RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 NischQ80TM9 1593 aa26.01■■□□□ 1.75
Ube3a-216ENSMUST00000202945 Gm35339A0A140LHH9 1649 aa25.32■■□□□ 1.64
Ube3a-216ENSMUST00000202945 Abcc9P70170 1546 aa25.13■■□□□ 1.61
Ube3a-216ENSMUST00000202945 Abcc8B2RUS7 1588 aa24.66■■□□□ 1.54
Ube3a-216ENSMUST00000202945 Rhox8Q6VSS7 320 aa24.47■■□□□ 1.51
Ube3a-216ENSMUST00000202945 Rtl1Q7M732 1744 aa23.17■■□□□ 1.3
Ube3a-216ENSMUST00000202945 ScribQ80U72 1612 aa23.12■■□□□ 1.29
Ube3a-216ENSMUST00000202945 Ccdc180J3QNE4 1664 aa22.83■■□□□ 1.25
Ube3a-216ENSMUST00000202945 Rb1cc1Q9ESK9 1588 aa22.81■■□□□ 1.24
Ube3a-216ENSMUST00000202945 Dcaf1Q80TR8 1506 aa22.74■■□□□ 1.23
Ube3a-216ENSMUST00000202945 Kdm5dQ62240 1548 aa22.71■■□□□ 1.23
Ube3a-216ENSMUST00000202945 Ccdc136Q3TVA9 1136 aa22.7■■□□□ 1.22
Ube3a-216ENSMUST00000202945 Zcchc6Q5BLK4 1491 aaKnown RBP22.51■■□□□ 1.19
Ube3a-216ENSMUST00000202945 NacadQ5SWP3 1504 aa22.49■■□□□ 1.19
Ube3a-216ENSMUST00000202945 Baz1aO88379 1555 aa22.44■■□□□ 1.18
Ube3a-216ENSMUST00000202945 Ehmt2Q9Z148 1263 aaKnown RBP22.24■■□□□ 1.15
Ube3a-216ENSMUST00000202945 Sycp2Q9CUU3 1500 aa21.99■■□□□ 1.11
Ube3a-216ENSMUST00000202945 Rpgrip1Q9EPQ2 1331 aa21.98■■□□□ 1.11
Ube3a-216ENSMUST00000202945 Trim41Q5NCC3 630 aa21.95■■□□□ 1.1
Ube3a-216ENSMUST00000202945 Smarca2Q6DIC0 1577 aa21.88■■□□□ 1.09
Ube3a-216ENSMUST00000202945 HrcG5E8J6 738 aa21.86■■□□□ 1.09
Ube3a-216ENSMUST00000202945 Crybg2B7ZCC2 1516 aa21.83■■□□□ 1.09
Ube3a-216ENSMUST00000202945 Cngb1E1AZ71 1325 aa21.74■■□□□ 1.07
Ube3a-216ENSMUST00000202945 Cecr2E9Q2Z1 1453 aa21.61■■□□□ 1.05
Ube3a-216ENSMUST00000202945 BicraF8VPZ9 1578 aa21.55■■□□□ 1.04
Ube3a-216ENSMUST00000202945 Esf1Q3V1V3 845 aaKnown RBP21.5■■□□□ 1.03
Ube3a-216ENSMUST00000202945 Brd4Q9ESU6 1400 aaKnown RBP21.47■■□□□ 1.03
Ube3a-216ENSMUST00000202945 Gab3Q8BSM5 595 aa21.45■■□□□ 1.02
Ube3a-216ENSMUST00000202945 Chic1Q8CBW7 227 aa21.38■■□□□ 1.01
Ube3a-216ENSMUST00000202945 Synj1Q8CHC4 1574 aa21.34■■□□□ 1.01
Ube3a-216ENSMUST00000202945 Cep164Q5DU05 1446 aa21.32■■□□□ 1
Ube3a-216ENSMUST00000202945 Pcgf6Q99NA9 353 aa21.3■■□□□ 1
Ube3a-216ENSMUST00000202945 Rsf1E9PWW9 1441 aaKnown RBP21.26■□□□□ 0.99
Ube3a-216ENSMUST00000202945 Acin1Q9JIX8 1338 aaKnown RBP21.24■□□□□ 0.99
Ube3a-216ENSMUST00000202945 Golga3P55937 1487 aa21.19■□□□□ 0.98
Ube3a-216ENSMUST00000202945 CftrP26361 1476 aa21.18■□□□□ 0.98
Ube3a-216ENSMUST00000202945 Ccdc88bQ4QRL3 1481 aa21.17■□□□□ 0.98
Ube3a-216ENSMUST00000202945 Smarca4Q3TKT4 1613 aaKnown RBP21.04■□□□□ 0.96
Ube3a-216ENSMUST00000202945 Cttnbp2B9EJA2 1648 aa21.01■□□□□ 0.95
Ube3a-216ENSMUST00000202945 Zeb1Q64318 1117 aa20.94■□□□□ 0.94
Ube3a-216ENSMUST00000202945 Las1lA2BE28 776 aaKnown RBP20.86■□□□□ 0.93
Ube3a-216ENSMUST00000202945 Cc2d2aQ8CFW7 1633 aa20.84■□□□□ 0.93
Ube3a-216ENSMUST00000202945 Top2bQ64511 1612 aa20.83■□□□□ 0.92
Ube3a-216ENSMUST00000202945 Iqgap2Q3UQ44 1575 aa20.83■□□□□ 0.92
Ube3a-216ENSMUST00000202945 Supt5hO55201 1082 aaKnown RBP20.81■□□□□ 0.92
Ube3a-216ENSMUST00000202945 Myt1lP97500 1187 aa20.73■□□□□ 0.91
Ube3a-216ENSMUST00000202945 Atad2bE9Q166 1460 aaKnown RBP20.72■□□□□ 0.91
Ube3a-216ENSMUST00000202945 Pds5bQ4VA53 1446 aaKnown RBP20.67■□□□□ 0.9
Ube3a-216ENSMUST00000202945 Npm2Q80W85 207 aa20.67■□□□□ 0.9
Ube3a-216ENSMUST00000202945 Fmn1Q05860 1466 aa20.63■□□□□ 0.89
Ube3a-216ENSMUST00000202945 Il27Q8K3I6 234 aa20.62■□□□□ 0.89
Ube3a-216ENSMUST00000202945 Neurod1Q60867 357 aa20.58■□□□□ 0.89
Ube3a-216ENSMUST00000202945 Top2aQ01320 1528 aaKnown RBP20.47■□□□□ 0.87
Ube3a-216ENSMUST00000202945 UbtfP25976 765 aaKnown RBP20.46■□□□□ 0.87
Ube3a-216ENSMUST00000202945 Frmpd1A2AKB4 1549 aa20.45■□□□□ 0.86
Ube3a-216ENSMUST00000202945 Wdr66E9Q743 1299 aa20.43■□□□□ 0.86
Ube3a-216ENSMUST00000202945 Rapgef2Q8CHG7 1496 aa20.42■□□□□ 0.86
Ube3a-216ENSMUST00000202945 Mier1Q5UAK0 511 aa20.41■□□□□ 0.86
Ube3a-216ENSMUST00000202945 Ercc6F8VPZ5 1481 aa20.41■□□□□ 0.86
Ube3a-216ENSMUST00000202945 Kif15Q6P9L6 1387 aa20.37■□□□□ 0.85
Ube3a-216ENSMUST00000202945 Wdr62Q3U3T8 1523 aa20.37■□□□□ 0.85
Ube3a-216ENSMUST00000202945 Cep162Q6ZQ06 1403 aa20.36■□□□□ 0.85
Ube3a-216ENSMUST00000202945 Plekhg3Q4VAC9 1341 aa20.24■□□□□ 0.83
Ube3a-216ENSMUST00000202945 CenpbP27790 599 aa20.23■□□□□ 0.83
Ube3a-216ENSMUST00000202945 Ppargc1bQ8VHJ7 1014 aa20.23■□□□□ 0.83
Ube3a-216ENSMUST00000202945 Ap3b1Q9Z1T1 1105 aa20.22■□□□□ 0.83
Ube3a-216ENSMUST00000202945 Gm38655A0A286YDK6 273 aa20.2■□□□□ 0.82
Ube3a-216ENSMUST00000202945 TnnQ80Z71 1560 aa20.19■□□□□ 0.82
Ube3a-216ENSMUST00000202945 Clip1Q922J3 1391 aa20.17■□□□□ 0.82
Ube3a-216ENSMUST00000202945 Ubl4bQ9CQ84 188 aa20.17■□□□□ 0.82
Ube3a-216ENSMUST00000202945 PtprkP35822 1457 aa20.16■□□□□ 0.82
Ube3a-216ENSMUST00000202945 Csrnp3P59055 597 aa20.15■□□□□ 0.82
Ube3a-216ENSMUST00000202945 Unc13aQ4KUS2 1712 aa20.15■□□□□ 0.82
Ube3a-216ENSMUST00000202945 Lamc3Q9R0B6 1581 aa20.13■□□□□ 0.81
Ube3a-216ENSMUST00000202945 NefmP08553 848 aa20.12■□□□□ 0.81
Ube3a-216ENSMUST00000202945 Npm1Q61937 292 aaKnown RBP20.07■□□□□ 0.8
Ube3a-216ENSMUST00000202945 Ccdc18Q640L5 1455 aa20.05■□□□□ 0.8
Ube3a-216ENSMUST00000202945 Phldb1Q6PDH0 1371 aaKnown RBP20.04■□□□□ 0.8
Ube3a-216ENSMUST00000202945 Camsap1A2AHC3 1581 aa20.04■□□□□ 0.8
Ube3a-216ENSMUST00000202945 1700123L14RikQ3V2K7 440 aa20.03■□□□□ 0.8
Ube3a-216ENSMUST00000202945 Arhgap35Q91YM2 1499 aa20.03■□□□□ 0.8
Ube3a-216ENSMUST00000202945 Cux2P70298 1426 aa20.02■□□□□ 0.79
Ube3a-216ENSMUST00000202945 DiexfQ8BTT6 772 aaKnown RBP19.99■□□□□ 0.79
Ube3a-216ENSMUST00000202945 Shroom4Q1W617 1475 aa19.95■□□□□ 0.78
Ube3a-216ENSMUST00000202945 Eif4g1Q6NZJ6 1600 aaKnown RBP19.95■□□□□ 0.78
Ube3a-216ENSMUST00000202945 Thoc2B1AZI6 1594 aaKnown RBP19.93■□□□□ 0.78
Ube3a-216ENSMUST00000202945 NrkQ9R0G8 1455 aa19.92■□□□□ 0.78
Ube3a-216ENSMUST00000202945 Setd5Q5XJV7 1441 aa19.92■□□□□ 0.78
Ube3a-216ENSMUST00000202945 Grin2bQ01097 1482 aa19.91■□□□□ 0.78
Ube3a-216ENSMUST00000202945 Eea1Q8BL66 1411 aa19.89■□□□□ 0.77
Ube3a-216ENSMUST00000202945 Baz1bQ9Z277 1479 aa19.89■□□□□ 0.77
Ube3a-216ENSMUST00000202945 Sall2Q9QX96 1004 aa19.86■□□□□ 0.77
Ube3a-216ENSMUST00000202945 Arap1Q4LDD4 1452 aa19.82■□□□□ 0.76
Ube3a-216ENSMUST00000202945 Cdk11bP24788 784 aaKnown RBP19.82■□□□□ 0.76
Ube3a-216ENSMUST00000202945 Lmod2Q3UHZ5 550 aa19.81■□□□□ 0.76
Ube3a-216ENSMUST00000202945 LrpprcQ6PB66 1392 aaKnown RBP19.78■□□□□ 0.76
Ube3a-216ENSMUST00000202945 Mroh2bQ7M6Y6 1581 aa19.76■□□□□ 0.75
Ube3a-216ENSMUST00000202945 Nop58Q6DFW4 536 aaKnown RBP19.74■□□□□ 0.75
Ube3a-216ENSMUST00000202945 Dnajc5bQ9CQ94 199 aa19.73■□□□□ 0.75
Ube3a-216ENSMUST00000202945 Map3k1P53349 1493 aa19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms