RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	DRS1	P32892	752 aa	Known RBP	20.82	■□□□□ 0.92
URH1	YDR400W	MTC1	P47018	478 aa	Known RBP	20.38	■□□□□ 0.85
URH1	YDR400W	BFR2	Q06631	534 aa	Known RBP	18.15	■□□□□ 0.5
URH1	YDR400W	DIP2	Q12220	943 aa	Predicted RBP	17.61	■□□□□ 0.41
URH1	YDR400W	AVT3	P36062	692 aa		17.47	■□□□□ 0.39
URH1	YDR400W	TFA1	P36100	482 aa		17.27	■□□□□ 0.36
URH1	YDR400W	RSE1	Q04693	1361 aa	Known RBP	16.51	■□□□□ 0.23
URH1	YDR400W	ISW2	Q08773	1120 aa		16.48	■□□□□ 0.23
URH1	YDR400W	FAP1	P53971	965 aa		16.37	■□□□□ 0.21
URH1	YDR400W	RPG1	P38249	964 aa	Known RBP	16.3	■□□□□ 0.2
URH1	YDR400W	PRI1	P10363	409 aa		16.19	■□□□□ 0.18
URH1	YDR400W	RPL17A	P05740	184 aa	Known RBP	15.9	■□□□□ 0.14
URH1	YDR400W	RPL17B	P46990	184 aa	Known RBP	15.9	■□□□□ 0.14
URH1	YDR400W	AAD16	Q02895	342 aa		15.86	■□□□□ 0.13
URH1	YDR400W	REB1	P21538	810 aa		15.65	■□□□□ 0.1
URH1	YDR400W	TSR3	Q12094	313 aa	Known RBP	15.44	■□□□□ 0.06
URH1	YDR400W	SPT21	P35209	758 aa		15.35	■□□□□ 0.05
URH1	YDR400W	PRY3	P47033	881 aa		15.32	■□□□□ 0.04
URH1	YDR400W	RIM101	P33400	625 aa		15.18	■□□□□ 0.02
URH1	YDR400W	PTP3	P40048	928 aa		14.91	□□□□□ -0.02
URH1	YDR400W	RQC2	Q12532	1038 aa	Known RBP	14.87	□□□□□ -0.03
URH1	YDR400W	YKR023W	P36119	530 aa	Known RBP	14.78	□□□□□ -0.04
URH1	YDR400W	MRPL32	P25348	183 aa		14.77	□□□□□ -0.05
URH1	YDR400W	OXP1	P28273	1286 aa		14.76	□□□□□ -0.05
URH1	YDR400W	SSP1	P38871	571 aa		14.64	□□□□□ -0.07
URH1	YDR400W	YAH1	Q12184	172 aa	Known RBP	14.6	□□□□□ -0.07
URH1	YDR400W	YCK3	P39962	524 aa		14.55	□□□□□ -0.08
URH1	YDR400W	HO	P09932	586 aa		14.5	□□□□□ -0.09
URH1	YDR400W	YIL055C	P40523	627 aa	Known RBP	14.5	□□□□□ -0.09
URH1	YDR400W	TFC8	Q12308	588 aa		14.47	□□□□□ -0.09
URH1	YDR400W	DCD1	P06773	312 aa		14.41	□□□□□ -0.1
URH1	YDR400W	HAA1	Q12753	694 aa	Known RBP	14.41	□□□□□ -0.1
URH1	YDR400W	CDC27	P38042	758 aa		14.4	□□□□□ -0.1
URH1	YDR400W	YLR271W	Q06152	274 aa		14.4	□□□□□ -0.1
URH1	YDR400W	DMA1	P38823	416 aa		14.39	□□□□□ -0.11
URH1	YDR400W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	14.35	□□□□□ -0.11	not detected
URH1	YDR400W	RSM7	P47150	247 aa		14.28	□□□□□ -0.12
URH1	YDR400W	MGA2	P40578	1113 aa		14.09	□□□□□ -0.15
URH1	YDR400W	BCH2	P36122	765 aa		14.07	□□□□□ -0.16
URH1	YDR400W	AI2	P03876	854 aa		14.03	□□□□□ -0.16
URH1	YDR400W	CST9	Q06032	482 aa		14	□□□□□ -0.17
URH1	YDR400W	PSD2	P53037	1138 aa	Known RBP	13.97	□□□□□ -0.17
URH1	YDR400W	BBC1	P47068	1157 aa		13.88	□□□□□ -0.19
URH1	YDR400W	EPS1	P40557	701 aa		13.85	□□□□□ -0.19
URH1	YDR400W	SCY1	P53009	804 aa		13.78	□□□□□ -0.2
URH1	YDR400W	BDF1	P35817	686 aa		13.74	□□□□□ -0.21
URH1	YDR400W	MAP2	P38174	421 aa	Known RBP	13.74	□□□□□ -0.21
URH1	YDR400W	UBP10	P53874	792 aa	Predicted RBP	13.69	□□□□□ -0.22
URH1	YDR400W	YGL015C	P33199	130 aa		13.65	□□□□□ -0.22
URH1	YDR400W	MRM1	P25270	412 aa		13.63	□□□□□ -0.23
URH1	YDR400W	RAM2	P29703	316 aa		13.51	□□□□□ -0.25
URH1	YDR400W	RCR1	P38212	213 aa		13.51	□□□□□ -0.25
URH1	YDR400W	SLX5	P32828	619 aa	Known RBP	13.47	□□□□□ -0.25
URH1	YDR400W	SAS10	Q12136	610 aa	Predicted RBP	13.47	□□□□□ -0.25
URH1	YDR400W	RTG3	P38165	486 aa		13.42	□□□□□ -0.26
URH1	YDR400W	VPS29	P38759	282 aa		13.28	□□□□□ -0.28
URH1	YDR400W	SET1	P38827	1080 aa	Known RBP	13.27	□□□□□ -0.29
URH1	YDR400W	MAK11	P20484	414 aa	Known RBP	13.23	□□□□□ -0.29
URH1	YDR400W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
URH1	YDR400W	LEU3	P08638	886 aa		13.11	□□□□□ -0.31
URH1	YDR400W	LEO1	P38439	464 aa		13.11	□□□□□ -0.31
URH1	YDR400W	STS1	P38637	319 aa		13.11	□□□□□ -0.31
URH1	YDR400W	TIF4632	P39936	914 aa	Known RBP	13.11	□□□□□ -0.31
URH1	YDR400W	YPR148C	Q06523	435 aa		13.09	□□□□□ -0.31
URH1	YDR400W	COQ8	P27697	501 aa		13.07	□□□□□ -0.32
URH1	YDR400W	YFR006W	P43590	535 aa		13.07	□□□□□ -0.32
URH1	YDR400W	VPS70	P47161	811 aa		13.07	□□□□□ -0.32
URH1	YDR400W	DBP1	P24784	617 aa	Known RBP	13.05	□□□□□ -0.32
URH1	YDR400W	IFH1	P39520	1085 aa		13.02	□□□□□ -0.33
URH1	YDR400W	YOR238W	Q08634	303 aa		13.02	□□□□□ -0.33
URH1	YDR400W	TGL3	P40308	642 aa		13.01	□□□□□ -0.33
URH1	YDR400W	MIF2	P35201	549 aa		12.99	□□□□□ -0.33
URH1	YDR400W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.96	□□□□□ -0.33	not detected
URH1	YDR400W	EDS1	P38073	919 aa		12.96	□□□□□ -0.33
URH1	YDR400W	CKB1	P43639	278 aa		12.96	□□□□□ -0.33
URH1	YDR400W	PIB1	Q06651	286 aa		12.95	□□□□□ -0.34
URH1	YDR400W	YAP5	P40574	245 aa		12.93	□□□□□ -0.34
URH1	YDR400W	SPB4	P25808	606 aa	Predicted RBP	12.91	□□□□□ -0.34
URH1	YDR400W	NOP53	Q12080	455 aa	Known RBP	12.88	□□□□□ -0.35
URH1	YDR400W	PTC3	P34221	468 aa	Known RBP	12.81	□□□□□ -0.36
URH1	YDR400W	VMA1	P17255	1071 aa	Known RBP	12.78	□□□□□ -0.36
URH1	YDR400W	TAF7	Q05021	590 aa		12.76	□□□□□ -0.37
URH1	YDR400W	PBS2	P08018	668 aa		12.75	□□□□□ -0.37
URH1	YDR400W	DSF2	P38213	736 aa		12.72	□□□□□ -0.37
URH1	YDR400W	RPN1	P38764	993 aa	Known RBP	12.72	□□□□□ -0.37
URH1	YDR400W	REF2	P42073	533 aa	Predicted RBP	12.69	□□□□□ -0.38
URH1	YDR400W	MST1	P07236	462 aa		12.68	□□□□□ -0.38
URH1	YDR400W	GRE2	Q12068	342 aa	Known RBP	12.62	□□□□□ -0.39
URH1	YDR400W	ATH1	P48016	1211 aa		12.61	□□□□□ -0.39
URH1	YDR400W	SAM3	Q08986	587 aa		12.61	□□□□□ -0.39
URH1	YDR400W	GTT3	P39996	337 aa		12.59	□□□□□ -0.39
URH1	YDR400W	MAM3	Q12296	706 aa		12.58	□□□□□ -0.4
URH1	YDR400W	GUT1	P32190	709 aa		12.56	□□□□□ -0.4
URH1	YDR400W	IES2	P40154	320 aa		12.54	□□□□□ -0.4
URH1	YDR400W	GYP5	Q12344	894 aa		12.54	□□□□□ -0.4
URH1	YDR400W	VHR2	P40041	505 aa		12.53	□□□□□ -0.4
URH1	YDR400W	COX6	P00427	148 aa		12.5	□□□□□ -0.41
URH1	YDR400W	MAK21	Q12176	1025 aa	Known RBP	12.49	□□□□□ -0.41
URH1	YDR400W	UBP14	P38237	781 aa	Known RBP	12.48	□□□□□ -0.41
URH1	YDR400W	YNR021W	P53723	404 aa	Known RBP	12.48	□□□□□ -0.41

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms