RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	CHS7	P38843	316 aa		4.24	□□□□□ -1.73
YPR158C-D	YPR158C-D	PTI1	P39927	425 aa	Predicted RBP	4.24	□□□□□ -1.73
YPR158C-D	YPR158C-D	LCD1	Q04377	747 aa		4.24	□□□□□ -1.73
YPR158C-D	YPR158C-D	YLR257W	Q06146	321 aa	Known RBP	4.24	□□□□□ -1.73
YPR158C-D	YPR158C-D	PER1	P25625	357 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	PIP2	P52960	996 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	HVG1	P0CE11	249 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	SPO74	P45819	413 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	AUS1	Q08409	1394 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	CAF20	P12962	161 aa	Known RBP	4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	SSM4	P40318	1319 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	ALD5	P40047	520 aa	Known RBP	4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	NET1	P47035	1189 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	EIS1	Q05050	843 aa	Known RBP	4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	MXR1	P40029	184 aa		4.23	□□□□□ -1.73
YPR158C-D	YPR158C-D	KCC4	P25389	1037 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	RTG3	P38165	486 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	SIZ1	Q04195	904 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	SUB2	Q07478	446 aa	Known RBP	4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	ETP1	P38748	585 aa	Known RBP	4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	DSN1	P40568	576 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	ERT1	P38140	529 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	APN2	P38207	520 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	POM152	P39685	1337 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	VMA2	P16140	517 aa	Known RBP	4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	NPR2	P39923	615 aa		4.22	□□□□□ -1.73
YPR158C-D	YPR158C-D	TAF1	P46677	1066 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	UTP13	Q05946	817 aa	Known RBP	4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	FAR10	Q06001	478 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	VAS1	P07806	1104 aa	Known RBP	4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	MNR2	P35724	969 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	UIP5	P36137	443 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	MRPL7	P36519	292 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	VPS64	Q03944	604 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	HAT1	Q12341	374 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	RGT1	P32862	1170 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	PCA1	P38360	1216 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	TAF10	Q12030	206 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	ENT3	P47160	408 aa		4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	YMR265C	Q03508	461 aa	Known RBP	4.21	□□□□□ -1.74
YPR158C-D	YPR158C-D	CHC1	P22137	1653 aa	Known RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	KIN1	P13185	1064 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	OXP1	P28273	1286 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	TPM2	P40414	161 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	YML053C	Q04978	212 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	FUB1	P25659	250 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	PTC3	P34221	468 aa	Known RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	NOP2	P40991	618 aa	Known RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	MSC6	Q08818	692 aa	Known RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	VMR1	P38735	1592 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	PMA1	P05030	918 aa	Known RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	AIM21	P40563	679 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	SYF1	Q04048	859 aa	Predicted RBP	4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	YDR338C	Q05497	695 aa		4.2	□□□□□ -1.74
YPR158C-D	YPR158C-D	MDL2	P33311	773 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	RKM4	Q12504	494 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	BNI1	P41832	1953 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	DAN4	P47179	1161 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	MSB3	P48566	633 aa	Predicted RBP	4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	PIG1	Q06216	648 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	DIP2	Q12220	943 aa	Predicted RBP	4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	PKC1	P24583	1151 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	CLU1	Q03690	1277 aa	Known RBP	4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	GAS4	Q08271	471 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	YBL028C	P38202	106 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	YGR130C	P53278	816 aa		4.19	□□□□□ -1.74
YPR158C-D	YPR158C-D	FPR4	Q06205	392 aa	Predicted RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	NCB2	Q92317	146 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	YLR278C	Q05854	1341 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	RPS24A	P0CX31	135 aa	Known RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	RPS24B	P0CX32	135 aa	Known RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	BUD14	P27637	709 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	THI22	Q06490	572 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	YCG1	Q06680	1035 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	PSE1	P32337	1089 aa	Known RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	CBF2	P32504	956 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	SAH1	P39954	449 aa	Known RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	HXT15	P54854	567 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	DPL1	Q05567	589 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	PGA3	Q12746	312 aa	Known RBP	4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YPR158C-D	YPR158C-D	DPH6	Q12429	685 aa		4.18	□□□□□ -1.74
YPR158C-D	YPR158C-D	BFA1	P47113	574 aa		4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	SPO14	P36126	1683 aa		4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	GGA2	P38817	585 aa	Known RBP	4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	GSM1	P42950	618 aa		4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	DBP1	P24784	617 aa	Known RBP	4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	SUR7	P54003	302 aa		4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	MSD1	P15179	658 aa	Known RBP	4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	NUG1	P40010	520 aa	Known RBP	4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	YGL082W	P53155	381 aa		4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.17	□□□□□ -1.74
YPR158C-D	YPR158C-D	HSP104	P31539	908 aa	Known RBP	4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	TY1B-A	O13527	1196 aa	Known RBP	4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	CPS1	P27614	576 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	GYP8	P43570	497 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	LSB1	P53281	241 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	EAF1	Q06337	982 aa		4.16	□□□□□ -1.74
YPR158C-D	YPR158C-D	SSK22	P25390	1331 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms