RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Pik3r4Q8VD65 1358 aa12.1□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Ppp2r3aB2RXC8 1150 aa12.1□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Tpm2P58774 284 aa12.1□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 G3bp1P97855 465 aaKnown RBP12.1□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Cabp2Q9JLK4 216 aa12.1□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Pik3c2bE9QAN8 1632 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Ppp1r15aP17564 657 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Aplp1Q03157 653 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 PaskQ8CEE6 1383 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Tmc1Q8R4P5 757 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Klhdc4Q921I2 584 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Cdc37l1Q9CZP7 335 aa12.09□□□□□ -0.47
Cpsf3-201ENSMUST00000067284 Ythdc1E9Q5K9 736 aaKnown RBP12.08□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Fchsd2Q3USJ8 740 aa12.08□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Idi2Q8BFZ6 227 aa12.08□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Rsph6aQ8CDR2 708 aa12.08□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Atp7bQ64446 1462 aa12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Vamp4O70480 141 aa12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Plekhm2Q80TQ5 1018 aa12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Chd2E9PZM4 1827 aaKnown RBP12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Nsd3Q6P2L6 1439 aa12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Znf541Q0GGX2 1363 aa12.07□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Q3UPC7 1272 aa12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Ppp1r9bQ6R891 817 aaKnown RBP12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Ciz1Q8VEH2 845 aa12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Tnrc6bQ8BKI2 1810 aaKnown RBP12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Fam43aQ8BUP8 424 aa12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 PtpruB1AUH1 1446 aa12.06□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Dip2bQ3UH60 1574 aa12.05□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Spef2Q8C9J3 1734 aa12.05□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Kif1aP33173 1695 aa12.05□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 MpripP97434 1024 aa12.05□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Clcn1Q64347 994 aa12.05□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Ccdc171E9Q1U1 1324 aa12.04□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Adamtsl3G3UXC7 1706 aa12.04□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 U2surpQ6NV83 1029 aaKnown RBP12.04□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Eif4a2P10630 407 aa12.03□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Gemin5Q8BX17 1502 aaKnown RBP12.03□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Atl3Q91YH5 541 aa12.03□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Usp16Q99LG0 825 aa12.03□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Cps1Q8C196 1500 aa12.03□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Znf692Q3U381 531 aa12.02□□□□□ -0.48
Cpsf3-201ENSMUST00000067284 Mfap1aC0HKD8 439 aaKnown RBP12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Mfap1bC0HKD9 439 aaKnown RBP12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Isy1Q69ZQ2 285 aaKnown RBP12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Tnpo1Q8BFY9 898 aaKnown RBP12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Aldh1l1Q8R0Y6 902 aa12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Phlpp2Q8BXA7 1320 aa12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Kif18aQ91WD7 886 aa12.01□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Kif20bQ80WE4 1774 aaKnown RBP12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Slit3Q9WVB4 1523 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Gnai1B2RSH2 354 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Sox12Q04890 314 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Tbc1d32Q3URV1 1296 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Zfp91Q62511 572 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Cog6Q8R3I3 657 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Gnai3Q9DC51 354 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Lekr1B2RVN1 116 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Aifm3Q3TY86 605 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Q3UJC8 639 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Ddrgk1Q80WW9 315 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Kif2cQ922S8 721 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Parp14Q2EMV9 1817 aa12□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 1700019A02RikA0A087WPV9 146 aa11.99□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Sptbn5F6UCX4 1208 aa11.99□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Pibf1E9Q6K3 756 aa11.99□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Snap23O09044 210 aa11.99□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 SkilQ60665 675 aa11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 MvpQ9EQK5 861 aa11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 N4bp2F8VQG7 1678 aaKnown RBP11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 PogkQ80TC5 607 aa11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Safb2Q80YR5 991 aaKnown RBP11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Nckap5lQ6GQX2 1323 aa11.98□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Ankrd44B2RXR6 993 aa11.97□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Brd1E9PZ26 1189 aaKnown RBP11.97□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Idi1P58044 227 aa11.97□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 PzpQ61838 1495 aa11.97□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Map2P20357 1828 aa11.96□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Chrna2Q91X60 512 aa11.96□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Stk31Q99MW1 1018 aa11.96□□□□□ -0.49
Cpsf3-201ENSMUST00000067284 Ggnbp2Q5SV77 696 aa11.96□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Paxip1Q6NZQ4 1056 aa11.96□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Rreb1Q3UH06 1700 aaKnown RBP11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Rabep1O35551 862 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Prim1P20664 417 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Vgll3P85442 326 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Hs1bp3Q3TC93 395 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Mdc1Q5PSV9 1707 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Med1Q925J9 1575 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Hoxb7P09024 217 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 MarsQ68FL6 902 aaKnown RBP11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Ric3Q8BPM6 367 aa11.95□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Pik3c2aQ61194 1686 aa11.94□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Kif24Q6NWW5 1356 aa11.94□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Ubr1O70481 1757 aa11.94□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Camta1A2A891 1682 aa11.94□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 TmpoQ61033 693 aaKnown RBP11.94□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 NalcnQ8BXR5 1738 aa11.93□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Astn2Q80Z10 1352 aa11.93□□□□□ -0.5
Cpsf3-201ENSMUST00000067284 Trim27Q62158 513 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms