RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 NischQ80TM9 1593 aa18.58■□□□□ 0.56
Cpsf3-201ENSMUST00000067284 Gm35339A0A140LHH9 1649 aa18.22■□□□□ 0.51
Cpsf3-201ENSMUST00000067284 Abcc9P70170 1546 aa18.02■□□□□ 0.48
Cpsf3-201ENSMUST00000067284 Abcc8B2RUS7 1588 aa17.65■□□□□ 0.42
Cpsf3-201ENSMUST00000067284 Rhox8Q6VSS7 320 aa17.26■□□□□ 0.35
Cpsf3-201ENSMUST00000067284 Rtl1Q7M732 1744 aa16.79■□□□□ 0.28
Cpsf3-201ENSMUST00000067284 ScribQ80U72 1612 aa16.54■□□□□ 0.24
Cpsf3-201ENSMUST00000067284 Ccdc180J3QNE4 1664 aa16.52■□□□□ 0.24
Cpsf3-201ENSMUST00000067284 Zcchc6Q5BLK4 1491 aaKnown RBP16.37■□□□□ 0.21
Cpsf3-201ENSMUST00000067284 Rpgrip1Q9EPQ2 1331 aa16.36■□□□□ 0.21
Cpsf3-201ENSMUST00000067284 Dcaf1Q80TR8 1506 aa16.33■□□□□ 0.21
Cpsf3-201ENSMUST00000067284 Rb1cc1Q9ESK9 1588 aa16.28■□□□□ 0.2
Cpsf3-201ENSMUST00000067284 Kdm5dQ62240 1548 aa16.18■□□□□ 0.18
Cpsf3-201ENSMUST00000067284 Ccdc136Q3TVA9 1136 aa16.07■□□□□ 0.16
Cpsf3-201ENSMUST00000067284 Baz1aO88379 1555 aa16.06■□□□□ 0.16
Cpsf3-201ENSMUST00000067284 NacadQ5SWP3 1504 aa15.97■□□□□ 0.15
Cpsf3-201ENSMUST00000067284 HrcG5E8J6 738 aa15.76■□□□□ 0.11
Cpsf3-201ENSMUST00000067284 Smarca2Q6DIC0 1577 aa15.71■□□□□ 0.11
Cpsf3-201ENSMUST00000067284 Crybg2B7ZCC2 1516 aa15.66■□□□□ 0.1
Cpsf3-201ENSMUST00000067284 Sycp2Q9CUU3 1500 aa15.66■□□□□ 0.1
Cpsf3-201ENSMUST00000067284 Ehmt2Q9Z148 1263 aaKnown RBP15.66■□□□□ 0.1
Cpsf3-201ENSMUST00000067284 Trim41Q5NCC3 630 aa15.6■□□□□ 0.09
Cpsf3-201ENSMUST00000067284 Cecr2E9Q2Z1 1453 aa15.44■□□□□ 0.06
Cpsf3-201ENSMUST00000067284 Acin1Q9JIX8 1338 aaKnown RBP15.42■□□□□ 0.06
Cpsf3-201ENSMUST00000067284 BicraF8VPZ9 1578 aa15.39■□□□□ 0.05
Cpsf3-201ENSMUST00000067284 Cep164Q5DU05 1446 aa15.35■□□□□ 0.05
Cpsf3-201ENSMUST00000067284 Cngb1E1AZ71 1325 aa15.32■□□□□ 0.04
Cpsf3-201ENSMUST00000067284 Chic1Q8CBW7 227 aa15.31■□□□□ 0.04
Cpsf3-201ENSMUST00000067284 Rsf1E9PWW9 1441 aaKnown RBP15.28■□□□□ 0.04
Cpsf3-201ENSMUST00000067284 Brd4Q9ESU6 1400 aaKnown RBP15.28■□□□□ 0.04
Cpsf3-201ENSMUST00000067284 Synj1Q8CHC4 1574 aa15.27■□□□□ 0.03
Cpsf3-201ENSMUST00000067284 Pcgf6Q99NA9 353 aa15.22■□□□□ 0.03
Cpsf3-201ENSMUST00000067284 Ccdc88bQ4QRL3 1481 aa15.2■□□□□ 0.02
Cpsf3-201ENSMUST00000067284 Gab3Q8BSM5 595 aa15.19■□□□□ 0.02
Cpsf3-201ENSMUST00000067284 Golga3P55937 1487 aa15.16■□□□□ 0.02
Cpsf3-201ENSMUST00000067284 CftrP26361 1476 aa15.13■□□□□ 0.01
Cpsf3-201ENSMUST00000067284 Myt1Q8CFC2 1127 aa15.12■□□□□ 0.01
Cpsf3-201ENSMUST00000067284 Esf1Q3V1V3 845 aaKnown RBP15.07■□□□□ 0
Cpsf3-201ENSMUST00000067284 Top2bQ64511 1612 aa15.02□□□□□ -0.01
Cpsf3-201ENSMUST00000067284 Cttnbp2B9EJA2 1648 aa15.01□□□□□ -0.01
Cpsf3-201ENSMUST00000067284 Las1lA2BE28 776 aaKnown RBP15.01□□□□□ -0.01
Cpsf3-201ENSMUST00000067284 Smarca4Q3TKT4 1613 aaKnown RBP14.98□□□□□ -0.01
Cpsf3-201ENSMUST00000067284 Cc2d2aQ8CFW7 1633 aa14.95□□□□□ -0.02
Cpsf3-201ENSMUST00000067284 Iqgap2Q3UQ44 1575 aa14.8□□□□□ -0.04
Cpsf3-201ENSMUST00000067284 Fmn1Q05860 1466 aa14.74□□□□□ -0.05
Cpsf3-201ENSMUST00000067284 CenpbP27790 599 aa14.72□□□□□ -0.05
Cpsf3-201ENSMUST00000067284 Top2aQ01320 1528 aaKnown RBP14.71□□□□□ -0.05
Cpsf3-201ENSMUST00000067284 Mier1Q5UAK0 511 aa14.71□□□□□ -0.05
Cpsf3-201ENSMUST00000067284 Rapgef2Q8CHG7 1496 aa14.7□□□□□ -0.06
Cpsf3-201ENSMUST00000067284 Atad2bE9Q166 1460 aaKnown RBP14.67□□□□□ -0.06
Cpsf3-201ENSMUST00000067284 Supt5hO55201 1082 aaKnown RBP14.67□□□□□ -0.06
Cpsf3-201ENSMUST00000067284 Neurod1Q60867 357 aa14.64□□□□□ -0.07
Cpsf3-201ENSMUST00000067284 Myt1lP97500 1187 aa14.61□□□□□ -0.07
Cpsf3-201ENSMUST00000067284 Cep162Q6ZQ06 1403 aa14.6□□□□□ -0.07
Cpsf3-201ENSMUST00000067284 Pds5bQ4VA53 1446 aaKnown RBP14.57□□□□□ -0.08
Cpsf3-201ENSMUST00000067284 Zeb1Q64318 1117 aa14.56□□□□□ -0.08
Cpsf3-201ENSMUST00000067284 UbtfP25976 765 aaKnown RBP14.56□□□□□ -0.08
Cpsf3-201ENSMUST00000067284 Frmpd1A2AKB4 1549 aa14.54□□□□□ -0.08
Cpsf3-201ENSMUST00000067284 Npm2Q80W85 207 aa14.52□□□□□ -0.08
Cpsf3-201ENSMUST00000067284 TnnQ80Z71 1560 aa14.52□□□□□ -0.09
Cpsf3-201ENSMUST00000067284 DiexfQ8BTT6 772 aaKnown RBP14.5□□□□□ -0.09
Cpsf3-201ENSMUST00000067284 NefmP08553 848 aa14.49□□□□□ -0.09
Cpsf3-201ENSMUST00000067284 Wdr62Q3U3T8 1523 aa14.48□□□□□ -0.09
Cpsf3-201ENSMUST00000067284 Eif4g1Q6NZJ6 1600 aaKnown RBP14.48□□□□□ -0.09
Cpsf3-201ENSMUST00000067284 PtprkP35822 1457 aa14.45□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 Unc13aQ4KUS2 1712 aa14.44□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 1700123L14RikQ3V2K7 440 aa14.44□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 Il27Q8K3I6 234 aa14.42□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 Plekhg3Q4VAC9 1341 aa14.4□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 Anks4bQ8K3X6 423 aa14.4□□□□□ -0.1
Cpsf3-201ENSMUST00000067284 Lamc3Q9R0B6 1581 aa14.39□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Clip1Q922J3 1391 aa14.38□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Arhgap35Q91YM2 1499 aa14.37□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Kif15Q6P9L6 1387 aa14.37□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Sall2Q9QX96 1004 aa14.34□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Aplp2Q06335 707 aa14.34□□□□□ -0.11
Cpsf3-201ENSMUST00000067284 Ercc6F8VPZ5 1481 aa14.33□□□□□ -0.12
Cpsf3-201ENSMUST00000067284 NrkQ9R0G8 1455 aa14.31□□□□□ -0.12
Cpsf3-201ENSMUST00000067284 Camsap1A2AHC3 1581 aa14.3□□□□□ -0.12
Cpsf3-201ENSMUST00000067284 Ap3b1Q9Z1T1 1105 aa14.27□□□□□ -0.13
Cpsf3-201ENSMUST00000067284 Shroom4Q1W617 1475 aa14.26□□□□□ -0.13
Cpsf3-201ENSMUST00000067284 Arap1Q4LDD4 1452 aa14.26□□□□□ -0.13
Cpsf3-201ENSMUST00000067284 Aebp2Q9Z248 504 aaKnown RBP14.25□□□□□ -0.13
Cpsf3-201ENSMUST00000067284 Ncapd3Q6ZQK0 1506 aa14.21□□□□□ -0.13
Cpsf3-201ENSMUST00000067284 Grin2bQ01097 1482 aa14.2□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Bcl11aQ9QYE3 773 aa14.19□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Eea1Q8BL66 1411 aa14.19□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Setd5Q5XJV7 1441 aa14.17□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Ccdc18Q640L5 1455 aa14.17□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Ppargc1bQ8VHJ7 1014 aa14.16□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Arhgef5E9Q7D5 1581 aa14.16□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Wdr66E9Q743 1299 aa14.15□□□□□ -0.14
Cpsf3-201ENSMUST00000067284 Thoc2B1AZI6 1594 aaKnown RBP14.14□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Mroh2bQ7M6Y6 1581 aa14.14□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Map3k1P53349 1493 aa14.13□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Baz1bQ9Z277 1479 aa14.13□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Cux2P70298 1426 aa14.13□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Phldb1Q6PDH0 1371 aaKnown RBP14.13□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Csrnp3P59055 597 aa14.12□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 AqrQ8CFQ3 1481 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms