RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCF1	YDR135C	SGD1	Q06132	899 aa		4.65	□□□□□ -1.66
YCF1	YDR135C	RIM20	Q12033	661 aa		4.65	□□□□□ -1.66
YCF1	YDR135C	FKS3	Q04952	1785 aa		4.65	□□□□□ -1.66
YCF1	YDR135C	GSY2	P27472	705 aa		4.65	□□□□□ -1.67
YCF1	YDR135C	ATG9	Q12142	997 aa		4.65	□□□□□ -1.67
YCF1	YDR135C	AKL1	P38080	1108 aa	Known RBP	4.65	□□□□□ -1.67
YCF1	YDR135C	ORM2	Q06144	216 aa		4.65	□□□□□ -1.67
YCF1	YDR135C	TSR3	Q12094	313 aa	Known RBP	4.65	□□□□□ -1.67
YCF1	YDR135C	PUS1	Q12211	544 aa	Known RBP	4.65	□□□□□ -1.67
YCF1	YDR135C	GRX4	P32642	244 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	YDR338C	Q05497	695 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	COQ4	O13525	335 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	ECM32	P32644	1121 aa	Known RBP	4.64	□□□□□ -1.67
YCF1	YDR135C	TAN1	P53072	289 aa	Predicted RBP	4.64	□□□□□ -1.67
YCF1	YDR135C	UBC1	P21734	215 aa	Known RBP	4.64	□□□□□ -1.67
YCF1	YDR135C	NTH2	P35172	780 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	MAL33	P38157	468 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	YJR142W	P47173	342 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	YPT11	P48559	417 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	SAP1	P39955	897 aa	Known RBP	4.64	□□□□□ -1.67
YCF1	YDR135C	DNM1	P54861	757 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	PLP2	Q12017	286 aa		4.64	□□□□□ -1.67
YCF1	YDR135C	KTR3	P38130	404 aa	Predicted RBP	4.63	□□□□□ -1.67
YCF1	YDR135C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YCF1	YDR135C	BOP3	P53958	396 aa		4.63	□□□□□ -1.67
YCF1	YDR135C	TPS3	P38426	1054 aa	Known RBP	4.63	□□□□□ -1.67
YCF1	YDR135C	MRPS35	P53292	345 aa		4.63	□□□□□ -1.67
YCF1	YDR135C	OLA1	P38219	394 aa	Known RBP	4.63	□□□□□ -1.67
YCF1	YDR135C	BOI2	P39969	1040 aa		4.63	□□□□□ -1.67
YCF1	YDR135C	SLP1	Q12232	587 aa		4.63	□□□□□ -1.67
YCF1	YDR135C	GIN4	Q12263	1142 aa		4.63	□□□□□ -1.67
YCF1	YDR135C	PRP16	P15938	1071 aa	Predicted RBP	4.62	□□□□□ -1.67
YCF1	YDR135C	YBR287W	P38355	427 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	ZDS1	P50111	915 aa	Known RBP	4.62	□□□□□ -1.67
YCF1	YDR135C	ECM23	Q02710	187 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	TMA16	Q08687	178 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	BNI1	P41832	1953 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	CAF130	P53280	1122 aa	Predicted RBP	4.62	□□□□□ -1.67
YCF1	YDR135C	PET123	P17558	318 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	SEC14	P24280	304 aa	Known RBP	4.62	□□□□□ -1.67
YCF1	YDR135C	PTC4	P38089	393 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	HUL4	P40985	892 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	OSW7	P43611	510 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	MAL13	P53338	473 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	MCM4	P30665	933 aa	Known RBP	4.62	□□□□□ -1.67
YCF1	YDR135C	MAM1	P40065	302 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	SEC9	P40357	651 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	NNF2	P53253	936 aa		4.62	□□□□□ -1.67
YCF1	YDR135C	PHO13	P19881	312 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	SWC3	P31376	625 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	DPH5	P32469	300 aa	Predicted RBP	4.61	□□□□□ -1.67
YCF1	YDR135C	RAD16	P31244	790 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	UBP14	P38237	781 aa	Known RBP	4.61	□□□□□ -1.67
YCF1	YDR135C	YJR079W	P47126	109 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	ENT3	P47160	408 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	ALD2	P47771	506 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	GRX3	Q03835	250 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	ERV41	Q04651	352 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	DPB3	P27344	201 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	CDC15	P27636	974 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	RFT1	P38206	574 aa	Predicted RBP	4.61	□□□□□ -1.67
YCF1	YDR135C	CCT4	P39078	528 aa	Known RBP	4.61	□□□□□ -1.67
YCF1	YDR135C	CUS1	Q02554	436 aa	Predicted RBP	4.61	□□□□□ -1.67
YCF1	YDR135C	ELG1	Q12050	791 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	RMP1	Q12530	201 aa		4.61	□□□□□ -1.67
YCF1	YDR135C	CPS1	P27614	576 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	PUP2	P32379	260 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	HEL1	P36113	551 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	RIO2	P40160	425 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	PIB2	P53191	635 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	YDR306C	Q06640	478 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	RPO26	P20435	155 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	RRP1	P35178	278 aa	Predicted RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	ECM21	P38167	1117 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	RRM3	P38766	723 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	VMS1	Q04311	632 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	RRP15	Q06511	250 aa	Predicted RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	SDH5	Q08230	162 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	GAS4	Q08271	471 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	HSP82	P02829	709 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	PRP43	P53131	767 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	PXR1	P53335	271 aa	Predicted RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	RMD1	Q03441	430 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	YLR407W	Q06070	228 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	PMR1	P13586	950 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	PDB1	P32473	366 aa	Known RBP	4.6	□□□□□ -1.67
YCF1	YDR135C	VPS8	P39702	1274 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	MIC19	P43594	170 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	VPS75	P53853	264 aa		4.6	□□□□□ -1.67
YCF1	YDR135C	STO1	P34160	861 aa	Known RBP	4.59	□□□□□ -1.67
YCF1	YDR135C	PEX14	P53112	341 aa		4.59	□□□□□ -1.67
YCF1	YDR135C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YCF1	YDR135C	SHM1	P37292	490 aa	Predicted RBP	4.59	□□□□□ -1.67
YCF1	YDR135C	MTR4	P47047	1073 aa	Known RBP	4.59	□□□□□ -1.67
YCF1	YDR135C	ALF1	P53904	254 aa		4.59	□□□□□ -1.67
YCF1	YDR135C	VTC3	Q02725	835 aa		4.59	□□□□□ -1.67
YCF1	YDR135C	VPS30	Q02948	557 aa		4.59	□□□□□ -1.67
YCF1	YDR135C	RBA50	Q04418	439 aa		4.59	□□□□□ -1.67
YCF1	YDR135C	KRS1	P15180	591 aa	Known RBP	4.59	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 91 ms