Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm25239-201ENSMUST00000174915 86 ntBASIC39.26■■■■□ 3.88
Fam43aQ8BUP8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Fam43aQ8BUP8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Fam43aQ8BUP8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Fam43aQ8BUP8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Fam43aQ8BUP8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Fam43aQ8BUP8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Fam43aQ8BUP8 Gm15042-201ENSMUST00000120212 883 ntBASIC34.63■■■■□ 3.13
Fam43aQ8BUP8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13
Fam43aQ8BUP8 Gm15045-201ENSMUST00000117359 883 ntBASIC33.98■■■■□ 3.03
Fam43aQ8BUP8 Gm24109-201ENSMUST00000175489 103 ntBASIC33.88■■■■□ 3.01
Fam43aQ8BUP8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Fam43aQ8BUP8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Fam43aQ8BUP8 Psd-208ENSMUST00000224556 2034 ntBASIC33.24■■■□□ 2.91
Fam43aQ8BUP8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
Fam43aQ8BUP8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.96■■■□□ 2.87
Fam43aQ8BUP8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Fam43aQ8BUP8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
Fam43aQ8BUP8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Fam43aQ8BUP8 Gm23366-201ENSMUST00000175022 89 ntBASIC32.77■■■□□ 2.84
Fam43aQ8BUP8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Fam43aQ8BUP8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Fam43aQ8BUP8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Fam43aQ8BUP8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Fam43aQ8BUP8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Fam43aQ8BUP8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Fam43aQ8BUP8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Fam43aQ8BUP8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Fam43aQ8BUP8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Fam43aQ8BUP8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Fam43aQ8BUP8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Fam43aQ8BUP8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Fam43aQ8BUP8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Fam43aQ8BUP8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Fam43aQ8BUP8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.09■■■□□ 2.73
Fam43aQ8BUP8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Fam43aQ8BUP8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Fam43aQ8BUP8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Fam43aQ8BUP8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Fam43aQ8BUP8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Fam43aQ8BUP8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Fam43aQ8BUP8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.83■■■□□ 2.69
Fam43aQ8BUP8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Fam43aQ8BUP8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Fam43aQ8BUP8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.66■■■□□ 2.66
Fam43aQ8BUP8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Fam43aQ8BUP8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Fam43aQ8BUP8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.39■■■□□ 2.62
Fam43aQ8BUP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Fam43aQ8BUP8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Fam43aQ8BUP8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Fam43aQ8BUP8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Fam43aQ8BUP8 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.28■■■□□ 2.6
Fam43aQ8BUP8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Fam43aQ8BUP8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Fam43aQ8BUP8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Fam43aQ8BUP8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Fam43aQ8BUP8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.03■■■□□ 2.56
Fam43aQ8BUP8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
Fam43aQ8BUP8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Fam43aQ8BUP8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Fam43aQ8BUP8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.97■■■□□ 2.55
Fam43aQ8BUP8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Fam43aQ8BUP8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.92■■■□□ 2.54
Fam43aQ8BUP8 Gm25238-201ENSMUST00000174914 89 ntBASIC30.9■■■□□ 2.54
Fam43aQ8BUP8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Fam43aQ8BUP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
Fam43aQ8BUP8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Fam43aQ8BUP8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Fam43aQ8BUP8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Fam43aQ8BUP8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.71■■■□□ 2.51
Fam43aQ8BUP8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Fam43aQ8BUP8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Fam43aQ8BUP8 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.6■■■□□ 2.49
Fam43aQ8BUP8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Fam43aQ8BUP8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Fam43aQ8BUP8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Fam43aQ8BUP8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Fam43aQ8BUP8 Gm27325-201ENSMUST00000175467 74 ntBASIC30.41■■■□□ 2.46
Fam43aQ8BUP8 Zxda-201ENSMUST00000117281 2621 ntBASIC30.39■■■□□ 2.45
Fam43aQ8BUP8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Fam43aQ8BUP8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.33■■■□□ 2.45
Fam43aQ8BUP8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.32■■■□□ 2.44
Fam43aQ8BUP8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Fam43aQ8BUP8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Fam43aQ8BUP8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.26■■■□□ 2.43
Fam43aQ8BUP8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Fam43aQ8BUP8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.24■■■□□ 2.43
Fam43aQ8BUP8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.18■■■□□ 2.42
Fam43aQ8BUP8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
Fam43aQ8BUP8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Fam43aQ8BUP8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Fam43aQ8BUP8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Fam43aQ8BUP8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.13■■■□□ 2.41
Fam43aQ8BUP8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Fam43aQ8BUP8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Fam43aQ8BUP8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Fam43aQ8BUP8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Fam43aQ8BUP8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Fam43aQ8BUP8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms