RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	MLF3	P32047	452 aa		10.29	□□□□□ -0.76
URH1	YDR400W	KTR2	P33550	425 aa		10.29	□□□□□ -0.76
URH1	YDR400W	JJJ2	P46997	583 aa		10.29	□□□□□ -0.76
URH1	YDR400W	SUT1	P53032	299 aa	Known RBP	10.29	□□□□□ -0.76
URH1	YDR400W	TOP2	P06786	1428 aa	Known RBP	10.29	□□□□□ -0.76
URH1	YDR400W	RKR1	Q04781	1562 aa		10.29	□□□□□ -0.76
URH1	YDR400W	UFD4	P33202	1483 aa		10.29	□□□□□ -0.76
URH1	YDR400W	SHM1	P37292	490 aa	Predicted RBP	10.28	□□□□□ -0.76
URH1	YDR400W	MSN5	P52918	1224 aa		10.28	□□□□□ -0.76
URH1	YDR400W	YCF1	P39109	1515 aa	Known RBP	10.28	□□□□□ -0.76
URH1	YDR400W	BPT1	P14772	1559 aa		10.27	□□□□□ -0.76
URH1	YDR400W	VMA3	P25515	160 aa		10.27	□□□□□ -0.77
URH1	YDR400W	TRS120	Q04183	1289 aa		10.27	□□□□□ -0.77
URH1	YDR400W	TY1A-DR3	Q12441	440 aa		10.26	□□□□□ -0.77
URH1	YDR400W	POL32	P47110	350 aa		10.25	□□□□□ -0.77
URH1	YDR400W	UTP4	Q06679	776 aa	Known RBP	10.25	□□□□□ -0.77
URH1	YDR400W	RPS31	P05759	152 aa	Known RBP	10.24	□□□□□ -0.77
URH1	YDR400W	ATE1	P16639	503 aa		10.24	□□□□□ -0.77
URH1	YDR400W	AHP1	P38013	176 aa	Known RBP	10.24	□□□□□ -0.77
URH1	YDR400W	YJR098C	P47139	656 aa		10.24	□□□□□ -0.77
URH1	YDR400W	RRP15	Q06511	250 aa	Predicted RBP	10.24	□□□□□ -0.77
URH1	YDR400W	SMC4	Q12267	1418 aa		10.24	□□□□□ -0.77
URH1	YDR400W	ASF1	P32447	279 aa		10.23	□□□□□ -0.77
URH1	YDR400W	NUP85	P46673	744 aa		10.23	□□□□□ -0.77
URH1	YDR400W	SNU71	P53207	620 aa	Known RBP	10.23	□□□□□ -0.77
URH1	YDR400W	GPI13	Q07830	1017 aa		10.23	□□□□□ -0.77
URH1	YDR400W	TY2B-LR1	P0C2J3	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-F	P0CX63	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-GR2	P0CX64	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-C	P25384	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-DR2	Q03494	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY1B-DR1	Q03855	1755 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-DR3	Q07791	1770 aa	Known RBP	10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-OR1	Q12113	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-DR1	Q12472	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TY2B-OR2	Q12501	1770 aa		10.22	□□□□□ -0.77
URH1	YDR400W	IRE1	P32361	1115 aa		10.22	□□□□□ -0.77
URH1	YDR400W	MET4	P32389	672 aa		10.22	□□□□□ -0.77
URH1	YDR400W	SLA1	P32790	1244 aa		10.22	□□□□□ -0.77
URH1	YDR400W	ALD2	P47771	506 aa		10.22	□□□□□ -0.77
URH1	YDR400W	TRK1	P12685	1235 aa		10.21	□□□□□ -0.77
URH1	YDR400W	DAL1	P32375	460 aa		10.21	□□□□□ -0.77
URH1	YDR400W	QDR2	P40474	542 aa		10.21	□□□□□ -0.77
URH1	YDR400W	LSC2	P53312	427 aa		10.21	□□□□□ -0.77
URH1	YDR400W	UFD2	P54860	961 aa		10.21	□□□□□ -0.77
URH1	YDR400W	MYO4	P32492	1471 aa		10.2	□□□□□ -0.78
URH1	YDR400W	LDH1	P38139	375 aa		10.2	□□□□□ -0.78
URH1	YDR400W	MNL2	Q12205	849 aa		10.2	□□□□□ -0.78
URH1	YDR400W	YTA6	P40328	754 aa		10.19	□□□□□ -0.78
URH1	YDR400W	HXT8	P40886	569 aa		10.19	□□□□□ -0.78
URH1	YDR400W	VTC4	P47075	721 aa		10.19	□□□□□ -0.78
URH1	YDR400W	SRC1	Q03707	834 aa		10.18	□□□□□ -0.78
URH1	YDR400W	TY1B-DR3	Q99231	1755 aa		10.18	□□□□□ -0.78
URH1	YDR400W	PSH1	Q12161	406 aa		10.17	□□□□□ -0.78
URH1	YDR400W	TCB1	Q12466	1186 aa		10.17	□□□□□ -0.78
URH1	YDR400W	PDC6	P26263	563 aa	Known RBP	10.16	□□□□□ -0.78
URH1	YDR400W	DYS1	P38791	387 aa		10.16	□□□□□ -0.78
URH1	YDR400W	RGA1	P39083	1007 aa		10.16	□□□□□ -0.78
URH1	YDR400W	MTO1	P53070	669 aa		10.16	□□□□□ -0.78
URH1	YDR400W	KAP122	P32767	1081 aa		10.15	□□□□□ -0.78
URH1	YDR400W	SMC1	P32908	1225 aa		10.14	□□□□□ -0.79
URH1	YDR400W	MSN1	P22148	382 aa		10.13	□□□□□ -0.79
URH1	YDR400W	PAM1	P37304	830 aa	Known RBP	10.13	□□□□□ -0.79
URH1	YDR400W	NOP7	P53261	605 aa	Known RBP	10.13	□□□□□ -0.79
URH1	YDR400W	TY2B-B	Q12491	1770 aa		10.13	□□□□□ -0.79
URH1	YDR400W	BRE2	P43132	505 aa		10.12	□□□□□ -0.79
URH1	YDR400W	PHO4	P07270	312 aa	Known RBP	10.11	□□□□□ -0.79
URH1	YDR400W	BSD2	P38356	321 aa		10.11	□□□□□ -0.79
URH1	YDR400W	RAD55	P38953	406 aa		10.11	□□□□□ -0.79
URH1	YDR400W	RGD2	P43556	714 aa		10.11	□□□□□ -0.79
URH1	YDR400W	YNL011C	P53980	444 aa		10.11	□□□□□ -0.79
URH1	YDR400W	LEU1	P07264	779 aa	Known RBP	10.1	□□□□□ -0.79
URH1	YDR400W	RPC31	P17890	251 aa		10.1	□□□□□ -0.79
URH1	YDR400W	SEC8	P32855	1065 aa		10.1	□□□□□ -0.79
URH1	YDR400W	MGE1	P38523	228 aa		10.1	□□□□□ -0.79
URH1	YDR400W	STB3	Q12427	513 aa		10.1	□□□□□ -0.79
URH1	YDR400W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	10.09	□□□□□ -0.79	not detected
URH1	YDR400W	FIR1	P40020	876 aa		10.09	□□□□□ -0.79
URH1	YDR400W	CDC55	Q00362	526 aa		10.09	□□□□□ -0.79
URH1	YDR400W	TY1B-BR	Q12193	1756 aa		10.09	□□□□□ -0.79
URH1	YDR400W	TY1B-GR3	Q12316	1755 aa		10.09	□□□□□ -0.79
URH1	YDR400W	TY1B-OR	Q92393	1755 aa		10.09	□□□□□ -0.79
URH1	YDR400W	NTA1	P40354	457 aa		10.08	□□□□□ -0.8
URH1	YDR400W	OYE2	Q03558	400 aa	Known RBP	10.08	□□□□□ -0.8
URH1	YDR400W	OPT2	Q06593	877 aa		10.08	□□□□□ -0.8
URH1	YDR400W	TIF6	Q12522	245 aa	Known RBP	10.08	□□□□□ -0.8
URH1	YDR400W	TY1B-H	O13535	1793 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-DR5	P0C2I2	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-DR6	P0C2I3	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-LR2	P0C2I5	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-PR2	P0C2J0	1756 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-JR1	P47098	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-ML2	Q03434	1755 aa	Known RBP	10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-ER1	Q03612	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-ML1	Q04711	1755 aa	Known RBP	10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-GR2	Q12269	1755 aa		10.07	□□□□□ -0.8
URH1	YDR400W	TY1B-OL	Q12273	1755 aa		10.07	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms