RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W PEA2P40091 420 aa8.1□□□□□ -1.11
APE4YHR113W KRI1P42846 591 aaKnown RBP8.1□□□□□ -1.11
APE4YHR113W IOC3P43596 787 aa8.1□□□□□ -1.11
APE4YHR113W MTC3P53077 123 aa8.1□□□□□ -1.11
APE4YHR113W NSG2P53898 299 aa8.1□□□□□ -1.11
APE4YHR113W KAR5Q04746 504 aa8.1□□□□□ -1.11
APE4YHR113W MRD1Q06106 887 aaKnown RBP8.1□□□□□ -1.11
APE4YHR113W TAH18Q12181 623 aa8.1□□□□□ -1.11
APE4YHR113W TPM1P17536 199 aaKnown RBP8.09□□□□□ -1.11
APE4YHR113W DLD1P32891 587 aa8.09□□□□□ -1.11
APE4YHR113W AAP1P37898 856 aaKnown RBP8.09□□□□□ -1.11
APE4YHR113W UTP7P40055 554 aaKnown RBP8.09□□□□□ -1.11
APE4YHR113W GCR2Q01722 534 aa8.09□□□□□ -1.11
APE4YHR113W YPL260WQ08977 551 aa8.09□□□□□ -1.11
APE4YHR113W LAM4P38800 1345 aa8.08□□□□□ -1.12
APE4YHR113W OPI1P21957 404 aa8.08□□□□□ -1.12
APE4YHR113W ADP1P25371 1049 aa8.08□□□□□ -1.12
APE4YHR113W MET1P36150 593 aa8.08□□□□□ -1.12
APE4YHR113W NOP2P40991 618 aaKnown RBP8.08□□□□□ -1.12
APE4YHR113W HXT17P53631 564 aa8.08□□□□□ -1.12
APE4YHR113W CWC15Q03772 175 aaKnown RBP8.08□□□□□ -1.12
APE4YHR113W KEL3Q08979 651 aaPredicted RBP8.08□□□□□ -1.12
APE4YHR113W PMA1P05030 918 aaKnown RBP8.07□□□□□ -1.12
APE4YHR113W HXT13P39924 564 aa8.07□□□□□ -1.12
APE4YHR113W NIT1P40447 199 aa8.07□□□□□ -1.12
APE4YHR113W GSC2P40989 1895 aa8.07□□□□□ -1.12
APE4YHR113W NPL4P33755 580 aa8.06□□□□□ -1.12
APE4YHR113W YBL028CP38202 106 aa8.06□□□□□ -1.12
APE4YHR113W YJL171CP46992 396 aa8.06□□□□□ -1.12
APE4YHR113W UFD2P54860 961 aa8.06□□□□□ -1.12
APE4YHR113W PKH3Q03306 898 aaPredicted RBP8.06□□□□□ -1.12
APE4YHR113W PPM2Q08282 695 aa8.06□□□□□ -1.12
APE4YHR113W GAL2P13181 574 aa8.06□□□□□ -1.12
APE4YHR113W COQ1P18900 473 aa8.06□□□□□ -1.12
APE4YHR113W IMP2'P32351 346 aa8.06□□□□□ -1.12
APE4YHR113W CIC1P38779 376 aaKnown RBP8.06□□□□□ -1.12
APE4YHR113W YIL089WP40500 205 aa8.06□□□□□ -1.12
APE4YHR113W ESF1Q06344 628 aaKnown RBP8.06□□□□□ -1.12
APE4YHR113W SSF2Q12153 453 aaPredicted RBP8.06□□□□□ -1.12
APE4YHR113W PGA3Q12746 312 aaKnown RBP8.06□□□□□ -1.12
APE4YHR113W RTS1P38903 757 aa8.05□□□□□ -1.12
APE4YHR113W VID27P40157 782 aa8.05□□□□□ -1.12
APE4YHR113W YDL124WQ07551 312 aaKnown RBP8.05□□□□□ -1.12
APE4YHR113W PCL8Q08966 492 aa8.05□□□□□ -1.12
APE4YHR113W CHO2P05374 869 aaKnown RBP8.04□□□□□ -1.12
APE4YHR113W RAD53P22216 821 aa8.04□□□□□ -1.12
APE4YHR113W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
APE4YHR113W TPS3P38426 1054 aaKnown RBP8.04□□□□□ -1.12
APE4YHR113W YHL050CP38721 697 aa8.04□□□□□ -1.12
APE4YHR113W KEL1P38853 1164 aaKnown RBP8.04□□□□□ -1.12
APE4YHR113W PNT1P38969 423 aa8.04□□□□□ -1.12
APE4YHR113W MSH4P40965 878 aaPredicted RBP8.04□□□□□ -1.12
APE4YHR113W PEX29Q03370 554 aa8.04□□□□□ -1.12
APE4YHR113W CSR2Q12734 1121 aa8.04□□□□□ -1.12
APE4YHR113W SIS2P36024 562 aa8.03□□□□□ -1.12
APE4YHR113W SNU71P53207 620 aaKnown RBP8.03□□□□□ -1.12
APE4YHR113W TUB2P02557 457 aaKnown RBP8.02□□□□□ -1.13
APE4YHR113W MPH3P0CE00 602 aa8.02□□□□□ -1.13
APE4YHR113W PFK2P16862 959 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
APE4YHR113W CST26P38226 397 aa8.02□□□□□ -1.13
APE4YHR113W VPS8P39702 1274 aa8.02□□□□□ -1.13
APE4YHR113W RPS15Q01855 142 aaKnown RBP8.02□□□□□ -1.13
APE4YHR113W GIN4Q12263 1142 aa8.02□□□□□ -1.13
APE4YHR113W RAD61Q99359 647 aa8.02□□□□□ -1.13
APE4YHR113W RIT1P23796 513 aa8.01□□□□□ -1.13
APE4YHR113W RRT6P53117 311 aaPredicted RBP8.01□□□□□ -1.13
APE4YHR113W SPN1Q06505 410 aaPredicted RBP8.01□□□□□ -1.13
APE4YHR113W SRM1P21827 482 aa8□□□□□ -1.13
APE4YHR113W PRE8P23639 250 aa8□□□□□ -1.13
APE4YHR113W PEP3P27801 918 aa8□□□□□ -1.13
APE4YHR113W ACA1P39970 489 aa8□□□□□ -1.13
APE4YHR113W ARP5P53946 755 aa8□□□□□ -1.13
APE4YHR113W LAP2Q10740 671 aa8□□□□□ -1.13
APE4YHR113W KIN1P13185 1064 aa8□□□□□ -1.13
APE4YHR113W PRO3P32263 286 aaKnown RBP8□□□□□ -1.13
APE4YHR113W ANP1P32629 500 aa8□□□□□ -1.13
APE4YHR113W RER2P35196 286 aa8□□□□□ -1.13
APE4YHR113W CRG1P38892 291 aaRIP-Chip data8□□□□□ -1.13not detected
APE4YHR113W RRD1P40454 393 aaKnown RBP8□□□□□ -1.13
APE4YHR113W RNR2P09938 399 aaKnown RBP7.99□□□□□ -1.13
APE4YHR113W ACE2P21192 770 aa7.99□□□□□ -1.13
APE4YHR113W VID28P40547 921 aa7.99□□□□□ -1.13
APE4YHR113W RLF2Q12495 606 aa7.99□□□□□ -1.13
APE4YHR113W PCS60P38137 543 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
APE4YHR113W EST2Q06163 884 aa7.98□□□□□ -1.13
APE4YHR113W CHS3P29465 1165 aa7.97□□□□□ -1.13
APE4YHR113W MYO3P36006 1272 aa7.97□□□□□ -1.13
APE4YHR113W BSD2P38356 321 aa7.97□□□□□ -1.13
APE4YHR113W AIM9P40053 627 aaKnown RBP7.97□□□□□ -1.13
APE4YHR113W SPO22P40511 975 aa7.97□□□□□ -1.13
APE4YHR113W UBP10P53874 792 aaPredicted RBP7.97□□□□□ -1.13
APE4YHR113W HDA1P53973 706 aa7.97□□□□□ -1.13
APE4YHR113W TYW1Q08960 810 aaKnown RBP7.97□□□□□ -1.13
APE4YHR113W KRS1P15180 591 aaKnown RBP7.96□□□□□ -1.13
APE4YHR113W VPS30Q02948 557 aa7.96□□□□□ -1.13
APE4YHR113W TFC6Q06339 672 aa7.96□□□□□ -1.13
APE4YHR113W TRL1P09880 827 aaKnown RBP7.95□□□□□ -1.14
APE4YHR113W SAM2P19358 384 aaKnown RBP7.95□□□□□ -1.14
APE4YHR113W MRM1P25270 412 aa7.95□□□□□ -1.14
APE4YHR113W RPL8BP29453 256 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms