RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Eif4a2P10630 407 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Q3TQI7 289 aaKnown RBP8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 4930572O03RikQ8C5Y0 211 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Gemin5Q8BX17 1502 aaKnown RBP8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Elp1Q7TT37 1333 aaKnown RBP8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Zfp777B9EKF4 885 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ccdc85cE9Q6B2 420 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Taok3Q8BYC6 898 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Slit3Q9WVB4 1523 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 TnikP83510 1323 aa8.95□□□□□ -0.98
Bdnf-201ENSMUST00000053317 PplQ9R269 1755 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ythdc1E9Q5K9 736 aaKnown RBP8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Smg7Q5RJH6 1138 aaKnown RBP8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ggnbp2Q5SV77 696 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ncoa4Q5U4H9 625 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Slc5a1Q8C3K6 665 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Gli3Q61602 1583 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ccnl1Q52KE7 532 aaKnown RBP8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Gsdma3Q5Y4Y6 464 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ankrd13dQ6PD24 605 aa8.94□□□□□ -0.98
Bdnf-201ENSMUST00000053317 TmpoQ61033 693 aaKnown RBP8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Snap23O09044 210 aa8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 ArxO35085 564 aa8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Calr4Q3TQS0 420 aa8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Kdm2bQ6P1G2 1309 aa8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 FancaQ9JL70 1439 aa8.93□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Zmym3Q9JLM4 1370 aa8.92□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Klc3Q91W40 508 aa8.92□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Zc3h13E9Q784 1729 aaKnown RBP8.92□□□□□ -0.98
Bdnf-201ENSMUST00000053317 PtpruB1AUH1 1446 aa8.92□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Lmod3E9QA62 571 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Astn2Q80Z10 1352 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ofd1Q80Z25 1017 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 ThemisQ8BGW0 636 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Hsp90aa1P07901 733 aaKnown RBP8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Tmco5bQ80X59 307 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Nwd1A6H603 1563 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Ppp1r15aP17564 657 aa8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Eif3bQ8JZQ9 803 aaKnown RBP8.91□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Rab3gap2Q8BMG7 1366 aa8.9□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Adgrl1Q80TR1 1466 aa8.9□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Plxnc1Q9QZC2 1574 aa8.9□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Sik1Q60670 779 aa8.9□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ankrd23Q812A3 306 aa8.9□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Cep152A2AUM9 1736 aaKnown RBP8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ppfibp2O35711 882 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Fkbp4P30416 458 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 C3P01027 1663 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Cntnap1O54991 1385 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Cnnm1Q0GA42 951 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Rsph6aQ8CDR2 708 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Col14a1Q80X19 1797 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ncapd2Q8K2Z4 1392 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ksr2Q3UVC0 959 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Znf335A2A5K6 1337 aa8.89□□□□□ -0.99
Bdnf-201ENSMUST00000053317 SafbD3YXK2 937 aaKnown RBP8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Msl1Q6PDM1 616 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Larp1Q6ZQ58 1072 aaKnown RBP8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Kif21bQ9QXL1 1668 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Pard3Q99NH2 1333 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Clcn1Q64347 994 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Strn4P58404 760 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Eif2ak4Q9QZ05 1648 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Znf330Q922H9 316 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Nid2O88322 1403 aa8.88□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Smg6P61406 1418 aaKnown RBP8.87□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ccdc9Q8VC31 543 aaKnown RBP8.87□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Gm16486A0A1D5RMD1 1434 aa8.87□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Miga2Q8BK03 593 aa8.87□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Abcc10Q8R4P9 1501 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Pola1P33609 1465 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Phlpp1Q8CHE4 1687 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Dusp27Q148W8 1138 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Ginm1Q91WR6 327 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Usp16Q99LG0 825 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Uhrf1bp1lA2RSJ4 1457 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 TnrQ8BYI9 1358 aa8.86□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Btbd11Q6GQW0 1109 aa8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Mak16Q8BGS0 296 aaKnown RBP8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Zcrb1Q9CZ96 217 aaKnown RBP8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Hoxb7P09024 217 aa8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Wdr43Q6ZQL4 677 aaKnown RBP8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Klhdc4Q921I2 584 aa8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Cps1Q8C196 1500 aa8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 OscarQ8VBT3 265 aa8.85□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Iqsec2Q5DU25 1478 aa8.84□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Atxn3Q9CVD2 355 aa8.84□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Swt1Q9DBQ9 907 aa8.84□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Prim1P20664 417 aa8.84□□□□□ -0.99
Bdnf-201ENSMUST00000053317 Slc4a2P13808 1237 aaKnown RBP8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 GalcP54818 684 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Irx3P81067 507 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Pim2Q62070 370 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Nectin2P32507 530 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Jmjd4Q8BFT6 427 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Smarcc1P97496 1104 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Znf428Q8C1M2 176 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Rab11fip3Q8CHD8 1047 aa8.83□□□□□ -1
Bdnf-201ENSMUST00000053317 Aplp1Q03157 653 aa8.82□□□□□ -1
Bdnf-201ENSMUST00000053317 Ift172Q6VH22 1749 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms