Protein–RNA interactions for Protein: Q91WM3

Rrp9, U3 small nucleolar RNA-interacting protein 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp9Q91WM3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Rrp9Q91WM3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Rrp9Q91WM3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Rrp9Q91WM3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.52■■■■□ 3.44
Rrp9Q91WM3 Psd-208ENSMUST00000224556 2034 ntBASIC36.43■■■■□ 3.42
Rrp9Q91WM3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Rrp9Q91WM3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Rrp9Q91WM3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Rrp9Q91WM3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Rrp9Q91WM3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Rrp9Q91WM3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Rrp9Q91WM3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rrp9Q91WM3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rrp9Q91WM3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Rrp9Q91WM3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rrp9Q91WM3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Rrp9Q91WM3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Rrp9Q91WM3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Rrp9Q91WM3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Rrp9Q91WM3 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.96■■■■□ 3.03
Rrp9Q91WM3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rrp9Q91WM3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Rrp9Q91WM3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rrp9Q91WM3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rrp9Q91WM3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
Rrp9Q91WM3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.26■■■□□ 2.91
Rrp9Q91WM3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rrp9Q91WM3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
Rrp9Q91WM3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Rrp9Q91WM3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rrp9Q91WM3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rrp9Q91WM3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rrp9Q91WM3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Rrp9Q91WM3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
Rrp9Q91WM3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rrp9Q91WM3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Rrp9Q91WM3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.49■■■□□ 2.79
Rrp9Q91WM3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
Rrp9Q91WM3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rrp9Q91WM3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rrp9Q91WM3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.4■■■□□ 2.78
Rrp9Q91WM3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rrp9Q91WM3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rrp9Q91WM3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.33■■■□□ 2.77
Rrp9Q91WM3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rrp9Q91WM3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rrp9Q91WM3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rrp9Q91WM3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Rrp9Q91WM3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Rrp9Q91WM3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rrp9Q91WM3 Zxda-201ENSMUST00000117281 2621 ntBASIC31.94■■■□□ 2.7
Rrp9Q91WM3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.87■■■□□ 2.69
Rrp9Q91WM3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Rrp9Q91WM3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
Rrp9Q91WM3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Rrp9Q91WM3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rrp9Q91WM3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rrp9Q91WM3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rrp9Q91WM3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Rrp9Q91WM3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rrp9Q91WM3 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.46■■■□□ 2.63
Rrp9Q91WM3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
Rrp9Q91WM3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rrp9Q91WM3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
Rrp9Q91WM3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Rrp9Q91WM3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rrp9Q91WM3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rrp9Q91WM3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.28■■■□□ 2.6
Rrp9Q91WM3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rrp9Q91WM3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rrp9Q91WM3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rrp9Q91WM3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rrp9Q91WM3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Rrp9Q91WM3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rrp9Q91WM3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rrp9Q91WM3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rrp9Q91WM3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rrp9Q91WM3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rrp9Q91WM3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Rrp9Q91WM3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rrp9Q91WM3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Rrp9Q91WM3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rrp9Q91WM3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.97■■■□□ 2.55
Rrp9Q91WM3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rrp9Q91WM3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Rrp9Q91WM3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rrp9Q91WM3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rrp9Q91WM3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Rrp9Q91WM3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Rrp9Q91WM3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rrp9Q91WM3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rrp9Q91WM3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Rrp9Q91WM3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rrp9Q91WM3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Rrp9Q91WM3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.5■■■□□ 2.47
Rrp9Q91WM3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rrp9Q91WM3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rrp9Q91WM3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rrp9Q91WM3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rrp9Q91WM3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms