RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	HAL5	P38970	855 aa	Known RBP	11.85	□□□□□ -0.51
TIR3	YIL011W	TIF4632	P39936	914 aa	Known RBP	11.85	□□□□□ -0.51
TIR3	YIL011W	EPS1	P40557	701 aa		11.85	□□□□□ -0.51
TIR3	YIL011W	DUR1,2	P32528	1835 aa	Known RBP	11.85	□□□□□ -0.51
TIR3	YIL011W	TOP1	P04786	769 aa		11.84	□□□□□ -0.51
TIR3	YIL011W	GLO3	P38682	493 aa	Known RBP	11.84	□□□□□ -0.51
TIR3	YIL011W	PIB2	P53191	635 aa		11.84	□□□□□ -0.51
TIR3	YIL011W	YIR042C	P40586	236 aa		11.83	□□□□□ -0.52
TIR3	YIL011W	ENP2	P48234	707 aa	Known RBP	11.83	□□□□□ -0.52
TIR3	YIL011W	INM2	Q05533	292 aa		11.83	□□□□□ -0.52
TIR3	YIL011W	PSF3	Q12146	194 aa		11.83	□□□□□ -0.52
TIR3	YIL011W	LCB1	P25045	558 aa	Known RBP	11.82	□□□□□ -0.52
TIR3	YIL011W	HXT13	P39924	564 aa		11.82	□□□□□ -0.52
TIR3	YIL011W	JJJ2	P46997	583 aa		11.82	□□□□□ -0.52
TIR3	YIL011W	HXT17	P53631	564 aa		11.82	□□□□□ -0.52
TIR3	YIL011W	RPT3	P33298	428 aa	Known RBP	11.81	□□□□□ -0.52
TIR3	YIL011W	AAP1	P37898	856 aa	Known RBP	11.81	□□□□□ -0.52
TIR3	YIL011W	YMR147W	P40218	223 aa	Known RBP	11.81	□□□□□ -0.52
TIR3	YIL011W	FIG2	P25653	1609 aa		11.81	□□□□□ -0.52
TIR3	YIL011W	FAS2	P19097	1887 aa	Known RBP	11.8	□□□□□ -0.52
TIR3	YIL011W	YIR014W	P40570	242 aa		11.8	□□□□□ -0.52
TIR3	YIL011W	SET4	P42948	560 aa		11.8	□□□□□ -0.52
TIR3	YIL011W	GSM1	P42950	618 aa		11.8	□□□□□ -0.52
TIR3	YIL011W	TPM1	P17536	199 aa	Known RBP	11.79	□□□□□ -0.52
TIR3	YIL011W	YFH7	P43591	353 aa		11.79	□□□□□ -0.52
TIR3	YIL011W	HKR1	P41809	1802 aa		11.79	□□□□□ -0.52
TIR3	YIL011W	CYB2	P00175	591 aa		11.78	□□□□□ -0.52
TIR3	YIL011W	RPS9B	P05755	195 aa	Known RBP	11.78	□□□□□ -0.52
TIR3	YIL011W	OPI1	P21957	404 aa		11.78	□□□□□ -0.52
TIR3	YIL011W	PTK1	P36002	662 aa	Predicted RBP	11.78	□□□□□ -0.52
TIR3	YIL011W	SHC1	P39000	512 aa		11.78	□□□□□ -0.52
TIR3	YIL011W	PRP42	Q03776	544 aa	Known RBP	11.78	□□□□□ -0.52
TIR3	YIL011W	DPL1	Q05567	589 aa		11.78	□□□□□ -0.52
TIR3	YIL011W	TOS4	Q06266	489 aa		11.78	□□□□□ -0.52
TIR3	YIL011W	MDL2	P33311	773 aa		11.77	□□□□□ -0.53
TIR3	YIL011W	KRI1	P42846	591 aa	Known RBP	11.77	□□□□□ -0.53
TIR3	YIL011W	IRC8	P47046	822 aa		11.77	□□□□□ -0.53
TIR3	YIL011W	WRS1	Q12109	432 aa	Known RBP	11.77	□□□□□ -0.53
TIR3	YIL011W	RRG1	Q12167	365 aa	Predicted RBP	11.77	□□□□□ -0.53
TIR3	YIL011W	BOI1	P38041	980 aa	Known RBP	11.76	□□□□□ -0.53
TIR3	YIL011W	GRX7	P38068	203 aa		11.76	□□□□□ -0.53
TIR3	YIL011W	SQS1	P53866	767 aa	Known RBP	11.76	□□□□□ -0.53
TIR3	YIL011W	GAS5	Q08193	484 aa		11.76	□□□□□ -0.53
TIR3	YIL011W	TAH18	Q12181	623 aa		11.76	□□□□□ -0.53
TIR3	YIL011W	GEF1	P37020	779 aa		11.75	□□□□□ -0.53
TIR3	YIL011W	BBC1	P47068	1157 aa		11.75	□□□□□ -0.53
TIR3	YIL011W	DIP2	Q12220	943 aa	Predicted RBP	11.75	□□□□□ -0.53
TIR3	YIL011W	RLF2	Q12495	606 aa		11.75	□□□□□ -0.53
TIR3	YIL011W	ARG82	P07250	355 aa		11.74	□□□□□ -0.53
TIR3	YIL011W	NPL4	P33755	580 aa		11.74	□□□□□ -0.53
TIR3	YIL011W	IOC3	P43596	787 aa		11.74	□□□□□ -0.53
TIR3	YIL011W	LAM4	P38800	1345 aa		11.73	□□□□□ -0.53
TIR3	YIL011W	RRP8	P38961	392 aa	Known RBP	11.73	□□□□□ -0.53
TIR3	YIL011W	PKH3	Q03306	898 aa	Predicted RBP	11.73	□□□□□ -0.53
TIR3	YIL011W	KAR5	Q04746	504 aa		11.73	□□□□□ -0.53
TIR3	YIL011W	RNR2	P09938	399 aa	Known RBP	11.72	□□□□□ -0.53
TIR3	YIL011W	SSA1	P10591	642 aa	Known RBP	11.72	□□□□□ -0.53
TIR3	YIL011W	MSM1	P22438	575 aa		11.72	□□□□□ -0.53
TIR3	YIL011W	AFG2	P32794	780 aa		11.72	□□□□□ -0.53
TIR3	YIL011W	MET1	P36150	593 aa		11.72	□□□□□ -0.53
TIR3	YIL011W	PIP2	P52960	996 aa		11.72	□□□□□ -0.53
TIR3	YIL011W	SEN54	Q02825	467 aa	Predicted RBP	11.72	□□□□□ -0.53
TIR3	YIL011W	ATG20	Q07528	640 aa		11.72	□□□□□ -0.53
TIR3	YIL011W	APL6	P46682	809 aa		11.71	□□□□□ -0.53
TIR3	YIL011W	PUS6	P53294	404 aa		11.71	□□□□□ -0.53
TIR3	YIL011W	ACK1	Q07622	623 aa	Predicted RBP	11.71	□□□□□ -0.53
TIR3	YIL011W	SSF2	Q12153	453 aa	Predicted RBP	11.71	□□□□□ -0.53
TIR3	YIL011W	RPS7A	P26786	190 aa	Known RBP	11.7	□□□□□ -0.54
TIR3	YIL011W	CIC1	P38779	376 aa	Known RBP	11.7	□□□□□ -0.54
TIR3	YIL011W	FPK1	P53739	893 aa		11.7	□□□□□ -0.54
TIR3	YIL011W	CRF1	Q04930	467 aa		11.7	□□□□□ -0.54
TIR3	YIL011W	TRL1	P09880	827 aa	Known RBP	11.69	□□□□□ -0.54
TIR3	YIL011W	PCT1	P13259	424 aa		11.69	□□□□□ -0.54
TIR3	YIL011W	SLI15	P38283	698 aa		11.69	□□□□□ -0.54
TIR3	YIL011W	SLN1	P39928	1220 aa	Predicted RBP	11.69	□□□□□ -0.54
TIR3	YIL011W	SNF3	P10870	884 aa		11.68	□□□□□ -0.54
TIR3	YIL011W	SRS2	P12954	1174 aa		11.68	□□□□□ -0.54
TIR3	YIL011W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.68	□□□□□ -0.54	not detected
TIR3	YIL011W	OPY1	P38271	328 aa		11.68	□□□□□ -0.54
TIR3	YIL011W	SPO22	P40511	975 aa		11.68	□□□□□ -0.54
TIR3	YIL011W	ESF1	Q06344	628 aa	Known RBP	11.68	□□□□□ -0.54
TIR3	YIL011W	PPM2	Q08282	695 aa		11.68	□□□□□ -0.54
TIR3	YIL011W	PGA3	Q12746	312 aa	Known RBP	11.68	□□□□□ -0.54
TIR3	YIL011W	COQ1	P18900	473 aa		11.67	□□□□□ -0.54
TIR3	YIL011W	IMP2'	P32351	346 aa		11.67	□□□□□ -0.54
TIR3	YIL011W	TRM44	Q02648	567 aa	Known RBP	11.67	□□□□□ -0.54
TIR3	YIL011W	FLO11	P08640	1367 aa		11.67	□□□□□ -0.54
TIR3	YIL011W	SIS2	P36024	562 aa		11.66	□□□□□ -0.54
TIR3	YIL011W	AIM9	P40053	627 aa	Known RBP	11.66	□□□□□ -0.54
TIR3	YIL011W	MRD1	Q06106	887 aa	Known RBP	11.66	□□□□□ -0.54
TIR3	YIL011W	PEP3	P27801	918 aa		11.65	□□□□□ -0.54
TIR3	YIL011W	ARP5	P53946	755 aa		11.65	□□□□□ -0.54
TIR3	YIL011W	SPN1	Q06505	410 aa	Predicted RBP	11.65	□□□□□ -0.54
TIR3	YIL011W	CRG1	P38892	291 aa	RIP-Chip data	11.64	□□□□□ -0.55	not detected
TIR3	YIL011W	UFD2	P54860	961 aa		11.64	□□□□□ -0.55
TIR3	YIL011W	YPL260W	Q08977	551 aa		11.64	□□□□□ -0.55
TIR3	YIL011W	RTS1	P38903	757 aa		11.63	□□□□□ -0.55
TIR3	YIL011W	VPS4	P52917	437 aa		11.63	□□□□□ -0.55
TIR3	YIL011W	RPS15	Q01855	142 aa	Known RBP	11.63	□□□□□ -0.55
TIR3	YIL011W	AIM7	Q12156	149 aa		11.63	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms