RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	ECM23	Q02710	187 aa		8.49	□□□□□ -1.05
SKP1	YDR328C	RRP8	P38961	392 aa	Known RBP	8.48	□□□□□ -1.05
SKP1	YDR328C	SLN1	P39928	1220 aa	Predicted RBP	8.48	□□□□□ -1.05
SKP1	YDR328C	FET4	P40988	552 aa		8.48	□□□□□ -1.05
SKP1	YDR328C	VPS4	P52917	437 aa		8.48	□□□□□ -1.05
SKP1	YDR328C	TIM50	Q02776	476 aa		8.48	□□□□□ -1.05
SKP1	YDR328C	IMP2'	P32351	346 aa		8.47	□□□□□ -1.05
SKP1	YDR328C	IME2	P32581	645 aa		8.47	□□□□□ -1.05
SKP1	YDR328C	RER2	P35196	286 aa		8.47	□□□□□ -1.05
SKP1	YDR328C	KRI1	P42846	591 aa	Known RBP	8.47	□□□□□ -1.05
SKP1	YDR328C	PCL8	Q08966	492 aa		8.47	□□□□□ -1.05
SKP1	YDR328C	YPL260W	Q08977	551 aa		8.47	□□□□□ -1.05
SKP1	YDR328C	RTG2	P32608	588 aa	Known RBP	8.46	□□□□□ -1.06
SKP1	YDR328C	MYO3	P36006	1272 aa		8.46	□□□□□ -1.06
SKP1	YDR328C	MSH4	P40965	878 aa	Predicted RBP	8.46	□□□□□ -1.06
SKP1	YDR328C	UFD2	P54860	961 aa		8.46	□□□□□ -1.06
SKP1	YDR328C	KEL3	Q08979	651 aa	Predicted RBP	8.46	□□□□□ -1.06
SKP1	YDR328C	THS1	P04801	734 aa	Known RBP	8.45	□□□□□ -1.06
SKP1	YDR328C	FBP26	P32604	452 aa		8.45	□□□□□ -1.06
SKP1	YDR328C	VID28	P40547	921 aa		8.45	□□□□□ -1.06
SKP1	YDR328C	HDA1	P53973	706 aa		8.45	□□□□□ -1.06
SKP1	YDR328C	MRD1	Q06106	887 aa	Known RBP	8.45	□□□□□ -1.06
SKP1	YDR328C	RAD61	Q99359	647 aa		8.45	□□□□□ -1.06
SKP1	YDR328C	HPR1	P17629	752 aa	Known RBP	8.44	□□□□□ -1.06
SKP1	YDR328C	ANP1	P32629	500 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	VID27	P40157	782 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	EMP47	P43555	445 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	PTK2	P47116	818 aa	Known RBP	8.44	□□□□□ -1.06
SKP1	YDR328C	NPA3	P47122	385 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	SEN54	Q02825	467 aa	Predicted RBP	8.44	□□□□□ -1.06
SKP1	YDR328C	AAD16	Q02895	342 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	VPS20	Q04272	221 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	EST2	Q06163	884 aa		8.44	□□□□□ -1.06
SKP1	YDR328C	ESF1	Q06344	628 aa	Known RBP	8.44	□□□□□ -1.06
SKP1	YDR328C	LSP1	Q12230	341 aa	Known RBP	8.44	□□□□□ -1.06
SKP1	YDR328C	MATALPHA2	P0CY08	210 aa		8.43	□□□□□ -1.06
SKP1	YDR328C	HMLALPHA2	P0CY09	210 aa		8.43	□□□□□ -1.06
SKP1	YDR328C	CBP1	P07252	654 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	KIN1	P13185	1064 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	RAD53	P22216	821 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	PRE8	P23639	250 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	ADP1	P25371	1049 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	PRO3	P32263	286 aa	Known RBP	8.42	□□□□□ -1.06
SKP1	YDR328C	YKE2	P52553	114 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	PUS5	Q06244	254 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	SKG3	Q06315	1026 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	TFC6	Q06339	672 aa		8.42	□□□□□ -1.06
SKP1	YDR328C	TSR3	Q12094	313 aa	Known RBP	8.42	□□□□□ -1.06
SKP1	YDR328C	RPL19A	P0CX82	189 aa	Known RBP	8.41	□□□□□ -1.06
SKP1	YDR328C	RPL19B	P0CX83	189 aa	Predicted RBP	8.41	□□□□□ -1.06
SKP1	YDR328C	SRM1	P21827	482 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	VPS24	P36095	224 aa	Known RBP	8.41	□□□□□ -1.06
SKP1	YDR328C	YHL017W	P38745	532 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	KEL1	P38853	1164 aa	Known RBP	8.41	□□□□□ -1.06
SKP1	YDR328C	NIT1	P40447	199 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	CTF18	P49956	741 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	ARP5	P53946	755 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	YLR407W	Q06070	228 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	PSK2	Q08217	1101 aa		8.41	□□□□□ -1.06
SKP1	YDR328C	MPH3	P0CE00	602 aa		8.4	□□□□□ -1.06
SKP1	YDR328C	MAK31	P23059	88 aa		8.4	□□□□□ -1.06
SKP1	YDR328C	RIT1	P23796	513 aa		8.4	□□□□□ -1.06
SKP1	YDR328C	MYO5	Q04439	1219 aa	Known RBP	8.4	□□□□□ -1.06
SKP1	YDR328C	AIM7	Q12156	149 aa		8.4	□□□□□ -1.06
SKP1	YDR328C	PMA1	P05030	918 aa	Known RBP	8.39	□□□□□ -1.07
SKP1	YDR328C	SIS2	P36024	562 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	YBL028C	P38202	106 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	VPS8	P39702	1274 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	UBP10	P53874	792 aa	Predicted RBP	8.39	□□□□□ -1.07
SKP1	YDR328C	YDL124W	Q07551	312 aa	Known RBP	8.39	□□□□□ -1.07
SKP1	YDR328C	ELG1	Q12050	791 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	YPL150W	Q12152	901 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	MYO1	P08964	1928 aa		8.39	□□□□□ -1.07
SKP1	YDR328C	TTI1	P36097	1038 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	AKR1	P39010	764 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	PEA2	P40091	420 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	CSM2	P40465	213 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	ALG2	P43636	503 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	RPT6	Q01939	405 aa	Known RBP	8.38	□□□□□ -1.07
SKP1	YDR328C	HRQ1	Q05549	1077 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	ISW2	Q08773	1120 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	CSR2	Q12734	1121 aa		8.38	□□□□□ -1.07
SKP1	YDR328C	TUS1	Q06412	1307 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	TUB2	P02557	457 aa	Known RBP	8.37	□□□□□ -1.07
SKP1	YDR328C	BIK1	P11709	440 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	8.37	□□□□□ -1.07	not detected
SKP1	YDR328C	CBP3	P21560	335 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	CHS3	P29465	1165 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	MAL31	P38156	614 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	CST26	P38226	397 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	PES4	P39684	611 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	BDH2	P39713	417 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	EPL1	P43572	832 aa		8.37	□□□□□ -1.07
SKP1	YDR328C	SNU71	P53207	620 aa	Known RBP	8.37	□□□□□ -1.07
SKP1	YDR328C	CPA2	P03965	1118 aa	Known RBP	8.36	□□□□□ -1.07
SKP1	YDR328C	GAL2	P13181	574 aa		8.36	□□□□□ -1.07
SKP1	YDR328C	RNR3	P21672	869 aa	Known RBP	8.36	□□□□□ -1.07
SKP1	YDR328C	BMH2	P34730	273 aa	Known RBP	8.36	□□□□□ -1.07
SKP1	YDR328C	CLF1	Q12309	687 aa	Predicted RBP	8.36	□□□□□ -1.07
SKP1	YDR328C	YOR111W	Q99210	232 aa		8.36	□□□□□ -1.07

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms