RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W BRN1P38170 754 aa8□□□□□ -1.13
NUP49YGL172W EMP47P43555 445 aa8□□□□□ -1.13
NUP49YGL172W IRC8P47046 822 aa8□□□□□ -1.13
NUP49YGL172W ENP2P48234 707 aaKnown RBP8□□□□□ -1.13
NUP49YGL172W MTC3P53077 123 aa8□□□□□ -1.13
NUP49YGL172W CBP1P07252 654 aa7.99□□□□□ -1.13
NUP49YGL172W RPC31P17890 251 aa7.99□□□□□ -1.13
NUP49YGL172W DSF2P38213 736 aa7.99□□□□□ -1.13
NUP49YGL172W VHR2P40041 505 aa7.99□□□□□ -1.13
NUP49YGL172W UTP7P40055 554 aaKnown RBP7.99□□□□□ -1.13
NUP49YGL172W PIP2P52960 996 aa7.99□□□□□ -1.13
NUP49YGL172W NSG2P53898 299 aa7.99□□□□□ -1.13
NUP49YGL172W FPR4Q06205 392 aaPredicted RBP7.99□□□□□ -1.13
NUP49YGL172W KIN1P13185 1064 aa7.98□□□□□ -1.13
NUP49YGL172W YJL171CP46992 396 aa7.98□□□□□ -1.13
NUP49YGL172W BBC1P47068 1157 aa7.98□□□□□ -1.13
NUP49YGL172W KAR5Q04746 504 aa7.98□□□□□ -1.13
NUP49YGL172W FLO1P32768 1537 aa7.97□□□□□ -1.13
NUP49YGL172W LAM4P38800 1345 aa7.97□□□□□ -1.13
NUP49YGL172W NPL4P33755 580 aa7.97□□□□□ -1.13
NUP49YGL172W GEF1P37020 779 aa7.97□□□□□ -1.13
NUP49YGL172W AAP1P37898 856 aaKnown RBP7.97□□□□□ -1.13
NUP49YGL172W IOC3P43596 787 aa7.97□□□□□ -1.13
NUP49YGL172W GCR2Q01722 534 aa7.97□□□□□ -1.13
NUP49YGL172W PKH3Q03306 898 aaPredicted RBP7.97□□□□□ -1.13
NUP49YGL172W TAH18Q12181 623 aa7.97□□□□□ -1.13
NUP49YGL172W OPI1P21957 404 aa7.96□□□□□ -1.13
NUP49YGL172W PEA2P40091 420 aa7.96□□□□□ -1.13
NUP49YGL172W HXT17P53631 564 aa7.96□□□□□ -1.13
NUP49YGL172W YNR021WP53723 404 aaKnown RBP7.96□□□□□ -1.13
NUP49YGL172W DLD1P32891 587 aa7.95□□□□□ -1.14
NUP49YGL172W RRP8P38961 392 aaKnown RBP7.95□□□□□ -1.14
NUP49YGL172W COQ1P18900 473 aa7.95□□□□□ -1.14
NUP49YGL172W MET1P36150 593 aa7.95□□□□□ -1.14
NUP49YGL172W HXT13P39924 564 aa7.95□□□□□ -1.14
NUP49YGL172W PPM2Q08282 695 aa7.95□□□□□ -1.14
NUP49YGL172W PBS2P08018 668 aa7.94□□□□□ -1.14
NUP49YGL172W ADP1P25371 1049 aa7.94□□□□□ -1.14
NUP49YGL172W SLN1P39928 1220 aaPredicted RBP7.94□□□□□ -1.14
NUP49YGL172W NIT1P40447 199 aa7.94□□□□□ -1.14
NUP49YGL172W NOP2P40991 618 aaKnown RBP7.94□□□□□ -1.14
NUP49YGL172W CWC15Q03772 175 aaKnown RBP7.94□□□□□ -1.14
NUP49YGL172W YPL260WQ08977 551 aa7.94□□□□□ -1.14
NUP49YGL172W KEL3Q08979 651 aaPredicted RBP7.94□□□□□ -1.14
NUP49YGL172W PMA1P05030 918 aaKnown RBP7.93□□□□□ -1.14
NUP49YGL172W MRD1Q06106 887 aaKnown RBP7.93□□□□□ -1.14
NUP49YGL172W CHO2P05374 869 aaKnown RBP7.92□□□□□ -1.14
NUP49YGL172W RAD53P22216 821 aa7.92□□□□□ -1.14
NUP49YGL172W YBL028CP38202 106 aa7.92□□□□□ -1.14
NUP49YGL172W YHL050CP38721 697 aa7.92□□□□□ -1.14
NUP49YGL172W KEL1P38853 1164 aaKnown RBP7.92□□□□□ -1.14
NUP49YGL172W YIL089WP40500 205 aa7.92□□□□□ -1.14
NUP49YGL172W PCL8Q08966 492 aa7.92□□□□□ -1.14
NUP49YGL172W GAL2P13181 574 aa7.91□□□□□ -1.14
NUP49YGL172W TPM1P17536 199 aaKnown RBP7.91□□□□□ -1.14
NUP49YGL172W RTS1P38903 757 aa7.91□□□□□ -1.14
NUP49YGL172W PNT1P38969 423 aa7.91□□□□□ -1.14
NUP49YGL172W GSC2P40989 1895 aa7.91□□□□□ -1.14
NUP49YGL172W SSF2Q12153 453 aaPredicted RBP7.91□□□□□ -1.14
NUP49YGL172W CSR2Q12734 1121 aa7.91□□□□□ -1.14
NUP49YGL172W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
NUP49YGL172W CIC1P38779 376 aaKnown RBP7.9□□□□□ -1.14
NUP49YGL172W VID27P40157 782 aa7.9□□□□□ -1.14
NUP49YGL172W MSH4P40965 878 aaPredicted RBP7.9□□□□□ -1.14
NUP49YGL172W KRI1P42846 591 aaKnown RBP7.9□□□□□ -1.14
NUP49YGL172W UFD2P54860 961 aa7.9□□□□□ -1.14
NUP49YGL172W YDL124WQ07551 312 aaKnown RBP7.9□□□□□ -1.14
NUP49YGL172W PGA3Q12746 312 aaKnown RBP7.9□□□□□ -1.14
NUP49YGL172W IMP2'P32351 346 aa7.89□□□□□ -1.15
NUP49YGL172W TPS3P38426 1054 aaKnown RBP7.89□□□□□ -1.15
NUP49YGL172W RPS15Q01855 142 aaKnown RBP7.89□□□□□ -1.15
NUP49YGL172W TUB2P02557 457 aaKnown RBP7.88□□□□□ -1.15
NUP49YGL172W PFK2P16862 959 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
NUP49YGL172W PRE8P23639 250 aa7.88□□□□□ -1.15
NUP49YGL172W SPN1Q06505 410 aaPredicted RBP7.88□□□□□ -1.15
NUP49YGL172W RAD61Q99359 647 aa7.88□□□□□ -1.15
NUP49YGL172W RER2P35196 286 aa7.87□□□□□ -1.15
NUP49YGL172W CRG1P38892 291 aaRIP-Chip data7.87□□□□□ -1.15not detected
NUP49YGL172W SNU71P53207 620 aaKnown RBP7.87□□□□□ -1.15
NUP49YGL172W ESF1Q06344 628 aaKnown RBP7.87□□□□□ -1.15
NUP49YGL172W TOM1Q03280 3268 aa7.87□□□□□ -1.15
NUP49YGL172W TRL1P09880 827 aaKnown RBP7.86□□□□□ -1.15
NUP49YGL172W MPH3P0CE00 602 aa7.86□□□□□ -1.15
NUP49YGL172W SRM1P21827 482 aa7.86□□□□□ -1.15
NUP49YGL172W PEP3P27801 918 aa7.86□□□□□ -1.15
NUP49YGL172W ANP1P32629 500 aa7.86□□□□□ -1.15
NUP49YGL172W CST26P38226 397 aa7.86□□□□□ -1.15
NUP49YGL172W VPS8P39702 1274 aa7.86□□□□□ -1.15
NUP49YGL172W UBP9P39967 754 aa7.86□□□□□ -1.15
NUP49YGL172W RRT6P53117 311 aaPredicted RBP7.86□□□□□ -1.15
NUP49YGL172W PEX29Q03370 554 aa7.86□□□□□ -1.15
NUP49YGL172W TYW1Q08960 810 aaKnown RBP7.86□□□□□ -1.15
NUP49YGL172W RIT1P23796 513 aa7.86□□□□□ -1.15
NUP49YGL172W MRM1P25270 412 aa7.86□□□□□ -1.15
NUP49YGL172W PRO3P32263 286 aaKnown RBP7.86□□□□□ -1.15
NUP49YGL172W MYO3P36006 1272 aa7.86□□□□□ -1.15
NUP49YGL172W ACA1P39970 489 aa7.86□□□□□ -1.15
NUP49YGL172W AIM9P40053 627 aaKnown RBP7.86□□□□□ -1.15
NUP49YGL172W HDA1P53973 706 aa7.86□□□□□ -1.15
NUP49YGL172W LAP2Q10740 671 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms