RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 NischQ80TM9 1593 aa13.81□□□□□ -0.2
Bdnf-201ENSMUST00000053317 Abcc9P70170 1546 aa13.33□□□□□ -0.28
Bdnf-201ENSMUST00000053317 Rhox8Q6VSS7 320 aa13.29□□□□□ -0.28
Bdnf-201ENSMUST00000053317 Gm35339A0A140LHH9 1649 aa13.17□□□□□ -0.3
Bdnf-201ENSMUST00000053317 Abcc8B2RUS7 1588 aa13.11□□□□□ -0.31
Bdnf-201ENSMUST00000053317 ScribQ80U72 1612 aa12.43□□□□□ -0.42
Bdnf-201ENSMUST00000053317 Ccdc136Q3TVA9 1136 aa12.31□□□□□ -0.44
Bdnf-201ENSMUST00000053317 NacadQ5SWP3 1504 aa12.3□□□□□ -0.44
Bdnf-201ENSMUST00000053317 Kdm5dQ62240 1548 aa12.27□□□□□ -0.44
Bdnf-201ENSMUST00000053317 Zcchc6Q5BLK4 1491 aaKnown RBP12.18□□□□□ -0.46
Bdnf-201ENSMUST00000053317 Esf1Q3V1V3 845 aaKnown RBP12.08□□□□□ -0.48
Bdnf-201ENSMUST00000053317 Rb1cc1Q9ESK9 1588 aa12.04□□□□□ -0.48
Bdnf-201ENSMUST00000053317 Sycp2Q9CUU3 1500 aa11.98□□□□□ -0.49
Bdnf-201ENSMUST00000053317 Dnajc5bQ9CQ94 199 aa11.88□□□□□ -0.51
Bdnf-201ENSMUST00000053317 Cngb1E1AZ71 1325 aa11.86□□□□□ -0.51
Bdnf-201ENSMUST00000053317 Dcaf1Q80TR8 1506 aa11.84□□□□□ -0.51
Bdnf-201ENSMUST00000053317 Trim41Q5NCC3 630 aa11.8□□□□□ -0.52
Bdnf-201ENSMUST00000053317 Baz1aO88379 1555 aa11.77□□□□□ -0.52
Bdnf-201ENSMUST00000053317 Il27Q8K3I6 234 aa11.75□□□□□ -0.53
Bdnf-201ENSMUST00000053317 Ubl4bQ9CQ84 188 aa11.72□□□□□ -0.53
Bdnf-201ENSMUST00000053317 BicraF8VPZ9 1578 aa11.69□□□□□ -0.54
Bdnf-201ENSMUST00000053317 Pds5bQ4VA53 1446 aaKnown RBP11.67□□□□□ -0.54
Bdnf-201ENSMUST00000053317 Cecr2E9Q2Z1 1453 aa11.59□□□□□ -0.55
Bdnf-201ENSMUST00000053317 Ercc6F8VPZ5 1481 aa11.55□□□□□ -0.56
Bdnf-201ENSMUST00000053317 Atad2bE9Q166 1460 aaKnown RBP11.51□□□□□ -0.57
Bdnf-201ENSMUST00000053317 Npm1Q61937 292 aaKnown RBP11.5□□□□□ -0.57
Bdnf-201ENSMUST00000053317 Zeb1Q64318 1117 aa11.48□□□□□ -0.57
Bdnf-201ENSMUST00000053317 Gab3Q8BSM5 595 aa11.47□□□□□ -0.57
Bdnf-201ENSMUST00000053317 Crybg2B7ZCC2 1516 aa11.47□□□□□ -0.57
Bdnf-201ENSMUST00000053317 Brd4Q9ESU6 1400 aaKnown RBP11.45□□□□□ -0.58
Bdnf-201ENSMUST00000053317 Npm2Q80W85 207 aa11.37□□□□□ -0.59
Bdnf-201ENSMUST00000053317 Smarca4Q3TKT4 1613 aaKnown RBP11.36□□□□□ -0.59
Bdnf-201ENSMUST00000053317 Ccdc180J3QNE4 1664 aa11.35□□□□□ -0.59
Bdnf-201ENSMUST00000053317 Kif15Q6P9L6 1387 aa11.34□□□□□ -0.59
Bdnf-201ENSMUST00000053317 Phldb1Q6PDH0 1371 aaKnown RBP11.34□□□□□ -0.59
Bdnf-201ENSMUST00000053317 Iqgap2Q3UQ44 1575 aa11.33□□□□□ -0.6
Bdnf-201ENSMUST00000053317 Smarca2Q6DIC0 1577 aa11.33□□□□□ -0.6
Bdnf-201ENSMUST00000053317 Myt1lP97500 1187 aa11.29□□□□□ -0.6
Bdnf-201ENSMUST00000053317 CftrP26361 1476 aa11.28□□□□□ -0.6
Bdnf-201ENSMUST00000053317 Cc2d2aQ8CFW7 1633 aa11.27□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Rsf1E9PWW9 1441 aaKnown RBP11.24□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Frmpd1A2AKB4 1549 aa11.24□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Synj1Q8CHC4 1574 aa11.22□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Pelp1Q9DBD5 1123 aaKnown RBP11.21□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Rtl1Q7M732 1744 aa11.21□□□□□ -0.61
Bdnf-201ENSMUST00000053317 Chic1Q8CBW7 227 aa11.18□□□□□ -0.62
Bdnf-201ENSMUST00000053317 Cux2P70298 1426 aa11.18□□□□□ -0.62
Bdnf-201ENSMUST00000053317 Wdr62Q3U3T8 1523 aa11.11□□□□□ -0.63
Bdnf-201ENSMUST00000053317 Ifnlr1Q8CGK5 535 aa11.11□□□□□ -0.63
Bdnf-201ENSMUST00000053317 Thoc2B1AZI6 1594 aaKnown RBP11.1□□□□□ -0.63
Bdnf-201ENSMUST00000053317 Golga3P55937 1487 aa11.06□□□□□ -0.64
Bdnf-201ENSMUST00000053317 Cttnbp2B9EJA2 1648 aa11.06□□□□□ -0.64
Bdnf-201ENSMUST00000053317 Cep164Q5DU05 1446 aa11.05□□□□□ -0.64
Bdnf-201ENSMUST00000053317 Mrc2Q64449 1479 aa11.04□□□□□ -0.64
Bdnf-201ENSMUST00000053317 Fkbp15Q6P9Q6 1216 aaKnown RBP11.02□□□□□ -0.64
Bdnf-201ENSMUST00000053317 Ccdc18Q640L5 1455 aa11.01□□□□□ -0.65
Bdnf-201ENSMUST00000053317 Ap3b1Q9Z1T1 1105 aa10.99□□□□□ -0.65
Bdnf-201ENSMUST00000053317 Ttbk1Q6PCN3 1308 aa10.95□□□□□ -0.66
Bdnf-201ENSMUST00000053317 Dhx29Q6PGC1 1365 aaKnown RBP10.94□□□□□ -0.66
Bdnf-201ENSMUST00000053317 Ehmt2Q9Z148 1263 aaKnown RBP10.94□□□□□ -0.66
Bdnf-201ENSMUST00000053317 Fam135aQ6NS59 1506 aa10.94□□□□□ -0.66
Bdnf-201ENSMUST00000053317 Plppr3Q7TPB0 716 aa10.91□□□□□ -0.66
Bdnf-201ENSMUST00000053317 LrpprcQ6PB66 1392 aaKnown RBP10.91□□□□□ -0.66
Bdnf-201ENSMUST00000053317 Ccdc88bQ4QRL3 1481 aa10.91□□□□□ -0.66
Bdnf-201ENSMUST00000053317 HrcG5E8J6 738 aa10.88□□□□□ -0.67
Bdnf-201ENSMUST00000053317 Urb2E9Q7L1 1524 aaKnown RBP10.86□□□□□ -0.67
Bdnf-201ENSMUST00000053317 Arhgap27A2AB59 869 aa10.86□□□□□ -0.67
Bdnf-201ENSMUST00000053317 Pabpn1Q8CCS6 302 aaKnown RBP10.83□□□□□ -0.68
Bdnf-201ENSMUST00000053317 Fmn1Q05860 1466 aa10.82□□□□□ -0.68
Bdnf-201ENSMUST00000053317 Plb1Q3TTY0 1478 aa10.8□□□□□ -0.68
Bdnf-201ENSMUST00000053317 Lmod2Q3UHZ5 550 aa10.79□□□□□ -0.68
Bdnf-201ENSMUST00000053317 AknaQ80VW7 1404 aa10.78□□□□□ -0.68
Bdnf-201ENSMUST00000053317 Rad54l2Q99NG0 1466 aa10.73□□□□□ -0.69
Bdnf-201ENSMUST00000053317 Rpgrip1Q9EPQ2 1331 aa10.72□□□□□ -0.69
Bdnf-201ENSMUST00000053317 Duox2A2AQ99 1517 aa10.71□□□□□ -0.69
Bdnf-201ENSMUST00000053317 Lamc3Q9R0B6 1581 aa10.7□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Arid3cA6PWV5 409 aa10.7□□□□□ -0.7
Bdnf-201ENSMUST00000053317 PogzQ8BZH4 1409 aaKnown RBP10.69□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Unc13aQ4KUS2 1712 aa10.69□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Baz1bQ9Z277 1479 aa10.68□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Kif21aQ9QXL2 1672 aa10.67□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Ube2uB1AUC4 352 aa10.66□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Ppp1r18Q8BQ30 594 aa10.66□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Plekhg3Q4VAC9 1341 aa10.65□□□□□ -0.7
Bdnf-201ENSMUST00000053317 Camsap1A2AHC3 1581 aa10.64□□□□□ -0.71
Bdnf-201ENSMUST00000053317 UbtfP25976 765 aaKnown RBP10.64□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Crocc2F6XLV1 1638 aa10.61□□□□□ -0.71
Bdnf-201ENSMUST00000053317 PtprkP35822 1457 aa10.61□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Rpap1Q80TE0 1409 aa10.61□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Grin2bQ01097 1482 aa10.61□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Zbtb7cQ8VCZ7 619 aa10.61□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Efcab5A0JP43 1406 aa10.6□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Lrriq1Q0P5X1 1673 aa10.6□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Top2bQ64511 1612 aa10.59□□□□□ -0.71
Bdnf-201ENSMUST00000053317 Clip1Q922J3 1391 aa10.57□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Ift140E9PY46 1464 aa10.56□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Rapgef2Q8CHG7 1496 aa10.55□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Las1lA2BE28 776 aaKnown RBP10.55□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Dnajc5P60904 198 aa10.54□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Soga1E1U8D0 1418 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 246.2 ms