RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	PUS6	P53294	404 aa		10.32	□□□□□ -0.76
LSM5	YER146W	YLR407W	Q06070	228 aa		10.32	□□□□□ -0.76
LSM5	YER146W	PSK2	Q08217	1101 aa		10.32	□□□□□ -0.76
LSM5	YER146W	RPS7A	P26786	190 aa	Known RBP	10.31	□□□□□ -0.76
LSM5	YER146W	YHL017W	P38745	532 aa		10.31	□□□□□ -0.76
LSM5	YER146W	GSM1	P42950	618 aa		10.31	□□□□□ -0.76
LSM5	YER146W	FPK1	P53739	893 aa		10.31	□□□□□ -0.76
LSM5	YER146W	HAP5	Q02516	242 aa		10.31	□□□□□ -0.76
LSM5	YER146W	HRQ1	Q05549	1077 aa		10.31	□□□□□ -0.76
LSM5	YER146W	ATG20	Q07528	640 aa		10.31	□□□□□ -0.76
LSM5	YER146W	YPL150W	Q12152	901 aa		10.31	□□□□□ -0.76
LSM5	YER146W	MSP1	P28737	362 aa		10.3	□□□□□ -0.76
LSM5	YER146W	IMP2'	P32351	346 aa		10.3	□□□□□ -0.76
LSM5	YER146W	YHL050C	P38721	697 aa		10.3	□□□□□ -0.76
LSM5	YER146W	SNF7	P39929	240 aa	Known RBP	10.3	□□□□□ -0.76
LSM5	YER146W	VID28	P40547	921 aa		10.3	□□□□□ -0.76
LSM5	YER146W	HST1	P53685	503 aa		10.3	□□□□□ -0.76
LSM5	YER146W	CRF1	Q04930	467 aa		10.3	□□□□□ -0.76
LSM5	YER146W	EST2	Q06163	884 aa		10.3	□□□□□ -0.76
LSM5	YER146W	MPH3	P0CE00	602 aa		10.29	□□□□□ -0.76
LSM5	YER146W	ROX1	P25042	368 aa		10.29	□□□□□ -0.76
LSM5	YER146W	AFG2	P32794	780 aa		10.29	□□□□□ -0.76
LSM5	YER146W	TTI1	P36097	1038 aa		10.29	□□□□□ -0.76
LSM5	YER146W	RRP8	P38961	392 aa	Known RBP	10.29	□□□□□ -0.76
LSM5	YER146W	SLN1	P39928	1220 aa	Predicted RBP	10.29	□□□□□ -0.76
LSM5	YER146W	UTP7	P40055	554 aa	Known RBP	10.29	□□□□□ -0.76
LSM5	YER146W	UFD2	P54860	961 aa		10.29	□□□□□ -0.76
LSM5	YER146W	TOP1	P04786	769 aa		10.28	□□□□□ -0.76
LSM5	YER146W	BIK1	P11709	440 aa		10.28	□□□□□ -0.76
LSM5	YER146W	MSM1	P22438	575 aa		10.28	□□□□□ -0.76
LSM5	YER146W	MSH4	P40965	878 aa	Predicted RBP	10.28	□□□□□ -0.76
LSM5	YER146W	CTF18	P49956	741 aa		10.28	□□□□□ -0.76
LSM5	YER146W	YKE2	P52553	114 aa		10.28	□□□□□ -0.76
LSM5	YER146W	MTC3	P53077	123 aa		10.28	□□□□□ -0.76
LSM5	YER146W	YPL260W	Q08977	551 aa		10.28	□□□□□ -0.76
LSM5	YER146W	ELG1	Q12050	791 aa		10.28	□□□□□ -0.76
LSM5	YER146W	RAD61	Q99359	647 aa		10.28	□□□□□ -0.76
LSM5	YER146W	ANP1	P32629	500 aa		10.27	□□□□□ -0.77
LSM5	YER146W	UBP10	P53874	792 aa	Predicted RBP	10.27	□□□□□ -0.77
LSM5	YER146W	ESF1	Q06344	628 aa	Known RBP	10.27	□□□□□ -0.77
LSM5	YER146W	PCL8	Q08966	492 aa		10.27	□□□□□ -0.77
LSM5	YER146W	TSR3	Q12094	313 aa	Known RBP	10.27	□□□□□ -0.77
LSM5	YER146W	SSA1	P10591	642 aa	Known RBP	10.26	□□□□□ -0.77
LSM5	YER146W	CBP3	P21560	335 aa		10.26	□□□□□ -0.77
LSM5	YER146W	DJP1	P40564	432 aa		10.26	□□□□□ -0.77
LSM5	YER146W	ARP5	P53946	755 aa		10.26	□□□□□ -0.77
LSM5	YER146W	HDA1	P53973	706 aa		10.26	□□□□□ -0.77
LSM5	YER146W	ISW2	Q08773	1120 aa		10.26	□□□□□ -0.77
LSM5	YER146W	GLC3	P32775	704 aa		10.25	□□□□□ -0.77
LSM5	YER146W	ELM1	P32801	640 aa		10.25	□□□□□ -0.77
LSM5	YER146W	PTK2	P47116	818 aa	Known RBP	10.25	□□□□□ -0.77
LSM5	YER146W	MYO5	Q04439	1219 aa	Known RBP	10.25	□□□□□ -0.77
LSM5	YER146W	MRD1	Q06106	887 aa	Known RBP	10.25	□□□□□ -0.77
LSM5	YER146W	TFC6	Q06339	672 aa		10.25	□□□□□ -0.77
LSM5	YER146W	KEL3	Q08979	651 aa	Predicted RBP	10.25	□□□□□ -0.77
LSM5	YER146W	CPA2	P03965	1118 aa	Known RBP	10.24	□□□□□ -0.77
LSM5	YER146W	MAK31	P23059	88 aa		10.24	□□□□□ -0.77
LSM5	YER146W	MBR1	P23493	339 aa		10.24	□□□□□ -0.77
LSM5	YER146W	PRX1	P34227	261 aa	Known RBP	10.24	□□□□□ -0.77
LSM5	YER146W	VID27	P40157	782 aa		10.24	□□□□□ -0.77
LSM5	YER146W	CIR1	P42940	261 aa		10.24	□□□□□ -0.77
LSM5	YER146W	AAD16	Q02895	342 aa		10.24	□□□□□ -0.77
LSM5	YER146W	AIM44	Q99299	758 aa		10.24	□□□□□ -0.77
LSM5	YER146W	SIS2	P36024	562 aa		10.23	□□□□□ -0.77
LSM5	YER146W	TCB2	P48231	1178 aa		10.23	□□□□□ -0.77
LSM5	YER146W	YGR117C	P53270	476 aa		10.23	□□□□□ -0.77
LSM5	YER146W	SKG3	Q06315	1026 aa		10.23	□□□□□ -0.77
LSM5	YER146W	KIN1	P13185	1064 aa		10.22	□□□□□ -0.77
LSM5	YER146W	BMH2	P34730	273 aa	Known RBP	10.22	□□□□□ -0.77
LSM5	YER146W	PES4	P39684	611 aa		10.22	□□□□□ -0.77
LSM5	YER146W	SQS1	P53866	767 aa	Known RBP	10.22	□□□□□ -0.77
LSM5	YER146W	KRE33	P53914	1056 aa	Known RBP	10.22	□□□□□ -0.77
LSM5	YER146W	YLR278C	Q05854	1341 aa		10.22	□□□□□ -0.77
LSM5	YER146W	KEX1	P09620	729 aa		10.21	□□□□□ -0.77
LSM5	YER146W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	10.21	□□□□□ -0.77	not detected
LSM5	YER146W	PRE8	P23639	250 aa		10.21	□□□□□ -0.77
LSM5	YER146W	PRO3	P32263	286 aa	Known RBP	10.21	□□□□□ -0.77
LSM5	YER146W	STV1	P37296	890 aa		10.21	□□□□□ -0.77
LSM5	YER146W	MAL31	P38156	614 aa		10.21	□□□□□ -0.77
LSM5	YER146W	MAL33	P38157	468 aa		10.21	□□□□□ -0.77
LSM5	YER146W	AKR1	P39010	764 aa		10.21	□□□□□ -0.77
LSM5	YER146W	BUD6	P41697	788 aa		10.21	□□□□□ -0.77
LSM5	YER146W	ALG2	P43636	503 aa		10.21	□□□□□ -0.77
LSM5	YER146W	PEX14	P53112	341 aa		10.21	□□□□□ -0.77
LSM5	YER146W	FAR11	P53917	953 aa		10.21	□□□□□ -0.77
LSM5	YER146W	PGI1	P12709	554 aa	Known RBP	10.2	□□□□□ -0.78
LSM5	YER146W	RNR3	P21672	869 aa	Known RBP	10.2	□□□□□ -0.78
LSM5	YER146W	SRM1	P21827	482 aa		10.2	□□□□□ -0.78
LSM5	YER146W	RIT1	P23796	513 aa		10.2	□□□□□ -0.78
LSM5	YER146W	SWI4	P25302	1093 aa	Known RBP	10.2	□□□□□ -0.78
LSM5	YER146W	RPT6	Q01939	405 aa	Known RBP	10.2	□□□□□ -0.78
LSM5	YER146W	TRM44	Q02648	567 aa	Known RBP	10.2	□□□□□ -0.78
LSM5	YER146W	TIM50	Q02776	476 aa		10.2	□□□□□ -0.78
LSM5	YER146W	COG8	Q04632	607 aa		10.2	□□□□□ -0.78
LSM5	YER146W	PEX19	Q07418	342 aa		10.2	□□□□□ -0.78
LSM5	YER146W	TUS1	Q06412	1307 aa		10.19	□□□□□ -0.78
LSM5	YER146W	GAP1	P19145	602 aa	Predicted RBP	10.19	□□□□□ -0.78
LSM5	YER146W	ASF1	P32447	279 aa		10.19	□□□□□ -0.78
LSM5	YER146W	RTG2	P32608	588 aa	Known RBP	10.19	□□□□□ -0.78
LSM5	YER146W	ARL1	P38116	183 aa	Known RBP	10.19	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms