RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	RRP5	Q05022	1729 aa	Known RBP	3.05	□□□□□ -1.92
LCL1	YPL056C	AUS1	Q08409	1394 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	NUP145	P49687	1317 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	TY4B-P	A0A0B7P3V8	1104 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	SPB4	P25808	606 aa	Predicted RBP	3.05	□□□□□ -1.92
LCL1	YPL056C	PSO2	P30620	661 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	RTT107	P38850	1070 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	RIO2	P40160	425 aa	Known RBP	3.05	□□□□□ -1.92
LCL1	YPL056C	AIM20	P40451	204 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	CEP3	P40969	608 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	YNR029C	P53729	429 aa	Known RBP	3.05	□□□□□ -1.92
LCL1	YPL056C	RIA1	P53893	1110 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	SAS4	Q04003	481 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	PDS5	Q04264	1277 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	YMR074C	Q04773	145 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	GGA1	Q06336	557 aa		3.05	□□□□□ -1.92
LCL1	YPL056C	PBY1	P38254	753 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	SEC9	P40357	651 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	NDC80	P40460	691 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	MGA2	P40578	1113 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	SUB1	P54000	292 aa	Known RBP	3.04	□□□□□ -1.92
LCL1	YPL056C	SLP1	Q12232	587 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	GIN4	Q12263	1142 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	SFI1	Q12369	946 aa		3.04	□□□□□ -1.92
LCL1	YPL056C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
LCL1	YPL056C	RAD50	P12753	1312 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	KEX2	P13134	814 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	HSC82	P15108	705 aa	Known RBP	3.03	□□□□□ -1.92
LCL1	YPL056C	PHO87	P25360	923 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	DPH5	P32469	300 aa	Predicted RBP	3.03	□□□□□ -1.92
LCL1	YPL056C	ISW1	P38144	1129 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	DSF2	P38213	736 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	OLA1	P38219	394 aa	Known RBP	3.03	□□□□□ -1.92
LCL1	YPL056C	VPS41	P38959	992 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	SIT1	P39980	628 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	ICP55	P40051	511 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	MPH1	P40562	993 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	MTR4	P47047	1073 aa	Known RBP	3.03	□□□□□ -1.92
LCL1	YPL056C	MRX12	P47084	519 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	DNM1	P54861	757 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	PEX19	Q07418	342 aa		3.03	□□□□□ -1.92
LCL1	YPL056C	CFT2	Q12102	859 aa	Predicted RBP	3.03	□□□□□ -1.92
LCL1	YPL056C	SEC14	P24280	304 aa	Known RBP	3.02	□□□□□ -1.93
LCL1	YPL056C	MPE1	P35728	441 aa	Known RBP	3.02	□□□□□ -1.93
LCL1	YPL056C	TPS3	P38426	1054 aa	Known RBP	3.02	□□□□□ -1.93
LCL1	YPL056C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
LCL1	YPL056C	HOS4	P40480	1083 aa		3.02	□□□□□ -1.93
LCL1	YPL056C	APL6	P46682	809 aa		3.02	□□□□□ -1.93
LCL1	YPL056C	KRE33	P53914	1056 aa	Known RBP	3.02	□□□□□ -1.93
LCL1	YPL056C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
LCL1	YPL056C	ARR1	Q06596	294 aa		3.02	□□□□□ -1.93
LCL1	YPL056C	ENT1	Q12518	454 aa		3.02	□□□□□ -1.93
LCL1	YPL056C	RAV1	P47104	1357 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	YML133C	Q03099	1374 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	YLL067C	Q07888	1374 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	YLL066C	Q99208	1374 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	TY4B-H	P0C2J7	1802 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	TY4B-J	P47024	1803 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	CYC8	P14922	966 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	PDI1	P17967	522 aa	Known RBP	3.01	□□□□□ -1.93
LCL1	YPL056C	SUI2	P20459	304 aa	Known RBP	3.01	□□□□□ -1.93
LCL1	YPL056C	RPN12	P32496	274 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	MIC60	P36112	540 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	PIM1	P36775	1133 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	BRN1	P38170	754 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	ILV3	P39522	585 aa	Known RBP	3.01	□□□□□ -1.93
LCL1	YPL056C	RRT14	P40470	206 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	CIR1	P42940	261 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	NOP7	P53261	605 aa	Known RBP	3.01	□□□□□ -1.93
LCL1	YPL056C	UBX2	Q04228	584 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	PSR1	Q07800	427 aa		3.01	□□□□□ -1.93
LCL1	YPL056C	MLP1	Q02455	1875 aa	Known RBP	3.01	□□□□□ -1.93
LCL1	YPL056C	SWI6	P09959	803 aa		3	□□□□□ -1.93
LCL1	YPL056C	SRS2	P12954	1174 aa		3	□□□□□ -1.93
LCL1	YPL056C	MRC1	P25588	1096 aa		3	□□□□□ -1.93
LCL1	YPL056C	NUF2	P33895	451 aa		3	□□□□□ -1.93
LCL1	YPL056C	GDT1	P38301	280 aa	Predicted RBP	3	□□□□□ -1.93
LCL1	YPL056C	RFC1	P38630	861 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	BDH2	P39713	417 aa		3	□□□□□ -1.93
LCL1	YPL056C	RVS167	P39743	482 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	SAP1	P39955	897 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	MVP1	P40959	511 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	CCM1	P48237	864 aa	Predicted RBP	3	□□□□□ -1.93
LCL1	YPL056C	INP52	P50942	1183 aa		3	□□□□□ -1.93
LCL1	YPL056C	JJJ1	P53863	590 aa		3	□□□□□ -1.93
LCL1	YPL056C	STE20	Q03497	939 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	INP2	Q03824	705 aa		3	□□□□□ -1.93
LCL1	YPL056C	ARO80	Q04052	950 aa		3	□□□□□ -1.93
LCL1	YPL056C	IMH1	Q06704	911 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	GLE1	Q12315	538 aa		3	□□□□□ -1.93
LCL1	YPL056C	VPS5	Q92331	675 aa		3	□□□□□ -1.93
LCL1	YPL056C	DUR1,2	P32528	1835 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	URB1	P34241	1764 aa	Known RBP	3	□□□□□ -1.93
LCL1	YPL056C	MRPS28	P21771	286 aa		2.99	□□□□□ -1.93
LCL1	YPL056C	RPL5	P26321	297 aa	Known RBP	2.99	□□□□□ -1.93
LCL1	YPL056C	BRF1	P29056	596 aa		2.99	□□□□□ -1.93
LCL1	YPL056C	ELM1	P32801	640 aa		2.99	□□□□□ -1.93
LCL1	YPL056C	NPR3	P38742	1146 aa		2.99	□□□□□ -1.93
LCL1	YPL056C	BRL1	P38770	471 aa		2.99	□□□□□ -1.93
LCL1	YPL056C	HST2	P53686	357 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms