RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 Polr3glQ8R0C0 218 aa16.46■□□□□ 0.23
Msh4-201ENSMUST00000005630 Eif2s2Q99L45 331 aaKnown RBP16.46■□□□□ 0.23
Msh4-201ENSMUST00000005630 Zc3h13E9Q784 1729 aaKnown RBP16.46■□□□□ 0.23
Msh4-201ENSMUST00000005630 RictorQ6QI06 1708 aa16.46■□□□□ 0.23
Msh4-201ENSMUST00000005630 Cdk19Q8BWD8 501 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Trim30dE9PWL0 497 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Armcx1Q9CX83 456 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ercc6l2Q9JIM3 1537 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Gsto1O09131 240 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Hsp90aa1P07901 733 aaKnown RBP16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Atp1b4Q99ME6 356 aa16.45■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ipo8Q7TMY7 1010 aa16.44■□□□□ 0.22
Msh4-201ENSMUST00000005630 Atp2b2Q9R0K7 1198 aa16.44■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ccar1Q8CH18 1146 aaKnown RBP16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 Tmc1Q8R4P5 757 aa16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ttc21aQ8C0S4 1314 aa16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 Plekhg1F6S200 1446 aa16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ankrd50F7BE84 1390 aa16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 CastP51125 788 aa16.43■□□□□ 0.22
Msh4-201ENSMUST00000005630 Q4VA45 678 aa16.42■□□□□ 0.22
Msh4-201ENSMUST00000005630 Afap1Q80YS6 731 aa16.42■□□□□ 0.22
Msh4-201ENSMUST00000005630 Mre11Q61216 706 aa16.41■□□□□ 0.22
Msh4-201ENSMUST00000005630 Utp14aQ640M1 767 aaKnown RBP16.41■□□□□ 0.22
Msh4-201ENSMUST00000005630 Slc12a5Q91V14 1138 aa16.41■□□□□ 0.22
Msh4-201ENSMUST00000005630 Asxl2Q8BZ32 1370 aa16.41■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ppm1gQ61074 542 aa16.4■□□□□ 0.22
Msh4-201ENSMUST00000005630 Trim28Q62318 834 aa16.4■□□□□ 0.22
Msh4-201ENSMUST00000005630 Ppp1r9bQ6R891 817 aaKnown RBP16.4■□□□□ 0.22
Msh4-201ENSMUST00000005630 Atp7bQ64446 1462 aa16.39■□□□□ 0.21
Msh4-201ENSMUST00000005630 KarsQ99MN1 595 aaKnown RBP16.39■□□□□ 0.21
Msh4-201ENSMUST00000005630 Map3k19E9Q3S4 1311 aa16.39■□□□□ 0.21
Msh4-201ENSMUST00000005630 Ppp2r3aB2RXC8 1150 aa16.39■□□□□ 0.21
Msh4-201ENSMUST00000005630 AU019823E9PUQ3 292 aa16.39■□□□□ 0.21
Msh4-201ENSMUST00000005630 Cavin4A2AMM0 362 aa16.38■□□□□ 0.21
Msh4-201ENSMUST00000005630 AampJ3QN89 436 aa16.38■□□□□ 0.21
Msh4-201ENSMUST00000005630 Pik3r4Q8VD65 1358 aa16.38■□□□□ 0.21
Msh4-201ENSMUST00000005630 Kif1aP33173 1695 aa16.38■□□□□ 0.21
Msh4-201ENSMUST00000005630 PalmQ9Z0P4 383 aa16.37■□□□□ 0.21
Msh4-201ENSMUST00000005630 Dip2aQ8BWT5 1523 aa16.37■□□□□ 0.21
Msh4-201ENSMUST00000005630 PaskQ8CEE6 1383 aa16.37■□□□□ 0.21
Msh4-201ENSMUST00000005630 Ecm2Q5FW85 670 aa16.37■□□□□ 0.21
Msh4-201ENSMUST00000005630 Spef2Q8C9J3 1734 aa16.37■□□□□ 0.21
Msh4-201ENSMUST00000005630 Hsp90ab1P11499 724 aaKnown RBP16.35■□□□□ 0.21
Msh4-201ENSMUST00000005630 Pdlim2Q8R1G6 349 aa16.35■□□□□ 0.21
Msh4-201ENSMUST00000005630 Chd4Q6PDQ2 1915 aaKnown RBP16.35■□□□□ 0.21
Msh4-201ENSMUST00000005630 Uhrf1bp1lA2RSJ4 1457 aa16.34■□□□□ 0.21
Msh4-201ENSMUST00000005630 Rbm25B2RY56 838 aaKnown RBP16.34■□□□□ 0.21
Msh4-201ENSMUST00000005630 Maco1Q7TQE6 664 aaKnown RBP16.34■□□□□ 0.21
Msh4-201ENSMUST00000005630 IghaA0A0A6YXW6 389 aa16.34■□□□□ 0.21
Msh4-201ENSMUST00000005630 Cluap1Q8R3P7 413 aa16.33■□□□□ 0.2
Msh4-201ENSMUST00000005630 FanciQ8K368 1330 aa16.32■□□□□ 0.2
Msh4-201ENSMUST00000005630 Pik3c2bE9QAN8 1632 aa16.32■□□□□ 0.2
Msh4-201ENSMUST00000005630 Ccdc60Q8C4J0 545 aa16.32■□□□□ 0.2
Msh4-201ENSMUST00000005630 Ciz1Q8VEH2 845 aa16.32■□□□□ 0.2
Msh4-201ENSMUST00000005630 NpatQ8BMA5 1420 aa16.31■□□□□ 0.2
Msh4-201ENSMUST00000005630 Tbc1d32Q3URV1 1296 aa16.31■□□□□ 0.2
Msh4-201ENSMUST00000005630 PrkcshO08795 521 aa16.31■□□□□ 0.2
Msh4-201ENSMUST00000005630 Znf330Q922H9 316 aa16.31■□□□□ 0.2
Msh4-201ENSMUST00000005630 Phlpp2Q8BXA7 1320 aa16.3■□□□□ 0.2
Msh4-201ENSMUST00000005630 Atl3Q91YH5 541 aa16.3■□□□□ 0.2
Msh4-201ENSMUST00000005630 Nsd3Q6P2L6 1439 aa16.3■□□□□ 0.2
Msh4-201ENSMUST00000005630 DaxxO35613 739 aa16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Fchsd2Q3USJ8 740 aa16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Tnrc6bQ8BKI2 1810 aaKnown RBP16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Nutm1Q8BHP2 1126 aa16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Kif2cQ922S8 721 aa16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Chd2E9PZM4 1827 aaKnown RBP16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Swt1Q9DBQ9 907 aa16.29■□□□□ 0.2
Msh4-201ENSMUST00000005630 Cps1Q8C196 1500 aa16.28■□□□□ 0.2
Msh4-201ENSMUST00000005630 Ppp1r18Q8BQ30 594 aa16.28■□□□□ 0.2
Msh4-201ENSMUST00000005630 Sptbn5F6UCX4 1208 aa16.28■□□□□ 0.2
Msh4-201ENSMUST00000005630 Rangap1P46061 589 aaKnown RBP16.28■□□□□ 0.2
Msh4-201ENSMUST00000005630 Ccdc9Q8VC31 543 aaKnown RBP16.27■□□□□ 0.2
Msh4-201ENSMUST00000005630 Ccdc171E9Q1U1 1324 aa16.27■□□□□ 0.2
Msh4-201ENSMUST00000005630 PtpruB1AUH1 1446 aa16.27■□□□□ 0.2
Msh4-201ENSMUST00000005630 Gm6268A2A3U9 297 aa16.27■□□□□ 0.19
Msh4-201ENSMUST00000005630 Nectin2P32507 530 aa16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 Gemin5Q8BX17 1502 aaKnown RBP16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 Ppp1r15aP17564 657 aa16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 G3bp1P97855 465 aaKnown RBP16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 Cdc37l1Q9CZP7 335 aa16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 Tet3Q8BG87 1668 aa16.26■□□□□ 0.19
Msh4-201ENSMUST00000005630 Vamp4O70480 141 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Mcm10Q0VBD2 885 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Birc3O08863 600 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Znf316Q6PGE4 1016 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Tnpo1Q8BFY9 898 aaKnown RBP16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 ArxO35085 564 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Hs1bp3Q3TC93 395 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Q3UPC7 1272 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Plekhm2Q80TQ5 1018 aa16.25■□□□□ 0.19
Msh4-201ENSMUST00000005630 Dip2bQ3UH60 1574 aa16.24■□□□□ 0.19
Msh4-201ENSMUST00000005630 Med1Q925J9 1575 aa16.23■□□□□ 0.19
Msh4-201ENSMUST00000005630 N4bp2F8VQG7 1678 aaKnown RBP16.23■□□□□ 0.19
Msh4-201ENSMUST00000005630 Kif20bQ80WE4 1774 aaKnown RBP16.23■□□□□ 0.19
Msh4-201ENSMUST00000005630 Aplp1Q03157 653 aa16.23■□□□□ 0.19
Msh4-201ENSMUST00000005630 Senp3Q9EP97 568 aaKnown RBP16.23■□□□□ 0.19
Msh4-201ENSMUST00000005630 Rsph6aQ8CDR2 708 aa16.22■□□□□ 0.19
Msh4-201ENSMUST00000005630 NalcnQ8BXR5 1738 aa16.22■□□□□ 0.19
Msh4-201ENSMUST00000005630 Slit3Q9WVB4 1523 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms