RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 NischQ80TM9 1593 aa25.07■■□□□ 1.6
Msh4-201ENSMUST00000005630 Gm35339A0A140LHH9 1649 aa24.77■■□□□ 1.56
Msh4-201ENSMUST00000005630 Abcc9P70170 1546 aa24.41■■□□□ 1.5
Msh4-201ENSMUST00000005630 Abcc8B2RUS7 1588 aa23.84■■□□□ 1.41
Msh4-201ENSMUST00000005630 Rhox8Q6VSS7 320 aa23■■□□□ 1.27
Msh4-201ENSMUST00000005630 Rtl1Q7M732 1744 aa22.99■■□□□ 1.27
Msh4-201ENSMUST00000005630 Ccdc180J3QNE4 1664 aa22.55■■□□□ 1.2
Msh4-201ENSMUST00000005630 Zcchc6Q5BLK4 1491 aaKnown RBP22.31■■□□□ 1.16
Msh4-201ENSMUST00000005630 ScribQ80U72 1612 aa22.3■■□□□ 1.16
Msh4-201ENSMUST00000005630 Dcaf1Q80TR8 1506 aa22.19■■□□□ 1.14
Msh4-201ENSMUST00000005630 Rb1cc1Q9ESK9 1588 aa21.99■■□□□ 1.11
Msh4-201ENSMUST00000005630 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Msh4-201ENSMUST00000005630 Baz1aO88379 1555 aa21.72■■□□□ 1.07
Msh4-201ENSMUST00000005630 NacadQ5SWP3 1504 aa21.52■■□□□ 1.03
Msh4-201ENSMUST00000005630 Ccdc136Q3TVA9 1136 aa21.42■■□□□ 1.02
Msh4-201ENSMUST00000005630 HrcG5E8J6 738 aa21.35■■□□□ 1.01
Msh4-201ENSMUST00000005630 Smarca2Q6DIC0 1577 aa21.29■■□□□ 1
Msh4-201ENSMUST00000005630 Crybg2B7ZCC2 1516 aa21.26■□□□□ 0.99
Msh4-201ENSMUST00000005630 Rpgrip1Q9EPQ2 1331 aa21.13■□□□□ 0.97
Msh4-201ENSMUST00000005630 Sycp2Q9CUU3 1500 aa21.1■□□□□ 0.97
Msh4-201ENSMUST00000005630 Acin1Q9JIX8 1338 aaKnown RBP21■□□□□ 0.95
Msh4-201ENSMUST00000005630 Ehmt2Q9Z148 1263 aaKnown RBP20.94■□□□□ 0.94
Msh4-201ENSMUST00000005630 Trim41Q5NCC3 630 aa20.93■□□□□ 0.94
Msh4-201ENSMUST00000005630 Cep164Q5DU05 1446 aa20.81■□□□□ 0.92
Msh4-201ENSMUST00000005630 Cecr2E9Q2Z1 1453 aa20.75■□□□□ 0.91
Msh4-201ENSMUST00000005630 BicraF8VPZ9 1578 aa20.73■□□□□ 0.91
Msh4-201ENSMUST00000005630 Rsf1E9PWW9 1441 aaKnown RBP20.62■□□□□ 0.89
Msh4-201ENSMUST00000005630 Synj1Q8CHC4 1574 aa20.61■□□□□ 0.89
Msh4-201ENSMUST00000005630 Brd4Q9ESU6 1400 aaKnown RBP20.6■□□□□ 0.89
Msh4-201ENSMUST00000005630 Chic1Q8CBW7 227 aa20.53■□□□□ 0.88
Msh4-201ENSMUST00000005630 Ccdc88bQ4QRL3 1481 aa20.49■□□□□ 0.87
Msh4-201ENSMUST00000005630 Golga3P55937 1487 aa20.47■□□□□ 0.87
Msh4-201ENSMUST00000005630 Cngb1E1AZ71 1325 aa20.42■□□□□ 0.86
Msh4-201ENSMUST00000005630 CftrP26361 1476 aa20.4■□□□□ 0.86
Msh4-201ENSMUST00000005630 Top2bQ64511 1612 aa20.39■□□□□ 0.85
Msh4-201ENSMUST00000005630 Cttnbp2B9EJA2 1648 aa20.31■□□□□ 0.84
Msh4-201ENSMUST00000005630 Gab3Q8BSM5 595 aa20.24■□□□□ 0.83
Msh4-201ENSMUST00000005630 Cc2d2aQ8CFW7 1633 aa20.21■□□□□ 0.83
Msh4-201ENSMUST00000005630 Smarca4Q3TKT4 1613 aaKnown RBP20.19■□□□□ 0.82
Msh4-201ENSMUST00000005630 Pcgf6Q99NA9 353 aa20.15■□□□□ 0.82
Msh4-201ENSMUST00000005630 Esf1Q3V1V3 845 aaKnown RBP20.03■□□□□ 0.8
Msh4-201ENSMUST00000005630 Top2aQ01320 1528 aaKnown RBP19.94■□□□□ 0.78
Msh4-201ENSMUST00000005630 Rapgef2Q8CHG7 1496 aa19.93■□□□□ 0.78
Msh4-201ENSMUST00000005630 Iqgap2Q3UQ44 1575 aa19.93■□□□□ 0.78
Msh4-201ENSMUST00000005630 Fmn1Q05860 1466 aa19.91■□□□□ 0.78
Msh4-201ENSMUST00000005630 Supt5hO55201 1082 aaKnown RBP19.88■□□□□ 0.77
Msh4-201ENSMUST00000005630 Mier1Q5UAK0 511 aa19.83■□□□□ 0.76
Msh4-201ENSMUST00000005630 Eif4g1Q6NZJ6 1600 aaKnown RBP19.74■□□□□ 0.75
Msh4-201ENSMUST00000005630 Cep162Q6ZQ06 1403 aa19.71■□□□□ 0.75
Msh4-201ENSMUST00000005630 Atad2bE9Q166 1460 aaKnown RBP19.71■□□□□ 0.75
Msh4-201ENSMUST00000005630 TnnQ80Z71 1560 aa19.71■□□□□ 0.75
Msh4-201ENSMUST00000005630 NefmP08553 848 aa19.64■□□□□ 0.73
Msh4-201ENSMUST00000005630 Zeb1Q64318 1117 aa19.58■□□□□ 0.72
Msh4-201ENSMUST00000005630 Pds5bQ4VA53 1446 aaKnown RBP19.54■□□□□ 0.72
Msh4-201ENSMUST00000005630 Frmpd1A2AKB4 1549 aa19.53■□□□□ 0.72
Msh4-201ENSMUST00000005630 Wdr62Q3U3T8 1523 aa19.52■□□□□ 0.72
Msh4-201ENSMUST00000005630 Unc13aQ4KUS2 1712 aa19.51■□□□□ 0.71
Msh4-201ENSMUST00000005630 UbtfP25976 765 aaKnown RBP19.48■□□□□ 0.71
Msh4-201ENSMUST00000005630 Lamc3Q9R0B6 1581 aa19.45■□□□□ 0.7
Msh4-201ENSMUST00000005630 Myt1lP97500 1187 aa19.44■□□□□ 0.7
Msh4-201ENSMUST00000005630 PtprkP35822 1457 aa19.44■□□□□ 0.7
Msh4-201ENSMUST00000005630 Arhgap35Q91YM2 1499 aa19.42■□□□□ 0.7
Msh4-201ENSMUST00000005630 Sall2Q9QX96 1004 aa19.41■□□□□ 0.7
Msh4-201ENSMUST00000005630 NrkQ9R0G8 1455 aa19.38■□□□□ 0.69
Msh4-201ENSMUST00000005630 Npm2Q80W85 207 aa19.35■□□□□ 0.69
Msh4-201ENSMUST00000005630 Neurod1Q60867 357 aa19.34■□□□□ 0.69
Msh4-201ENSMUST00000005630 Clip1Q922J3 1391 aa19.33■□□□□ 0.69
Msh4-201ENSMUST00000005630 Camsap1A2AHC3 1581 aa19.31■□□□□ 0.68
Msh4-201ENSMUST00000005630 Ncapd3Q6ZQK0 1506 aa19.31■□□□□ 0.68
Msh4-201ENSMUST00000005630 Arap1Q4LDD4 1452 aa19.28■□□□□ 0.68
Msh4-201ENSMUST00000005630 Plekhg3Q4VAC9 1341 aa19.26■□□□□ 0.67
Msh4-201ENSMUST00000005630 Shroom4Q1W617 1475 aa19.25■□□□□ 0.67
Msh4-201ENSMUST00000005630 Aebp2Q9Z248 504 aaKnown RBP19.25■□□□□ 0.67
Msh4-201ENSMUST00000005630 Kif15Q6P9L6 1387 aa19.22■□□□□ 0.67
Msh4-201ENSMUST00000005630 Arhgef5E9Q7D5 1581 aa19.19■□□□□ 0.66
Msh4-201ENSMUST00000005630 Ercc6F8VPZ5 1481 aa19.19■□□□□ 0.66
Msh4-201ENSMUST00000005630 Map3k1P53349 1493 aa19.18■□□□□ 0.66
Msh4-201ENSMUST00000005630 Kdm5bQ80Y84 1544 aa19.16■□□□□ 0.66
Msh4-201ENSMUST00000005630 Grin2bQ01097 1482 aa19.16■□□□□ 0.66
Msh4-201ENSMUST00000005630 Eea1Q8BL66 1411 aa19.14■□□□□ 0.65
Msh4-201ENSMUST00000005630 Erich3F6QRE9 1637 aa19.12■□□□□ 0.65
Msh4-201ENSMUST00000005630 Il27Q8K3I6 234 aa19.1■□□□□ 0.65
Msh4-201ENSMUST00000005630 Mroh2bQ7M6Y6 1581 aa19.08■□□□□ 0.65
Msh4-201ENSMUST00000005630 Ankrd26Q811D2 1581 aa19.08■□□□□ 0.65
Msh4-201ENSMUST00000005630 Tiam1Q60610 1591 aa19.07■□□□□ 0.64
Msh4-201ENSMUST00000005630 Ccdc18Q640L5 1455 aa19.06■□□□□ 0.64
Msh4-201ENSMUST00000005630 Las1lA2BE28 776 aaKnown RBP19.06■□□□□ 0.64
Msh4-201ENSMUST00000005630 Thoc2B1AZI6 1594 aaKnown RBP19.04■□□□□ 0.64
Msh4-201ENSMUST00000005630 Setd5Q5XJV7 1441 aa19.04■□□□□ 0.64
Msh4-201ENSMUST00000005630 AqrQ8CFQ3 1481 aaKnown RBP19.03■□□□□ 0.64
Msh4-201ENSMUST00000005630 TonslQ6NZL6 1363 aa19.01■□□□□ 0.63
Msh4-201ENSMUST00000005630 Wdr66E9Q743 1299 aa19■□□□□ 0.63
Msh4-201ENSMUST00000005630 Baz1bQ9Z277 1479 aa19■□□□□ 0.63
Msh4-201ENSMUST00000005630 ClspnQ80YR7 1315 aa18.99■□□□□ 0.63
Msh4-201ENSMUST00000005630 TchhA0A0B4J1F9 1599 aa18.99■□□□□ 0.63
Msh4-201ENSMUST00000005630 Pcf11G3X9Z4 1553 aa18.99■□□□□ 0.63
Msh4-201ENSMUST00000005630 Ap3b1Q9Z1T1 1105 aa18.99■□□□□ 0.63
Msh4-201ENSMUST00000005630 Slx4Q6P1D7 1565 aa18.99■□□□□ 0.63
Msh4-201ENSMUST00000005630 Lmo7E9PYF4 1699 aaKnown RBP18.98■□□□□ 0.63
Msh4-201ENSMUST00000005630 Naip1Q9QWK5 1403 aa18.97■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms