RNA–Protein interactions for RNA: YER022W

SRB4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB4, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB4	YER022W	RGP1	P16664	663 aa		4.14	□□□□□ -1.75
SRB4	YER022W	NAP1	P25293	417 aa	Known RBP	4.14	□□□□□ -1.75
SRB4	YER022W	PYC2	P32327	1180 aa	Known RBP	4.14	□□□□□ -1.75
SRB4	YER022W	MNR2	P35724	969 aa		4.14	□□□□□ -1.75
SRB4	YER022W	AIM46	P38885	310 aa		4.14	□□□□□ -1.75
SRB4	YER022W	YOL098C	Q12496	1037 aa		4.14	□□□□□ -1.75
SRB4	YER022W	MAD1	P40957	749 aa		4.14	□□□□□ -1.75
SRB4	YER022W	SAP155	P43612	1002 aa		4.14	□□□□□ -1.75
SRB4	YER022W	NUT1	P53114	1132 aa		4.14	□□□□□ -1.75
SRB4	YER022W	ULP1	Q02724	621 aa		4.14	□□□□□ -1.75
SRB4	YER022W	CDC19	P00549	500 aa	Known RBP	4.13	□□□□□ -1.75
SRB4	YER022W	PET112	P33893	541 aa		4.13	□□□□□ -1.75
SRB4	YER022W	TCB1	Q12466	1186 aa		4.13	□□□□□ -1.75
SRB4	YER022W	RIM11	P38615	370 aa		4.12	□□□□□ -1.75
SRB4	YER022W	UBP15	P50101	1230 aa		4.12	□□□□□ -1.75
SRB4	YER022W	MON1	P53129	644 aa		4.12	□□□□□ -1.75
SRB4	YER022W	LSC2	P53312	427 aa		4.12	□□□□□ -1.75
SRB4	YER022W	MCD1	Q12158	566 aa		4.12	□□□□□ -1.75
SRB4	YER022W	CDC34	P14682	295 aa		4.12	□□□□□ -1.75
SRB4	YER022W	CLN2	P20438	545 aa		4.12	□□□□□ -1.75
SRB4	YER022W	APM2	P38700	605 aa		4.12	□□□□□ -1.75
SRB4	YER022W	MRPS18	P42847	217 aa		4.12	□□□□□ -1.75
SRB4	YER022W	FAA4	P47912	694 aa	Known RBP	4.12	□□□□□ -1.75
SRB4	YER022W	GNP1	P48813	663 aa		4.12	□□□□□ -1.75
SRB4	YER022W	ADI1	Q03677	179 aa		4.12	□□□□□ -1.75
SRB4	YER022W	SRF1	Q12516	437 aa		4.12	□□□□□ -1.75
SRB4	YER022W	HEM13	P11353	328 aa	Known RBP	4.11	□□□□□ -1.75
SRB4	YER022W	YER156C	P40093	338 aa	Known RBP	4.11	□□□□□ -1.75
SRB4	YER022W	NAM8	Q00539	523 aa	Known RBP	4.11	□□□□□ -1.75
SRB4	YER022W	FPR4	Q06205	392 aa	Predicted RBP	4.11	□□□□□ -1.75
SRB4	YER022W	GCR1	P07261	785 aa		4.1	□□□□□ -1.75
SRB4	YER022W	PRP5	P21372	849 aa	Predicted RBP	4.1	□□□□□ -1.75
SRB4	YER022W	YGR053C	P53234	283 aa		4.1	□□□□□ -1.75
SRB4	YER022W	IOC4	Q04213	475 aa		4.1	□□□□□ -1.75
SRB4	YER022W	CMR1	Q12510	522 aa	Known RBP	4.1	□□□□□ -1.75
SRB4	YER022W	IDI1	P15496	288 aa		4.1	□□□□□ -1.75
SRB4	YER022W	CIT2	P08679	460 aa		4.09	□□□□□ -1.75
SRB4	YER022W	HVG1	P0CE11	249 aa		4.09	□□□□□ -1.75
SRB4	YER022W	MRPL16	P38064	232 aa		4.09	□□□□□ -1.75
SRB4	YER022W	MSC7	P38694	644 aa		4.09	□□□□□ -1.75
SRB4	YER022W	DOS2	P54858	310 aa		4.09	□□□□□ -1.75
SRB4	YER022W	EEB1	Q02891	456 aa		4.09	□□□□□ -1.75
SRB4	YER022W	NSE3	Q05541	303 aa		4.09	□□□□□ -1.75
SRB4	YER022W	KAR2	P16474	682 aa	Known RBP	4.09	□□□□□ -1.76
SRB4	YER022W	YKL069W	P36088	180 aa		4.09	□□□□□ -1.76
SRB4	YER022W	SPC42	P36094	363 aa		4.09	□□□□□ -1.76
SRB4	YER022W	AMN1	P38285	549 aa	Predicted RBP	4.09	□□□□□ -1.76
SRB4	YER022W	YBR287W	P38355	427 aa		4.09	□□□□□ -1.76
SRB4	YER022W	RVS167	P39743	482 aa	Known RBP	4.09	□□□□□ -1.76
SRB4	YER022W	BUD6	P41697	788 aa		4.09	□□□□□ -1.76
SRB4	YER022W	YAF9	P53930	226 aa		4.09	□□□□□ -1.76
SRB4	YER022W	GDE1	Q02979	1223 aa		4.09	□□□□□ -1.76
SRB4	YER022W	OPT2	Q06593	877 aa		4.09	□□□□□ -1.76
SRB4	YER022W	MRP10	O75012	95 aa		4.08	□□□□□ -1.76
SRB4	YER022W	NPR1	P22211	790 aa		4.08	□□□□□ -1.76
SRB4	YER022W	TFA2	P36145	328 aa		4.08	□□□□□ -1.76
SRB4	YER022W	OSH7	P38755	437 aa		4.08	□□□□□ -1.76
SRB4	YER022W	PPT1	P53043	513 aa		4.08	□□□□□ -1.76
SRB4	YER022W	GLO4	Q12320	285 aa		4.08	□□□□□ -1.76
SRB4	YER022W	HXT13	P39924	564 aa		4.07	□□□□□ -1.76
SRB4	YER022W	HXT17	P53631	564 aa		4.07	□□□□□ -1.76
SRB4	YER022W	HXT15	P54854	567 aa		4.07	□□□□□ -1.76
SRB4	YER022W	BDF2	Q07442	638 aa		4.07	□□□□□ -1.76
SRB4	YER022W	SEC23	P15303	768 aa	Known RBP	4.07	□□□□□ -1.76
SRB4	YER022W	GRX1	P25373	110 aa	Known RBP	4.07	□□□□□ -1.76
SRB4	YER022W	YJL049W	P47048	450 aa		4.07	□□□□□ -1.76
SRB4	YER022W	YGL140C	P53120	1219 aa		4.07	□□□□□ -1.76
SRB4	YER022W	RNH70	P53331	553 aa		4.07	□□□□□ -1.76
SRB4	YER022W	CWC24	P53769	259 aa		4.07	□□□□□ -1.76
SRB4	YER022W	NOG1	Q02892	647 aa	Known RBP	4.07	□□□□□ -1.76
SRB4	YER022W	RPN4	Q03465	531 aa		4.07	□□□□□ -1.76
SRB4	YER022W	PMT7	Q06644	662 aa		4.07	□□□□□ -1.76
SRB4	YER022W	WRS1	Q12109	432 aa	Known RBP	4.07	□□□□□ -1.76
SRB4	YER022W	TY1A-BL	Q12266	440 aa		4.07	□□□□□ -1.76
SRB4	YER022W	FUS1	P11710	512 aa		4.06	□□□□□ -1.76
SRB4	YER022W	PRI2	P20457	528 aa		4.06	□□□□□ -1.76
SRB4	YER022W	GLY1	P37303	387 aa	Known RBP	4.06	□□□□□ -1.76
SRB4	YER022W	RDH54	P38086	958 aa		4.06	□□□□□ -1.76
SRB4	YER022W	NCL1	P38205	684 aa	Known RBP	4.06	□□□□□ -1.76
SRB4	YER022W	XKS1	P42826	600 aa		4.06	□□□□□ -1.76
SRB4	YER022W	UBP2	Q01476	1272 aa		4.06	□□□□□ -1.76
SRB4	YER022W	OPI10	Q08202	246 aa		4.06	□□□□□ -1.76
SRB4	YER022W	PPM2	Q08282	695 aa		4.06	□□□□□ -1.76
SRB4	YER022W	RTT10	Q08924	1013 aa		4.06	□□□□□ -1.76
SRB4	YER022W	REC8	Q12188	680 aa		4.06	□□□□□ -1.76
SRB4	YER022W	MET22	P32179	357 aa		4.06	□□□□□ -1.76
SRB4	YER022W	SRP40	P32583	406 aa	Predicted RBP	4.06	□□□□□ -1.76
SRB4	YER022W	BRN1	P38170	754 aa		4.06	□□□□□ -1.76
SRB4	YER022W	NMD2	P38798	1089 aa	Known RBP	4.06	□□□□□ -1.76
SRB4	YER022W	PEX28	P38848	579 aa		4.06	□□□□□ -1.76
SRB4	YER022W	SPF1	P39986	1215 aa	Known RBP	4.06	□□□□□ -1.76
SRB4	YER022W	CCP1	P00431	361 aa		4.05	□□□□□ -1.76
SRB4	YER022W	YKL091C	P33324	310 aa	Known RBP	4.05	□□□□□ -1.76
SRB4	YER022W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SRB4	YER022W	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
SRB4	YER022W	BIO5	P53744	561 aa	Known RBP	4.05	□□□□□ -1.76
SRB4	YER022W	HDA2	Q06629	674 aa		4.05	□□□□□ -1.76
SRB4	YER022W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SRB4	YER022W	ECM2	P38241	364 aa	Known RBP	4.04	□□□□□ -1.76
SRB4	YER022W	EXO5	P38289	585 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms