RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W SRC1Q03707 834 aa6.48□□□□□ -1.37
SUB2YDL084W ERB1Q04660 807 aaKnown RBP6.48□□□□□ -1.37
SUB2YDL084W RNH1Q04740 348 aa6.48□□□□□ -1.37
SUB2YDL084W SPP382Q06411 708 aaPredicted RBP6.48□□□□□ -1.37
SUB2YDL084W TOM70P07213 617 aaKnown RBP6.47□□□□□ -1.37
SUB2YDL084W HOM3P10869 527 aa6.47□□□□□ -1.37
SUB2YDL084W PET123P17558 318 aa6.47□□□□□ -1.37
SUB2YDL084W MEF1P25039 761 aa6.47□□□□□ -1.37
SUB2YDL084W APE4P38821 490 aa6.47□□□□□ -1.37
SUB2YDL084W SHE4P51534 789 aa6.47□□□□□ -1.37
SUB2YDL084W MSN5P52918 1224 aa6.47□□□□□ -1.37
SUB2YDL084W YGR273CP53329 174 aa6.47□□□□□ -1.37
SUB2YDL084W HPC2Q01448 625 aa6.47□□□□□ -1.37
SUB2YDL084W KAR5Q04746 504 aa6.47□□□□□ -1.37
SUB2YDL084W DBP9Q06218 594 aaKnown RBP6.47□□□□□ -1.37
SUB2YDL084W NOC3Q07896 663 aaPredicted RBP6.47□□□□□ -1.37
SUB2YDL084W YOR352WQ08816 343 aa6.47□□□□□ -1.37
SUB2YDL084W INH1P01097 85 aa6.46□□□□□ -1.38
SUB2YDL084W CDC3P32457 520 aaKnown RBP6.46□□□□□ -1.38
SUB2YDL084W DPH5P32469 300 aaPredicted RBP6.46□□□□□ -1.38
SUB2YDL084W CCL1P37366 393 aa6.46□□□□□ -1.38
SUB2YDL084W ATG14P38270 344 aa6.46□□□□□ -1.38
SUB2YDL084W MED8P38304 223 aa6.46□□□□□ -1.38
SUB2YDL084W TIF5P38431 405 aaKnown RBP6.46□□□□□ -1.38
SUB2YDL084W CAJ1P39101 391 aa6.46□□□□□ -1.38
SUB2YDL084W FTR1P40088 404 aa6.46□□□□□ -1.38
SUB2YDL084W RAD17P48581 401 aa6.46□□□□□ -1.38
SUB2YDL084W ITC1P53125 1264 aa6.46□□□□□ -1.38
SUB2YDL084W EFM5P53200 248 aaKnown RBP6.46□□□□□ -1.38
SUB2YDL084W RSC1P53236 928 aa6.46□□□□□ -1.38
SUB2YDL084W ADE12P80210 433 aaKnown RBP6.46□□□□□ -1.38
SUB2YDL084W SSQ1Q05931 657 aaPredicted RBP6.46□□□□□ -1.38
SUB2YDL084W YLR352WQ06479 807 aa6.46□□□□□ -1.38
SUB2YDL084W TFB4Q12004 338 aa6.46□□□□□ -1.38
SUB2YDL084W ENT1Q12518 454 aa6.46□□□□□ -1.38
SUB2YDL084W PET494P07390 489 aaPredicted RBP6.45□□□□□ -1.38
SUB2YDL084W PMS1P14242 873 aa6.45□□□□□ -1.38
SUB2YDL084W MCM3P24279 971 aaKnown RBP6.45□□□□□ -1.38
SUB2YDL084W AAD3P25612 363 aa6.45□□□□□ -1.38
SUB2YDL084W TPD3P31383 635 aa6.45□□□□□ -1.38
SUB2YDL084W VPH1P32563 840 aaKnown RBP6.45□□□□□ -1.38
SUB2YDL084W RKM3P38222 552 aa6.45□□□□□ -1.38
SUB2YDL084W SNF7P39929 240 aaKnown RBP6.45□□□□□ -1.38
SUB2YDL084W RTT105P40063 208 aa6.45□□□□□ -1.38
SUB2YDL084W NDC80P40460 691 aa6.45□□□□□ -1.38
SUB2YDL084W LAM5P43560 674 aa6.45□□□□□ -1.38
SUB2YDL084W ACF4P47129 309 aa6.45□□□□□ -1.38
SUB2YDL084W ALG12P53730 551 aa6.45□□□□□ -1.38
SUB2YDL084W RPL34AP87262 121 aaPredicted RBP6.45□□□□□ -1.38
SUB2YDL084W RSM28Q03430 361 aa6.45□□□□□ -1.38
SUB2YDL084W YMR111CQ04461 462 aaPredicted RBP6.45□□□□□ -1.38
SUB2YDL084W RRN11Q04712 507 aa6.45□□□□□ -1.38
SUB2YDL084W YLH47Q06493 454 aa6.45□□□□□ -1.38
SUB2YDL084W RTP1Q12751 981 aa6.45□□□□□ -1.38
SUB2YDL084W RAD3P06839 778 aa6.44□□□□□ -1.38
SUB2YDL084W PUP2P32379 260 aa6.44□□□□□ -1.38
SUB2YDL084W GLO3P38682 493 aaKnown RBP6.44□□□□□ -1.38
SUB2YDL084W PEX18P38855 283 aa6.44□□□□□ -1.38
SUB2YDL084W VPS41P38959 992 aa6.44□□□□□ -1.38
SUB2YDL084W SHE10P53075 577 aa6.44□□□□□ -1.38
SUB2YDL084W YGR016WP53209 190 aa6.44□□□□□ -1.38
SUB2YDL084W YNR021WP53723 404 aaKnown RBP6.44□□□□□ -1.38
SUB2YDL084W RAD33Q04231 177 aa6.44□□□□□ -1.38
SUB2YDL084W SVF1Q05515 481 aa6.44□□□□□ -1.38
SUB2YDL084W SWA2Q06677 668 aa6.44□□□□□ -1.38
SUB2YDL084W CSR1Q06705 408 aaKnown RBP6.44□□□□□ -1.38
SUB2YDL084W SEC15P22224 910 aa6.43□□□□□ -1.38
SUB2YDL084W CLB5P30283 435 aa6.43□□□□□ -1.38
SUB2YDL084W ACP1P32463 125 aa6.43□□□□□ -1.38
SUB2YDL084W YKL100CP34248 587 aa6.43□□□□□ -1.38
SUB2YDL084W YAP1801P38856 637 aa6.43□□□□□ -1.38
SUB2YDL084W ECM1P39715 212 aa6.43□□□□□ -1.38
SUB2YDL084W MET18P40469 1032 aa6.43□□□□□ -1.38
SUB2YDL084W ATP22P50273 684 aaPredicted RBP6.43□□□□□ -1.38
SUB2YDL084W RTC4P53850 401 aa6.43□□□□□ -1.38
SUB2YDL084W NNT1Q05874 261 aa6.43□□□□□ -1.38
SUB2YDL084W ARR2Q06597 130 aa6.43□□□□□ -1.38
SUB2YDL084W VIP1Q06685 1146 aaKnown RBP6.43□□□□□ -1.38
SUB2YDL084W TUF1P02992 437 aaKnown RBP6.42□□□□□ -1.38
SUB2YDL084W RPB2P08518 1224 aaKnown RBP6.42□□□□□ -1.38
SUB2YDL084W TTI1P36097 1038 aa6.42□□□□□ -1.38
SUB2YDL084W TBS1P38114 1094 aa6.42□□□□□ -1.38
SUB2YDL084W UBP14P38237 781 aaKnown RBP6.42□□□□□ -1.38
SUB2YDL084W SHC1P39000 512 aa6.42□□□□□ -1.38
SUB2YDL084W NMA111P53920 997 aa6.42□□□□□ -1.38
SUB2YDL084W ZDS2P54786 942 aa6.42□□□□□ -1.38
SUB2YDL084W SPO19Q03029 223 aa6.42□□□□□ -1.38
SUB2YDL084W YIL002W-AQ3E7Z5 69 aa6.42□□□□□ -1.38
SUB2YDL084W SEN2P16658 377 aa6.41□□□□□ -1.38
SUB2YDL084W SUI2P20459 304 aaKnown RBP6.41□□□□□ -1.38
SUB2YDL084W PGS1P25578 521 aa6.41□□□□□ -1.38
SUB2YDL084W RAD16P31244 790 aa6.41□□□□□ -1.38
SUB2YDL084W SRP40P32583 406 aaPredicted RBP6.41□□□□□ -1.38
SUB2YDL084W RRN3P36070 627 aa6.41□□□□□ -1.38
SUB2YDL084W UBP13P38187 747 aa6.41□□□□□ -1.38
SUB2YDL084W SEC26P41810 973 aaKnown RBP6.41□□□□□ -1.38
SUB2YDL084W VTC2P43585 828 aa6.41□□□□□ -1.38
SUB2YDL084W TFB3Q03290 321 aa6.41□□□□□ -1.38
SUB2YDL084W RPN4Q03465 531 aa6.41□□□□□ -1.38
SUB2YDL084W VPS20Q04272 221 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms