RNA–Protein interactions for RNA: YMR297W

PRC1, Transcript of Vacuolar carboxypeptidase Y (proteinase C, CPY), yeastyeast

Gene PRC1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRC1YMR297W SPA2P23201 1466 aaKnown RBP11.62□□□□□ -0.55
PRC1YMR297W SGS1P35187 1447 aa11.48□□□□□ -0.57
PRC1YMR297W SSN2P38931 1420 aa11.39□□□□□ -0.59
PRC1YMR297W SKI3P17883 1432 aaKnown RBP11.18□□□□□ -0.62
PRC1YMR297W NOP2P40991 618 aaKnown RBP11.09□□□□□ -0.63
PRC1YMR297W DRS1P32892 752 aaKnown RBP11.08□□□□□ -0.64
PRC1YMR297W BFR2Q06631 534 aaKnown RBP11.07□□□□□ -0.64
PRC1YMR297W INO80P53115 1489 aa11.06□□□□□ -0.64
PRC1YMR297W MON2P48563 1636 aaPredicted RBP10.98□□□□□ -0.65
PRC1YMR297W NSR1P27476 414 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
PRC1YMR297W CHD1P32657 1468 aa10.64□□□□□ -0.71
PRC1YMR297W MMS22Q06164 1454 aa10.64□□□□□ -0.71
PRC1YMR297W TCB3Q03640 1545 aaKnown RBP10.52□□□□□ -0.73
PRC1YMR297W DNA2P38859 1522 aa10.48□□□□□ -0.73
PRC1YMR297W UFD4P33202 1483 aa10.47□□□□□ -0.73
PRC1YMR297W XRN1P22147 1528 aaKnown RBP10.46□□□□□ -0.73
PRC1YMR297W RSE1Q04693 1361 aaKnown RBP10.46□□□□□ -0.74
PRC1YMR297W CAB3P36076 571 aa10.38□□□□□ -0.75
PRC1YMR297W ENP1P38333 483 aaKnown RBP10.37□□□□□ -0.75
PRC1YMR297W EBP2P36049 427 aaKnown RBP10.36□□□□□ -0.75
PRC1YMR297W RQC2Q12532 1038 aaKnown RBP10.35□□□□□ -0.75
PRC1YMR297W HSL1P34244 1518 aa10.32□□□□□ -0.76
PRC1YMR297W TY1B-DR4Q07793 1604 aa10.31□□□□□ -0.76
PRC1YMR297W SPP41P38904 1435 aa10.31□□□□□ -0.76
PRC1YMR297W TRM732Q03496 1420 aa10.3□□□□□ -0.76
PRC1YMR297W KOG1P38873 1557 aa10.28□□□□□ -0.76
PRC1YMR297W SPT6P23615 1451 aaKnown RBP10.26□□□□□ -0.77
PRC1YMR297W IKI3Q06706 1349 aaKnown RBP10.25□□□□□ -0.77
PRC1YMR297W SWR1Q05471 1514 aa10.24□□□□□ -0.77
PRC1YMR297W THO2P53552 1597 aaKnown RBP10.2□□□□□ -0.78
PRC1YMR297W STH1P32597 1359 aa10.2□□□□□ -0.78
PRC1YMR297W YPR148CQ06523 435 aa10.18□□□□□ -0.78
PRC1YMR297W HIR3P47171 1648 aa10.18□□□□□ -0.78
PRC1YMR297W REV3P14284 1504 aa10.17□□□□□ -0.78
PRC1YMR297W STU1P38198 1513 aa10.17□□□□□ -0.78
PRC1YMR297W MYO2P19524 1574 aaKnown RBP10.17□□□□□ -0.78
PRC1YMR297W POL5P39985 1022 aaKnown RBP10.17□□□□□ -0.78
PRC1YMR297W SIN3P22579 1536 aa10.15□□□□□ -0.78
PRC1YMR297W TFA1P36100 482 aa10.15□□□□□ -0.78
PRC1YMR297W SAS10Q12136 610 aaPredicted RBP10.14□□□□□ -0.79
PRC1YMR297W SSK2P53599 1579 aa10.13□□□□□ -0.79
PRC1YMR297W SPT7P35177 1332 aa10.11□□□□□ -0.79
PRC1YMR297W YTA7P40340 1379 aa10.1□□□□□ -0.79
PRC1YMR297W SEC3P33332 1336 aaKnown RBP10.09□□□□□ -0.79
PRC1YMR297W NUP170P38181 1502 aa10.08□□□□□ -0.8
PRC1YMR297W ECM5Q03214 1411 aa10.08□□□□□ -0.8
PRC1YMR297W SSM4P40318 1319 aa10.08□□□□□ -0.8
PRC1YMR297W POL1P13382 1468 aa10.06□□□□□ -0.8
PRC1YMR297W TAF2P23255 1407 aa10.06□□□□□ -0.8
PRC1YMR297W BPT1P14772 1559 aa10.04□□□□□ -0.8
PRC1YMR297W MTC1P47018 478 aaKnown RBP10.03□□□□□ -0.8
PRC1YMR297W SCC2Q04002 1493 aa10.03□□□□□ -0.8
PRC1YMR297W PRS1P32895 427 aaKnown RBP10.02□□□□□ -0.81
PRC1YMR297W ESP1Q03018 1630 aa9.98□□□□□ -0.81
PRC1YMR297W TAF7Q05021 590 aa9.95□□□□□ -0.82
PRC1YMR297W PDR10P51533 1564 aa9.93□□□□□ -0.82
PRC1YMR297W RTT106P40161 455 aa9.92□□□□□ -0.82
PRC1YMR297W MYO4P32492 1471 aa9.91□□□□□ -0.82
PRC1YMR297W PEP1P32319 1579 aa9.89□□□□□ -0.83
PRC1YMR297W MLP2P40457 1679 aa9.88□□□□□ -0.83
PRC1YMR297W PAN1P32521 1480 aa9.88□□□□□ -0.83
PRC1YMR297W BUD4P47136 1447 aa9.88□□□□□ -0.83
PRC1YMR297W SMC4Q12267 1418 aa9.87□□□□□ -0.83
PRC1YMR297W SIS2P36024 562 aa9.86□□□□□ -0.83
PRC1YMR297W YOR1P53049 1477 aa9.85□□□□□ -0.83
PRC1YMR297W CLC1P17891 233 aa9.84□□□□□ -0.83
PRC1YMR297W SRB8P25648 1427 aa9.83□□□□□ -0.84
PRC1YMR297W IME2P32581 645 aa9.83□□□□□ -0.84
PRC1YMR297W SNQ2P32568 1501 aaKnown RBP9.83□□□□□ -0.84
PRC1YMR297W RKR1Q04781 1562 aa9.81□□□□□ -0.84
PRC1YMR297W YPK9Q12697 1472 aa9.8□□□□□ -0.84
PRC1YMR297W TCB2P48231 1178 aa9.8□□□□□ -0.84
PRC1YMR297W CFT1Q06632 1357 aaKnown RBP9.8□□□□□ -0.84
PRC1YMR297W YLR419WQ06698 1435 aaKnown RBP9.79□□□□□ -0.84
PRC1YMR297W YCF1P39109 1515 aaKnown RBP9.78□□□□□ -0.84
PRC1YMR297W LEU3P08638 886 aa9.78□□□□□ -0.84
PRC1YMR297W TSC11P40061 1430 aa9.78□□□□□ -0.84
PRC1YMR297W GEA1P47102 1408 aaPredicted RBP9.76□□□□□ -0.85
PRC1YMR297W MNN4P36044 1178 aa9.73□□□□□ -0.85
PRC1YMR297W OPY1P38271 328 aa9.72□□□□□ -0.85
PRC1YMR297W YFR016CP43597 1233 aaKnown RBP9.72□□□□□ -0.85
PRC1YMR297W PDR15Q04182 1529 aaKnown RBP9.71□□□□□ -0.85
PRC1YMR297W IFH1P39520 1085 aa9.71□□□□□ -0.86
PRC1YMR297W PSD2P53037 1138 aaKnown RBP9.71□□□□□ -0.86
PRC1YMR297W RPC31P17890 251 aa9.69□□□□□ -0.86
PRC1YMR297W EAF7P53911 425 aaKnown RBP9.69□□□□□ -0.86
PRC1YMR297W TOP2P06786 1428 aaKnown RBP9.67□□□□□ -0.86
PRC1YMR297W URN1Q06525 465 aaKnown RBP9.66□□□□□ -0.86
PRC1YMR297W MHP1P43638 1398 aa9.64□□□□□ -0.87
PRC1YMR297W NUP159P40477 1460 aa9.64□□□□□ -0.87
PRC1YMR297W ATG2P53855 1592 aa9.63□□□□□ -0.87
PRC1YMR297W LEO1P38439 464 aa9.62□□□□□ -0.87
PRC1YMR297W IRC20Q06554 1556 aa9.61□□□□□ -0.87
PRC1YMR297W TY3B-GQ99315 1547 aa9.6□□□□□ -0.87
PRC1YMR297W ULS1Q08562 1619 aa9.6□□□□□ -0.87
PRC1YMR297W RPO31P04051 1460 aa9.59□□□□□ -0.87
PRC1YMR297W VPS15P22219 1454 aa9.59□□□□□ -0.87
PRC1YMR297W SNF7P39929 240 aaKnown RBP9.58□□□□□ -0.88
PRC1YMR297W DNF1P32660 1571 aa9.56□□□□□ -0.88
PRC1YMR297W FUN12P39730 1002 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms