RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YPL225WQ08971 146 aaKnown RBP6.05□□□□□ -1.44
SPG4YMR107W COX6P00427 148 aa6.04□□□□□ -1.44
SPG4YMR107W RAD3P06839 778 aa6.04□□□□□ -1.44
SPG4YMR107W VAS1P07806 1104 aaKnown RBP6.04□□□□□ -1.44
SPG4YMR107W GSY2P27472 705 aa6.04□□□□□ -1.44
SPG4YMR107W RFC5P38251 354 aa6.04□□□□□ -1.44
SPG4YMR107W MAM1P40065 302 aa6.04□□□□□ -1.44
SPG4YMR107W YPT11P48559 417 aa6.04□□□□□ -1.44
SPG4YMR107W CTF18P49956 741 aa6.04□□□□□ -1.44
SPG4YMR107W YGL242CP53066 181 aa6.04□□□□□ -1.44
SPG4YMR107W NMA111P53920 997 aa6.04□□□□□ -1.44
SPG4YMR107W RIM20Q12033 661 aa6.04□□□□□ -1.44
SPG4YMR107W ATG9Q12142 997 aa6.04□□□□□ -1.44
SPG4YMR107W SEC39Q12745 709 aa6.04□□□□□ -1.44
SPG4YMR107W RRP5Q05022 1729 aaKnown RBP6.03□□□□□ -1.44
SPG4YMR107W COQ4O13525 335 aa6.03□□□□□ -1.44
SPG4YMR107W UBC1P21734 215 aaKnown RBP6.03□□□□□ -1.44
SPG4YMR107W MAL33P38157 468 aa6.03□□□□□ -1.44
SPG4YMR107W MRPS35P53292 345 aa6.03□□□□□ -1.44
SPG4YMR107W BOP3P53958 396 aa6.03□□□□□ -1.44
SPG4YMR107W NOP8Q08287 484 aaPredicted RBP6.03□□□□□ -1.44
SPG4YMR107W YOR223WQ12015 292 aa6.03□□□□□ -1.44
SPG4YMR107W YIL177CP40434 1758 aa6.03□□□□□ -1.44
SPG4YMR107W YJL225CP40889 1758 aa6.03□□□□□ -1.44
SPG4YMR107W SPT5P27692 1063 aaKnown RBP6.02□□□□□ -1.45
SPG4YMR107W RFT1P38206 574 aaPredicted RBP6.02□□□□□ -1.45
SPG4YMR107W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SPG4YMR107W ZDS1P50111 915 aaKnown RBP6.02□□□□□ -1.45
SPG4YMR107W HOT1Q03213 719 aa6.02□□□□□ -1.45
SPG4YMR107W SGD1Q06132 899 aa6.02□□□□□ -1.45
SPG4YMR107W YDR306CQ06640 478 aa6.02□□□□□ -1.45
SPG4YMR107W URB1P34241 1764 aaKnown RBP6.01□□□□□ -1.45
SPG4YMR107W RPP1BP10622 106 aaKnown RBP6.01□□□□□ -1.45
SPG4YMR107W HSP104P31539 908 aaKnown RBP6.01□□□□□ -1.45
SPG4YMR107W SPT23P35210 1082 aa6.01□□□□□ -1.45
SPG4YMR107W YER130CP39959 443 aa6.01□□□□□ -1.45
SPG4YMR107W BOI2P39969 1040 aa6.01□□□□□ -1.45
SPG4YMR107W VTC3Q02725 835 aa6.01□□□□□ -1.45
SPG4YMR107W YDR338CQ05497 695 aa6.01□□□□□ -1.45
SPG4YMR107W ORM2Q06144 216 aa6.01□□□□□ -1.45
SPG4YMR107W SPT2P06843 333 aaPredicted RBP6□□□□□ -1.45
SPG4YMR107W MCM4P30665 933 aaKnown RBP6□□□□□ -1.45
SPG4YMR107W HUL4P40985 892 aa6□□□□□ -1.45
SPG4YMR107W YJR142WP47173 342 aa6□□□□□ -1.45
SPG4YMR107W CAF130P53280 1122 aaPredicted RBP6□□□□□ -1.45
SPG4YMR107W MAL13P53338 473 aa6□□□□□ -1.45
SPG4YMR107W BNI4P53858 892 aa6□□□□□ -1.45
SPG4YMR107W ARP5P53946 755 aa6□□□□□ -1.45
SPG4YMR107W RRB1Q04225 511 aaKnown RBP6□□□□□ -1.45
SPG4YMR107W YLR407WQ06070 228 aa6□□□□□ -1.45
SPG4YMR107W TMA16Q08687 178 aa6□□□□□ -1.45
SPG4YMR107W ISU2Q12056 156 aa6□□□□□ -1.45
SPG4YMR107W RMP1Q12530 201 aa6□□□□□ -1.45
SPG4YMR107W PHO13P19881 312 aa5.99□□□□□ -1.45
SPG4YMR107W DPB3P27344 201 aa5.99□□□□□ -1.45
SPG4YMR107W CPS1P27614 576 aa5.99□□□□□ -1.45
SPG4YMR107W RAD16P31244 790 aa5.99□□□□□ -1.45
SPG4YMR107W SWC3P31376 625 aa5.99□□□□□ -1.45
SPG4YMR107W ECM32P32644 1121 aaKnown RBP5.99□□□□□ -1.45
SPG4YMR107W RRP1P35178 278 aaPredicted RBP5.99□□□□□ -1.45
SPG4YMR107W ECM21P38167 1117 aaKnown RBP5.99□□□□□ -1.45
SPG4YMR107W DSF2P38213 736 aa5.99□□□□□ -1.45
SPG4YMR107W ORC6P38826 435 aa5.99□□□□□ -1.45
SPG4YMR107W VPS8P39702 1274 aa5.99□□□□□ -1.45
SPG4YMR107W HGH1P48362 394 aaKnown RBP5.99□□□□□ -1.45
SPG4YMR107W TAN1P53072 289 aaPredicted RBP5.99□□□□□ -1.45
SPG4YMR107W PIB2P53191 635 aa5.99□□□□□ -1.45
SPG4YMR107W PLP2Q12017 286 aa5.99□□□□□ -1.45
SPG4YMR107W ELG1Q12050 791 aa5.99□□□□□ -1.45
SPG4YMR107W PRP16P15938 1071 aaPredicted RBP5.98□□□□□ -1.45
SPG4YMR107W RPO26P20435 155 aa5.98□□□□□ -1.45
SPG4YMR107W SEC14P24280 304 aaKnown RBP5.98□□□□□ -1.45
SPG4YMR107W BCK2P33306 851 aa5.98□□□□□ -1.45
SPG4YMR107W TPS3P38426 1054 aaKnown RBP5.98□□□□□ -1.45
SPG4YMR107W MTR4P47047 1073 aaKnown RBP5.98□□□□□ -1.45
SPG4YMR107W YJR079WP47126 109 aa5.98□□□□□ -1.45
SPG4YMR107W ALO1P54783 526 aaKnown RBP5.98□□□□□ -1.45
SPG4YMR107W CUS1Q02554 436 aaPredicted RBP5.98□□□□□ -1.45
SPG4YMR107W MAM3Q12296 706 aa5.98□□□□□ -1.45
SPG4YMR107W PET123P17558 318 aa5.97□□□□□ -1.45
SPG4YMR107W PDB1P32473 366 aaKnown RBP5.97□□□□□ -1.45
SPG4YMR107W YBR287WP38355 427 aa5.97□□□□□ -1.45
SPG4YMR107W PXR1P53335 271 aaPredicted RBP5.97□□□□□ -1.45
SPG4YMR107W VPS75P53853 264 aa5.97□□□□□ -1.45
SPG4YMR107W ALF1P53904 254 aa5.97□□□□□ -1.45
SPG4YMR107W NCS2P53923 493 aaPredicted RBP5.97□□□□□ -1.45
SPG4YMR107W YOL057WQ08225 711 aa5.97□□□□□ -1.45
SPG4YMR107W PUS1Q12211 544 aaKnown RBP5.97□□□□□ -1.45
SPG4YMR107W GAP1P19145 602 aaPredicted RBP5.96□□□□□ -1.46
SPG4YMR107W SHM1P37292 490 aaPredicted RBP5.96□□□□□ -1.46
SPG4YMR107W OLA1P38219 394 aaKnown RBP5.96□□□□□ -1.46
SPG4YMR107W YSW1P38280 609 aa5.96□□□□□ -1.46
SPG4YMR107W RRM3P38766 723 aa5.96□□□□□ -1.46
SPG4YMR107W CCT4P39078 528 aaKnown RBP5.96□□□□□ -1.46
SPG4YMR107W PTC2P39966 464 aaKnown RBP5.96□□□□□ -1.46
SPG4YMR107W IES2P40154 320 aa5.96□□□□□ -1.46
SPG4YMR107W RIO2P40160 425 aaKnown RBP5.96□□□□□ -1.46
SPG4YMR107W SEC9P40357 651 aa5.96□□□□□ -1.46
SPG4YMR107W SPO22P40511 975 aa5.96□□□□□ -1.46
SPG4YMR107W ALD2P47771 506 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms