RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W RSC1P53236 928 aa14.36□□□□□ -0.11
PTP1YDL230W ARP5P53946 755 aa14.36□□□□□ -0.11
PTP1YDL230W RAT1Q02792 1006 aaKnown RBP14.36□□□□□ -0.11
PTP1YDL230W THI3Q07471 609 aa14.36□□□□□ -0.11
PTP1YDL230W APC11Q12157 165 aa14.36□□□□□ -0.11
PTP1YDL230W PRX1P34227 261 aaKnown RBP14.35□□□□□ -0.11
PTP1YDL230W HYR1P40581 163 aaKnown RBP14.35□□□□□ -0.11
PTP1YDL230W PKH3Q03306 898 aaPredicted RBP14.35□□□□□ -0.11
PTP1YDL230W PEX19Q07418 342 aa14.35□□□□□ -0.11
PTP1YDL230W KEX1P09620 729 aa14.34□□□□□ -0.11
PTP1YDL230W MBR1P23493 339 aa14.33□□□□□ -0.12
PTP1YDL230W MGM1P32266 881 aa14.33□□□□□ -0.12
PTP1YDL230W IMP2'P32351 346 aa14.33□□□□□ -0.12
PTP1YDL230W RPN12P32496 274 aa14.33□□□□□ -0.12
PTP1YDL230W SRC1Q03707 834 aa14.33□□□□□ -0.12
PTP1YDL230W RIX7Q07844 837 aaKnown RBP14.33□□□□□ -0.12
PTP1YDL230W CPA2P03965 1118 aaKnown RBP14.32□□□□□ -0.12
PTP1YDL230W UBP1P25037 809 aa14.32□□□□□ -0.12
PTP1YDL230W BUD31P25337 157 aaPredicted RBP14.32□□□□□ -0.12
PTP1YDL230W DID4P36108 232 aa14.32□□□□□ -0.12
PTP1YDL230W GLO3P38682 493 aaKnown RBP14.32□□□□□ -0.12
PTP1YDL230W GLN1P32288 370 aaKnown RBP14.31□□□□□ -0.12
PTP1YDL230W KRE33P53914 1056 aaKnown RBP14.31□□□□□ -0.12
PTP1YDL230W PIF1P07271 859 aa14.3□□□□□ -0.12
PTP1YDL230W PEP3P27801 918 aa14.3□□□□□ -0.12
PTP1YDL230W RKM3P38222 552 aa14.3□□□□□ -0.12
PTP1YDL230W RPG1P38249 964 aaKnown RBP14.3□□□□□ -0.12
PTP1YDL230W PEX14P53112 341 aa14.3□□□□□ -0.12
PTP1YDL230W UTP22P53254 1237 aaPredicted RBP14.3□□□□□ -0.12
PTP1YDL230W KAR5Q04746 504 aa14.3□□□□□ -0.12
PTP1YDL230W ICP55P40051 511 aa14.29□□□□□ -0.12
PTP1YDL230W RSM25P40496 264 aa14.29□□□□□ -0.12
PTP1YDL230W YIR042CP40586 236 aa14.29□□□□□ -0.12
PTP1YDL230W CTH1P47976 325 aa14.29□□□□□ -0.12
PTP1YDL230W LCD1Q04377 747 aa14.29□□□□□ -0.12
PTP1YDL230W ESF1Q06344 628 aaKnown RBP14.29□□□□□ -0.12
PTP1YDL230W TAH18Q12181 623 aa14.29□□□□□ -0.12
PTP1YDL230W DPH6Q12429 685 aa14.29□□□□□ -0.12
PTP1YDL230W CAF20P12962 161 aaKnown RBP14.28□□□□□ -0.12
PTP1YDL230W FBP26P32604 452 aa14.28□□□□□ -0.12
PTP1YDL230W PMD1P32634 1753 aa14.28□□□□□ -0.12
PTP1YDL230W BDF1P35817 686 aa14.28□□□□□ -0.12
PTP1YDL230W TTI1P36097 1038 aa14.28□□□□□ -0.12
PTP1YDL230W ECM23Q02710 187 aa14.28□□□□□ -0.12
PTP1YDL230W INM2Q05533 292 aa14.28□□□□□ -0.12
PTP1YDL230W ELG1Q12050 791 aa14.28□□□□□ -0.12
PTP1YDL230W AIM44Q99299 758 aa14.28□□□□□ -0.12
PTP1YDL230W FRS2P15625 503 aaKnown RBP14.27□□□□□ -0.13
PTP1YDL230W MET1P36150 593 aa14.27□□□□□ -0.13
PTP1YDL230W GRX7P38068 203 aa14.27□□□□□ -0.13
PTP1YDL230W YKE2P52553 114 aa14.27□□□□□ -0.13
PTP1YDL230W BDF2Q07442 638 aa14.27□□□□□ -0.13
PTP1YDL230W YPL150WQ12152 901 aa14.27□□□□□ -0.13
PTP1YDL230W MATALPHA2P0CY08 210 aa14.26□□□□□ -0.13
PTP1YDL230W HMLALPHA2P0CY09 210 aa14.26□□□□□ -0.13
PTP1YDL230W RDS1P25611 832 aa14.26□□□□□ -0.13
PTP1YDL230W SYF1Q04048 859 aaPredicted RBP14.26□□□□□ -0.13
PTP1YDL230W DIB1Q06819 143 aaPredicted RBP14.26□□□□□ -0.13
PTP1YDL230W PSK2Q08217 1101 aa14.26□□□□□ -0.13
PTP1YDL230W PPM2Q08282 695 aa14.26□□□□□ -0.13
PTP1YDL230W YHL017WP38745 532 aa14.25□□□□□ -0.13
PTP1YDL230W CCT5P40413 562 aaKnown RBP14.25□□□□□ -0.13
PTP1YDL230W FRD1P32614 470 aaKnown RBP14.24□□□□□ -0.13
PTP1YDL230W ELM1P32801 640 aa14.24□□□□□ -0.13
PTP1YDL230W SKI2P35207 1287 aaKnown RBP RIP-Chip data14.24□□□□□ -0.13not detected
PTP1YDL230W SPL2P38839 148 aa14.24□□□□□ -0.13
PTP1YDL230W EPL1P43572 832 aa14.24□□□□□ -0.13
PTP1YDL230W IRC8P47046 822 aa14.24□□□□□ -0.13
PTP1YDL230W ENP2P48234 707 aaKnown RBP14.24□□□□□ -0.13
PTP1YDL230W PIL1P53252 339 aaKnown RBP14.24□□□□□ -0.13
PTP1YDL230W RPT4P53549 437 aaKnown RBP14.24□□□□□ -0.13
PTP1YDL230W HPC2Q01448 625 aa14.24□□□□□ -0.13
PTP1YDL230W SSF2Q12153 453 aaPredicted RBP14.24□□□□□ -0.13
PTP1YDL230W FAS2P19097 1887 aaKnown RBP14.23□□□□□ -0.13
PTP1YDL230W COQ1P18900 473 aa14.23□□□□□ -0.13
PTP1YDL230W MAL33P38157 468 aa14.23□□□□□ -0.13
PTP1YDL230W TOS1P38288 455 aa14.23□□□□□ -0.13
PTP1YDL230W RFC5P38251 354 aa14.22□□□□□ -0.13
PTP1YDL230W RPN1P38764 993 aaKnown RBP14.22□□□□□ -0.13
PTP1YDL230W NUG1P40010 520 aaKnown RBP14.22□□□□□ -0.13
PTP1YDL230W YLR407WQ06070 228 aa14.22□□□□□ -0.13
PTP1YDL230W CHO2P05374 869 aaKnown RBP14.21□□□□□ -0.13
PTP1YDL230W RPT3P33298 428 aaKnown RBP14.21□□□□□ -0.13
PTP1YDL230W RER2P35196 286 aa14.2□□□□□ -0.14
PTP1YDL230W CRG1P38892 291 aaRIP-Chip data14.2□□□□□ -0.14not detected
PTP1YDL230W BUD6P41697 788 aa14.2□□□□□ -0.14
PTP1YDL230W ALD3P54114 506 aa14.2□□□□□ -0.14
PTP1YDL230W IRC4Q03036 179 aa14.2□□□□□ -0.14
PTP1YDL230W SPN1Q06505 410 aaPredicted RBP14.2□□□□□ -0.14
PTP1YDL230W TRS33Q99394 268 aa14.2□□□□□ -0.14
PTP1YDL230W NPR3P38742 1146 aa14.19□□□□□ -0.14
PTP1YDL230W SSL2Q00578 843 aa14.19□□□□□ -0.14
PTP1YDL230W LCB1P25045 558 aaKnown RBP14.18□□□□□ -0.14
PTP1YDL230W MCM2P29469 868 aa14.18□□□□□ -0.14
PTP1YDL230W IRC3Q06683 689 aa14.18□□□□□ -0.14
PTP1YDL230W FIG2P25653 1609 aa14.18□□□□□ -0.14
PTP1YDL230W RRP8P38961 392 aaKnown RBP14.17□□□□□ -0.14
PTP1YDL230W IOC3P43596 787 aa14.17□□□□□ -0.14
PTP1YDL230W HDA1P53973 706 aa14.17□□□□□ -0.14
PTP1YDL230W SAS4Q04003 481 aa14.17□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms