RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeastyeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCF1YDR135C SPA2P23201 1466 aaKnown RBP6.61□□□□□ -1.35
YCF1YDR135C SGS1P35187 1447 aa6.49□□□□□ -1.37
YCF1YDR135C SSN2P38931 1420 aa6.48□□□□□ -1.37
YCF1YDR135C SKI3P17883 1432 aaKnown RBP6.27□□□□□ -1.41
YCF1YDR135C INO80P53115 1489 aa6.24□□□□□ -1.41
YCF1YDR135C NSR1P27476 414 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
YCF1YDR135C DRS1P32892 752 aaKnown RBP6.07□□□□□ -1.44
YCF1YDR135C CHD1P32657 1468 aa6.06□□□□□ -1.44
YCF1YDR135C NOP2P40991 618 aaKnown RBP6.04□□□□□ -1.44
YCF1YDR135C TY1B-DR4Q07793 1604 aa6.03□□□□□ -1.44
YCF1YDR135C MMS22Q06164 1454 aa6.02□□□□□ -1.45
YCF1YDR135C BFR2Q06631 534 aaKnown RBP6.01□□□□□ -1.45
YCF1YDR135C TCB3Q03640 1545 aaKnown RBP5.98□□□□□ -1.45
YCF1YDR135C XRN1P22147 1528 aaKnown RBP5.95□□□□□ -1.46
YCF1YDR135C UFD4P33202 1483 aa5.95□□□□□ -1.46
YCF1YDR135C HSL1P34244 1518 aa5.94□□□□□ -1.46
YCF1YDR135C MON2P48563 1636 aaPredicted RBP5.92□□□□□ -1.46
YCF1YDR135C HIR3P47171 1648 aa5.87□□□□□ -1.47
YCF1YDR135C SIN3P22579 1536 aa5.85□□□□□ -1.47
YCF1YDR135C RSE1Q04693 1361 aaKnown RBP5.84□□□□□ -1.47
YCF1YDR135C SSK2P53599 1579 aa5.84□□□□□ -1.48
YCF1YDR135C TRM732Q03496 1420 aa5.84□□□□□ -1.48
YCF1YDR135C THO2P53552 1597 aaKnown RBP5.83□□□□□ -1.48
YCF1YDR135C SPT6P23615 1451 aaKnown RBP5.83□□□□□ -1.48
YCF1YDR135C NUP170P38181 1502 aa5.83□□□□□ -1.48
YCF1YDR135C REV3P14284 1504 aa5.81□□□□□ -1.48
YCF1YDR135C STU1P38198 1513 aa5.8□□□□□ -1.48
YCF1YDR135C ESP1Q03018 1630 aa5.76□□□□□ -1.49
YCF1YDR135C MYO2P19524 1574 aaKnown RBP5.75□□□□□ -1.49
YCF1YDR135C BPT1P14772 1559 aa5.75□□□□□ -1.49
YCF1YDR135C SPP41P38904 1435 aa5.74□□□□□ -1.49
YCF1YDR135C POL1P13382 1468 aa5.73□□□□□ -1.49
YCF1YDR135C SCC2Q04002 1493 aa5.72□□□□□ -1.49
YCF1YDR135C IKI3Q06706 1349 aaKnown RBP5.72□□□□□ -1.49
YCF1YDR135C MLP2P40457 1679 aa5.71□□□□□ -1.5
YCF1YDR135C STH1P32597 1359 aa5.71□□□□□ -1.5
YCF1YDR135C ECM5Q03214 1411 aa5.68□□□□□ -1.5
YCF1YDR135C SSM4P40318 1319 aa5.68□□□□□ -1.5
YCF1YDR135C PDR10P51533 1564 aa5.67□□□□□ -1.5
YCF1YDR135C ENP1P38333 483 aaKnown RBP5.66□□□□□ -1.5
YCF1YDR135C PEP1P32319 1579 aa5.66□□□□□ -1.5
YCF1YDR135C EBP2P36049 427 aaKnown RBP5.62□□□□□ -1.51
YCF1YDR135C YTA7P40340 1379 aa5.62□□□□□ -1.51
YCF1YDR135C YPR148CQ06523 435 aa5.62□□□□□ -1.51
YCF1YDR135C TAF2P23255 1407 aa5.62□□□□□ -1.51
YCF1YDR135C YCF1P39109 1515 aaKnown RBP5.61□□□□□ -1.51
YCF1YDR135C DNA2P38859 1522 aa5.6□□□□□ -1.51
YCF1YDR135C MYO4P32492 1471 aa5.6□□□□□ -1.51
YCF1YDR135C YOR1P53049 1477 aa5.6□□□□□ -1.51
YCF1YDR135C SWR1Q05471 1514 aa5.6□□□□□ -1.51
YCF1YDR135C SPT7P35177 1332 aa5.6□□□□□ -1.51
YCF1YDR135C ATG2P53855 1592 aa5.59□□□□□ -1.51
YCF1YDR135C YPK9Q12697 1472 aa5.59□□□□□ -1.51
YCF1YDR135C TY1B-DR3Q99231 1755 aa5.59□□□□□ -1.51
YCF1YDR135C PRS1P32895 427 aaKnown RBP5.58□□□□□ -1.52
YCF1YDR135C RKR1Q04781 1562 aa5.58□□□□□ -1.52
YCF1YDR135C SNQ2P32568 1501 aaKnown RBP5.57□□□□□ -1.52
YCF1YDR135C TY3B-GQ99315 1547 aa5.57□□□□□ -1.52
YCF1YDR135C KOG1P38873 1557 aa5.57□□□□□ -1.52
YCF1YDR135C ULS1Q08562 1619 aa5.56□□□□□ -1.52
YCF1YDR135C TY2B-LR1P0C2J3 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-FP0CX63 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-GR2P0CX64 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-CP25384 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-DR2Q03494 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY1B-DR1Q03855 1755 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-DR3Q07791 1770 aaKnown RBP5.55□□□□□ -1.52
YCF1YDR135C TY2B-OR1Q12113 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-DR1Q12472 1770 aa5.55□□□□□ -1.52
YCF1YDR135C TY2B-OR2Q12501 1770 aa5.55□□□□□ -1.52
YCF1YDR135C CAB3P36076 571 aa5.55□□□□□ -1.52
YCF1YDR135C SAS10Q12136 610 aaPredicted RBP5.54□□□□□ -1.52
YCF1YDR135C ESC1Q03661 1658 aaKnown RBP5.54□□□□□ -1.52
YCF1YDR135C BUD4P47136 1447 aa5.54□□□□□ -1.52
YCF1YDR135C YLR419WQ06698 1435 aaKnown RBP5.53□□□□□ -1.52
YCF1YDR135C POL5P39985 1022 aaKnown RBP5.52□□□□□ -1.53
YCF1YDR135C PDR15Q04182 1529 aaKnown RBP5.52□□□□□ -1.53
YCF1YDR135C TY2B-BQ12491 1770 aa5.52□□□□□ -1.53
YCF1YDR135C SRB8P25648 1427 aa5.52□□□□□ -1.53
YCF1YDR135C YBT1P32386 1661 aa5.49□□□□□ -1.53
YCF1YDR135C SEC3P33332 1336 aaKnown RBP5.49□□□□□ -1.53
YCF1YDR135C TSC11P40061 1430 aa5.48□□□□□ -1.53
YCF1YDR135C CFT1Q06632 1357 aaKnown RBP5.48□□□□□ -1.53
YCF1YDR135C SMC4Q12267 1418 aa5.48□□□□□ -1.53
YCF1YDR135C GEA1P47102 1408 aaPredicted RBP5.47□□□□□ -1.53
YCF1YDR135C RPO31P04051 1460 aa5.47□□□□□ -1.53
YCF1YDR135C PAN1P32521 1480 aa5.45□□□□□ -1.54
YCF1YDR135C IME2P32581 645 aa5.45□□□□□ -1.54
YCF1YDR135C TOP2P06786 1428 aaKnown RBP5.44□□□□□ -1.54
YCF1YDR135C TY1B-HO13535 1793 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-DR5P0C2I2 1755 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-DR6P0C2I3 1755 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-LR2P0C2I5 1755 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-LR3P0C2I6 1755 aaKnown RBP5.44□□□□□ -1.54
YCF1YDR135C TY1B-PR1P0C2I9 1755 aaKnown RBP5.44□□□□□ -1.54
YCF1YDR135C TY1B-PR2P0C2J0 1756 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-PR3P0C2J1 1755 aaKnown RBP5.44□□□□□ -1.54
YCF1YDR135C TY1B-JR1P47098 1755 aa5.44□□□□□ -1.54
YCF1YDR135C TY1B-ML2Q03434 1755 aaKnown RBP5.44□□□□□ -1.54
YCF1YDR135C TY1B-ER1Q03612 1755 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms