RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	PDC1	P06169	563 aa	Known RBP	13.19	□□□□□ -0.3
PCH2	YBR186W	SEC18	P18759	758 aa	Known RBP	13.19	□□□□□ -0.3
PCH2	YBR186W	GDT1	P38301	280 aa	Predicted RBP	13.19	□□□□□ -0.3
PCH2	YBR186W	RIX1	P38883	763 aa	Predicted RBP	13.19	□□□□□ -0.3
PCH2	YBR186W	YMR102C	Q03177	834 aa		13.19	□□□□□ -0.3
PCH2	YBR186W	DIT2	P21595	489 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	REI1	P38344	393 aa	Predicted RBP	13.18	□□□□□ -0.3
PCH2	YBR186W	FCP1	Q03254	732 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	GYL1	Q04322	720 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	SNU66	Q12420	587 aa	Predicted RBP	13.18	□□□□□ -0.3
PCH2	YBR186W	PRI1	P10363	409 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	PHO13	P19881	312 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	RRP43	P25359	394 aa	Predicted RBP	13.18	□□□□□ -0.3
PCH2	YBR186W	DPB3	P27344	201 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	RRP1	P35178	278 aa	Predicted RBP	13.18	□□□□□ -0.3
PCH2	YBR186W	AVT3	P36062	692 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	YNL193W	P53870	558 aa		13.18	□□□□□ -0.3
PCH2	YBR186W	NDC80	P40460	691 aa		13.17	□□□□□ -0.3
PCH2	YBR186W	CAF130	P53280	1122 aa	Predicted RBP	13.17	□□□□□ -0.3
PCH2	YBR186W	LAM4	P38800	1345 aa		13.16	□□□□□ -0.3
PCH2	YBR186W	RPL22A	P05749	121 aa	Known RBP	13.16	□□□□□ -0.3
PCH2	YBR186W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.16	□□□□□ -0.3	not detected
PCH2	YBR186W	MGA2	P40578	1113 aa		13.16	□□□□□ -0.3
PCH2	YBR186W	HCR1	Q05775	265 aa	Known RBP	13.16	□□□□□ -0.3
PCH2	YBR186W	ATG13	Q06628	738 aa		13.16	□□□□□ -0.3
PCH2	YBR186W	YMR147W	P40218	223 aa	Known RBP	13.15	□□□□□ -0.3
PCH2	YBR186W	ALF1	P53904	254 aa		13.15	□□□□□ -0.3
PCH2	YBR186W	SSF2	Q12153	453 aa	Predicted RBP	13.15	□□□□□ -0.3
PCH2	YBR186W	UTP10	P42945	1769 aa	Known RBP	13.15	□□□□□ -0.3
PCH2	YBR186W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.15	□□□□□ -0.31	not detected
PCH2	YBR186W	CCT4	P39078	528 aa	Known RBP	13.15	□□□□□ -0.31
PCH2	YBR186W	MAL13	P53338	473 aa		13.15	□□□□□ -0.31
PCH2	YBR186W	UBP16	Q02863	499 aa		13.15	□□□□□ -0.31
PCH2	YBR186W	PKH3	Q03306	898 aa	Predicted RBP	13.15	□□□□□ -0.31
PCH2	YBR186W	VPS38	Q05919	439 aa		13.15	□□□□□ -0.31
PCH2	YBR186W	ARG8	P18544	423 aa		13.14	□□□□□ -0.31
PCH2	YBR186W	STO1	P34160	861 aa	Known RBP	13.14	□□□□□ -0.31
PCH2	YBR186W	ADE17	P38009	592 aa	Known RBP	13.14	□□□□□ -0.31
PCH2	YBR186W	ALD3	P54114	506 aa		13.14	□□□□□ -0.31
PCH2	YBR186W	MPH3	P0CE00	602 aa		13.13	□□□□□ -0.31
PCH2	YBR186W	CBP3	P21560	335 aa		13.13	□□□□□ -0.31
PCH2	YBR186W	MSH3	P25336	1018 aa		13.13	□□□□□ -0.31
PCH2	YBR186W	SAC6	P32599	642 aa	Known RBP	13.13	□□□□□ -0.31
PCH2	YBR186W	SAP190	P36123	1033 aa		13.13	□□□□□ -0.31
PCH2	YBR186W	GFD1	Q04839	188 aa	Known RBP	13.13	□□□□□ -0.31
PCH2	YBR186W	HCA4	P20448	770 aa	Known RBP	13.12	□□□□□ -0.31
PCH2	YBR186W	YEL043W	P32618	956 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	MET1	P36150	593 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	PXL1	P36166	706 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	SEC9	P40357	651 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	RPO26	P20435	155 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	RPN10	P38886	268 aa	Known RBP	13.12	□□□□□ -0.31
PCH2	YBR186W	YOL098C	Q12496	1037 aa		13.12	□□□□□ -0.31
PCH2	YBR186W	CRG1	P38892	291 aa	RIP-Chip data	13.11	□□□□□ -0.31	not detected
PCH2	YBR186W	CTK3	P46963	296 aa	Predicted RBP	13.11	□□□□□ -0.31
PCH2	YBR186W	FAR11	P53917	953 aa		13.11	□□□□□ -0.31
PCH2	YBR186W	FRK1	Q03002	865 aa	Predicted RBP	13.11	□□□□□ -0.31
PCH2	YBR186W	EST2	Q06163	884 aa		13.11	□□□□□ -0.31
PCH2	YBR186W	DCS2	Q12123	353 aa		13.11	□□□□□ -0.31
PCH2	YBR186W	TAH18	Q12181	623 aa		13.11	□□□□□ -0.31
PCH2	YBR186W	SLD2	P34252	453 aa		13.1	□□□□□ -0.31
PCH2	YBR186W	SPN1	Q06505	410 aa	Predicted RBP	13.1	□□□□□ -0.31
PCH2	YBR186W	AFT2	Q08957	416 aa		13.1	□□□□□ -0.31
PCH2	YBR186W	DCD1	P06773	312 aa		13.09	□□□□□ -0.31
PCH2	YBR186W	CUE3	P53137	624 aa	Known RBP	13.09	□□□□□ -0.31
PCH2	YBR186W	OMS1	Q06668	471 aa		13.09	□□□□□ -0.31
PCH2	YBR186W	ATG23	Q06671	453 aa		13.09	□□□□□ -0.31
PCH2	YBR186W	RRI2	Q12348	645 aa		13.09	□□□□□ -0.31
PCH2	YBR186W	URA1	P28272	314 aa	Predicted RBP	13.08	□□□□□ -0.31
PCH2	YBR186W	RGD1	P38339	666 aa		13.08	□□□□□ -0.31
PCH2	YBR186W	ENP2	P48234	707 aa	Known RBP	13.08	□□□□□ -0.31
PCH2	YBR186W	TUM1	Q08686	304 aa	Known RBP	13.08	□□□□□ -0.31
PCH2	YBR186W	ATG9	Q12142	997 aa		13.08	□□□□□ -0.31
PCH2	YBR186W	SEC65	P29478	273 aa		13.08	□□□□□ -0.32
PCH2	YBR186W	SWE1	P32944	819 aa		13.08	□□□□□ -0.32
PCH2	YBR186W	CCC2	P38995	1004 aa		13.08	□□□□□ -0.32
PCH2	YBR186W	AKR1	P39010	764 aa		13.08	□□□□□ -0.32
PCH2	YBR186W	RER2	P35196	286 aa		13.07	□□□□□ -0.32
PCH2	YBR186W	MUD2	P36084	527 aa	Known RBP	13.07	□□□□□ -0.32
PCH2	YBR186W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.07	□□□□□ -0.32	not detected
PCH2	YBR186W	PHM7	Q12252	991 aa		13.06	□□□□□ -0.32
PCH2	YBR186W	SEC23	P15303	768 aa	Known RBP	13.05	□□□□□ -0.32
PCH2	YBR186W	SAP1	P39955	897 aa	Known RBP	13.05	□□□□□ -0.32
PCH2	YBR186W	BOP3	P53958	396 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	OSH2	Q12451	1283 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	BMH2	P34730	273 aa	Known RBP	13.05	□□□□□ -0.32
PCH2	YBR186W	YKL133C	P36066	463 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	SPT8	P38915	602 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	BUD16	P39988	312 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	PTP3	P40048	928 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	FYV8	P46949	817 aa	Known RBP	13.05	□□□□□ -0.32
PCH2	YBR186W	GET3	Q12154	354 aa	Known RBP	13.05	□□□□□ -0.32
PCH2	YBR186W	SAC3	P46674	1301 aa		13.05	□□□□□ -0.32
PCH2	YBR186W	CDC6	P09119	513 aa		13.04	□□□□□ -0.32
PCH2	YBR186W	SWI4	P25302	1093 aa	Known RBP	13.04	□□□□□ -0.32
PCH2	YBR186W	BMH1	P29311	267 aa	Known RBP	13.04	□□□□□ -0.32
PCH2	YBR186W	EFM2	P38347	419 aa		13.04	□□□□□ -0.32
PCH2	YBR186W	KAR5	Q04746	504 aa		13.04	□□□□□ -0.32
PCH2	YBR186W	CSC1	Q06538	782 aa		13.04	□□□□□ -0.32
PCH2	YBR186W	VAC14	Q06708	880 aa		13.04	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms