RNA–Protein interactions for RNA: YMR297W

PRC1, Transcript of Vacuolar carboxypeptidase Y (proteinase C, CPY), yeastyeast

Gene PRC1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRC1YMR297W YCG1Q06680 1035 aa8.52□□□□□ -1.04
PRC1YMR297W ATG9Q12142 997 aa8.52□□□□□ -1.04
PRC1YMR297W TFC8Q12308 588 aa8.52□□□□□ -1.04
PRC1YMR297W CPA2P03965 1118 aaKnown RBP8.52□□□□□ -1.05
PRC1YMR297W ARD1P07347 238 aaPredicted RBP8.52□□□□□ -1.05
PRC1YMR297W DPB3P27344 201 aa8.52□□□□□ -1.05
PRC1YMR297W MUD2P36084 527 aaKnown RBP8.52□□□□□ -1.05
PRC1YMR297W SAP1P39955 897 aaKnown RBP8.52□□□□□ -1.05
PRC1YMR297W YER130CP39959 443 aa8.52□□□□□ -1.05
PRC1YMR297W APT1P49435 187 aaKnown RBP8.52□□□□□ -1.05
PRC1YMR297W RTF1P53064 558 aa8.52□□□□□ -1.05
PRC1YMR297W HOT1Q03213 719 aa8.52□□□□□ -1.05
PRC1YMR297W AOS1Q06624 347 aa8.52□□□□□ -1.05
PRC1YMR297W APL4Q12028 832 aa8.52□□□□□ -1.05
PRC1YMR297W TSR3Q12094 313 aaKnown RBP8.52□□□□□ -1.05
PRC1YMR297W RPO26P20435 155 aa8.51□□□□□ -1.05
PRC1YMR297W RDS1P25611 832 aa8.51□□□□□ -1.05
PRC1YMR297W PUP2P32379 260 aa8.51□□□□□ -1.05
PRC1YMR297W TYS1P36421 394 aaKnown RBP8.51□□□□□ -1.05
PRC1YMR297W REI1P38344 393 aaPredicted RBP8.51□□□□□ -1.05
PRC1YMR297W SPT8P38915 602 aa8.51□□□□□ -1.05
PRC1YMR297W NDC80P40460 691 aa8.51□□□□□ -1.05
PRC1YMR297W TFG2P41896 400 aaPredicted RBP8.51□□□□□ -1.05
PRC1YMR297W ZDS1P50111 915 aaKnown RBP8.51□□□□□ -1.05
PRC1YMR297W VMS1Q04311 632 aaKnown RBP8.51□□□□□ -1.05
PRC1YMR297W DPH5P32469 300 aaPredicted RBP8.5□□□□□ -1.05
PRC1YMR297W YBR287WP38355 427 aa8.5□□□□□ -1.05
PRC1YMR297W YDR338CQ05497 695 aa8.5□□□□□ -1.05
PRC1YMR297W CDC15P27636 974 aa8.49□□□□□ -1.05
PRC1YMR297W SRP40P32583 406 aaPredicted RBP8.49□□□□□ -1.05
PRC1YMR297W AAP1P37898 856 aaKnown RBP8.49□□□□□ -1.05
PRC1YMR297W OLA1P38219 394 aaKnown RBP8.49□□□□□ -1.05
PRC1YMR297W MAM1P40065 302 aa8.49□□□□□ -1.05
PRC1YMR297W MGA2P40578 1113 aa8.49□□□□□ -1.05
PRC1YMR297W MAL13P53338 473 aa8.49□□□□□ -1.05
PRC1YMR297W DNM1P54861 757 aa8.49□□□□□ -1.05
PRC1YMR297W TPM1P17536 199 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W GSY2P27472 705 aa8.48□□□□□ -1.05
PRC1YMR297W HEL1P36113 551 aa8.48□□□□□ -1.05
PRC1YMR297W AKL1P38080 1108 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W STR2P47164 639 aa8.48□□□□□ -1.05
PRC1YMR297W YPT11P48559 417 aa8.48□□□□□ -1.05
PRC1YMR297W SFH1Q06168 426 aa8.48□□□□□ -1.05
PRC1YMR297W RAD24P32641 659 aa8.48□□□□□ -1.05
PRC1YMR297W ECM32P32644 1121 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W TPS3P38426 1054 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W SEC26P41810 973 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W ENT3P47160 408 aa8.48□□□□□ -1.05
PRC1YMR297W SPO19Q03029 223 aa8.48□□□□□ -1.05
PRC1YMR297W ATG23Q06671 453 aa8.48□□□□□ -1.05
PRC1YMR297W RIM20Q12033 661 aa8.48□□□□□ -1.05
PRC1YMR297W ELG1Q12050 791 aa8.48□□□□□ -1.05
PRC1YMR297W YPL150WQ12152 901 aa8.48□□□□□ -1.05
PRC1YMR297W RUD3Q12234 484 aaKnown RBP8.48□□□□□ -1.05
PRC1YMR297W CDC60P26637 1090 aaKnown RBP8.47□□□□□ -1.05
PRC1YMR297W PPH3P32345 308 aa8.47□□□□□ -1.05
PRC1YMR297W YME2P32843 850 aa8.47□□□□□ -1.05
PRC1YMR297W CAJ1P39101 391 aa8.47□□□□□ -1.05
PRC1YMR297W NOC2P39744 710 aaKnown RBP8.47□□□□□ -1.05
PRC1YMR297W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
PRC1YMR297W VPS75P53853 264 aa8.47□□□□□ -1.05
PRC1YMR297W RCM1P53972 490 aa8.47□□□□□ -1.05
PRC1YMR297W SDH5Q08230 162 aa8.47□□□□□ -1.05
PRC1YMR297W YOR223WQ12015 292 aa8.47□□□□□ -1.05
PRC1YMR297W YVC1Q12324 675 aa8.47□□□□□ -1.05
PRC1YMR297W APC1P53886 1748 aa8.47□□□□□ -1.05
PRC1YMR297W ADE6P38972 1358 aaKnown RBP8.46□□□□□ -1.06
PRC1YMR297W PRP16P15938 1071 aaPredicted RBP8.46□□□□□ -1.06
PRC1YMR297W MRPS28P21771 286 aa8.46□□□□□ -1.06
PRC1YMR297W HOS4P40480 1083 aa8.46□□□□□ -1.06
PRC1YMR297W HUL4P40985 892 aa8.46□□□□□ -1.06
PRC1YMR297W YJR142WP47173 342 aa8.46□□□□□ -1.06
PRC1YMR297W YGR122WP53272 402 aa8.46□□□□□ -1.06
PRC1YMR297W CAF130P53280 1122 aaPredicted RBP8.46□□□□□ -1.06
PRC1YMR297W STE23Q06010 1027 aa8.46□□□□□ -1.06
PRC1YMR297W SMC6Q12749 1114 aa8.46□□□□□ -1.06
PRC1YMR297W KAR3P17119 729 aa8.45□□□□□ -1.06
PRC1YMR297W DAL7P21826 554 aa8.45□□□□□ -1.06
PRC1YMR297W YEL043WP32618 956 aa8.45□□□□□ -1.06
PRC1YMR297W MAL33P38157 468 aa8.45□□□□□ -1.06
PRC1YMR297W PSY4P38193 441 aa8.45□□□□□ -1.06
PRC1YMR297W ALD2P47771 506 aa8.45□□□□□ -1.06
PRC1YMR297W RMD1Q03441 430 aa8.45□□□□□ -1.06
PRC1YMR297W YSH1Q06224 779 aaPredicted RBP8.45□□□□□ -1.06
PRC1YMR297W SLP1Q12232 587 aa8.45□□□□□ -1.06
PRC1YMR297W LEU2P04173 364 aaPredicted RBP8.44□□□□□ -1.06
PRC1YMR297W UBX2Q04228 584 aa8.44□□□□□ -1.06
PRC1YMR297W RRP5Q05022 1729 aaKnown RBP8.44□□□□□ -1.06
PRC1YMR297W YRF1-2P40105 1681 aa8.44□□□□□ -1.06
PRC1YMR297W PRE10P21242 288 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
PRC1YMR297W RRP43P25359 394 aaPredicted RBP8.44□□□□□ -1.06
PRC1YMR297W IPL1P38991 367 aa8.44□□□□□ -1.06
PRC1YMR297W VPS8P39702 1274 aa8.44□□□□□ -1.06
PRC1YMR297W SEC9P40357 651 aa8.44□□□□□ -1.06
PRC1YMR297W HGH1P48362 394 aaKnown RBP8.44□□□□□ -1.06
PRC1YMR297W ORM2Q06144 216 aa8.44□□□□□ -1.06
PRC1YMR297W LCB5Q06147 687 aaKnown RBP8.44□□□□□ -1.06
PRC1YMR297W CMS1Q07897 291 aaKnown RBP8.44□□□□□ -1.06
PRC1YMR297W PSK2Q08217 1101 aa8.44□□□□□ -1.06
PRC1YMR297W PMR1P13586 950 aa8.43□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms