■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Atl3Q91YH5 541 aa16.72■□□□□ 0.27
Ube3a-216ENSMUST00000202945 Fyb1O35601 819 aa16.71■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Rfx1P48377 963 aa16.71■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Zmym3Q9JLM4 1370 aa16.7■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Q3TQI7 289 aaKnown RBP16.7■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Cog6Q8R3I3 657 aa16.7■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Spef2Q8C9J3 1734 aa16.7■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Vgll3P85442 326 aa16.7■□□□□ 0.26
Ube3a-216ENSMUST00000202945 SkilQ60665 675 aa16.69■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Kif18aQ91WD7 886 aa16.69■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Evi5lH3BKQ3 813 aa16.69■□□□□ 0.26
Ube3a-216ENSMUST00000202945 Znf335A2A5K6 1337 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms